| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146342621
Identifier: 146342621
GI number: 146342621
Start: 5988254
End: 5989309
Strand: Reverse
Name: 146342621
Synonym: BRADO5786
Alternate gene names: NA
Gene position: 5989309-5988254 (Counterclockwise)
Preceding gene: 146342622
Following gene: 146342620
Centisome position: 80.32
GC content: 66.19
Gene sequence:
>1056_bases ATGTCCTATACCGAAACCGACCTCCGCGCCGCATCGAGCGCTGGTGCCATCAGCCCCGACGAGCTACAGCGCCTGCTCGC CTATCTCCACCAGCGCGCCCCGTCCACCGACACGCCTCGCGCCCAGTTCGATGCCGCCCATCTGCTCTGGTACGCCGGCG CGCTGATCGTGATCGGCGCCATGGGCCTGTTCTCGACGGTGGCCTTCTCGCAGTTGGGCGGCCGCGCTTTGACCGCCTGC GCATTCGCTTACGCCGCAGCCTTCGGCTTCGCCGGCGACCACCTCTGGCGCCGGAGCCTGCGCGTCCCCGGCGGCCTCCT GATCGCCATCGCCGTCTCGATGGCGCCGCTCGCCGTCTACGGCATTCAAGCCGAGTTCGGCTGGTGGGGCAGGTTCGGCA AGCCCGGCACGGTCCAGGAATTCTATGTCTGGATCAAGGGCAGCTGGCTGTTCATGGAGATCGCCACCGTCGCGGCAGGC AGCATCGCGCTGCGCTTCTACCGCGTGCCCTTCATCGTCGCGATCATCTCGGTCGCGCTGTGGTTCATGTCGATGGACCT GACGCCCTGGATCTTCAACGTCAGCCATTTCGACTGGGAGATGCGCCGCGTCGTGTCGATCTGGTTGGGCCTCGGCATCC TCGTGACGGCCTGGATCGTCGACTACACCAGCAAAAGCCGCGACTTCGGCTTCTGGCTGCACCTGTTCGGCCTGGTGGCG TTCTGGGGCGGCATCTCCGCCACCGACGGCGCCACCGAGCTCGGCAAGGCGATCTACTGCCTCCTGAACGTGGGCCTGCT CCTGATTGCCGTCCTCATCGTCCGCCGCGCCTACGCCGTGTTCGGCGCTGTGGGCATCACGATGTATCTCGGCCACCTCG CCGACGCCGTCTTCAAGGACTCGCTGCTGTTCCCGTTCGCGCTGTCCCTGATCGGCGTTGCGGTGGTCGCGGCGGGACTG GCGTATTACCGGAAGCAGAAGGTGATTGCGGAATGGCTCACGGCAAATCTACCAGTGTCCCTGCTGCGGCTGCGGCCGAA TGAGGCGTTCGGCTGA
Upstream 100 bases:
>100_bases TACACTCACCCTCATCCGCCACGCCGGCATCGGCCCGTGACCCGCAACGCAGCAGCGTTGGCGCGATCGGACCCGCGGCG GACCATTCAAGGTGACCACC
Downstream 100 bases:
>100_bases AGCGCTATCTACGATGATTGCTGCGCCGTCTTTCTAGACGCCTGTGCCCGGCGGGGTCCGCAGGAAGTGGTCGGCGTTGC AGCCTCAGCAATATGGAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 351; Mature: 350
Protein sequence:
>351_residues MSYTETDLRAASSAGAISPDELQRLLAYLHQRAPSTDTPRAQFDAAHLLWYAGALIVIGAMGLFSTVAFSQLGGRALTAC AFAYAAAFGFAGDHLWRRSLRVPGGLLIAIAVSMAPLAVYGIQAEFGWWGRFGKPGTVQEFYVWIKGSWLFMEIATVAAG SIALRFYRVPFIVAIISVALWFMSMDLTPWIFNVSHFDWEMRRVVSIWLGLGILVTAWIVDYTSKSRDFGFWLHLFGLVA FWGGISATDGATELGKAIYCLLNVGLLLIAVLIVRRAYAVFGAVGITMYLGHLADAVFKDSLLFPFALSLIGVAVVAAGL AYYRKQKVIAEWLTANLPVSLLRLRPNEAFG
Sequences:
>Translated_351_residues MSYTETDLRAASSAGAISPDELQRLLAYLHQRAPSTDTPRAQFDAAHLLWYAGALIVIGAMGLFSTVAFSQLGGRALTAC AFAYAAAFGFAGDHLWRRSLRVPGGLLIAIAVSMAPLAVYGIQAEFGWWGRFGKPGTVQEFYVWIKGSWLFMEIATVAAG SIALRFYRVPFIVAIISVALWFMSMDLTPWIFNVSHFDWEMRRVVSIWLGLGILVTAWIVDYTSKSRDFGFWLHLFGLVA FWGGISATDGATELGKAIYCLLNVGLLLIAVLIVRRAYAVFGAVGITMYLGHLADAVFKDSLLFPFALSLIGVAVVAAGL AYYRKQKVIAEWLTANLPVSLLRLRPNEAFG >Mature_350_residues SYTETDLRAASSAGAISPDELQRLLAYLHQRAPSTDTPRAQFDAAHLLWYAGALIVIGAMGLFSTVAFSQLGGRALTACA FAYAAAFGFAGDHLWRRSLRVPGGLLIAIAVSMAPLAVYGIQAEFGWWGRFGKPGTVQEFYVWIKGSWLFMEIATVAAGS IALRFYRVPFIVAIISVALWFMSMDLTPWIFNVSHFDWEMRRVVSIWLGLGILVTAWIVDYTSKSRDFGFWLHLFGLVAF WGGISATDGATELGKAIYCLLNVGLLLIAVLIVRRAYAVFGAVGITMYLGHLADAVFKDSLLFPFALSLIGVAVVAAGLA YYRKQKVIAEWLTANLPVSLLRLRPNEAFG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38453; Mature: 38322
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYTETDLRAASSAGAISPDELQRLLAYLHQRAPSTDTPRAQFDAAHLLWYAGALIVIGA CCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH MGLFSTVAFSQLGGRALTACAFAYAAAFGFAGDHLWRRSLRVPGGLLIAIAVSMAPLAVY HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHE GIQAEFGWWGRFGKPGTVQEFYVWIKGSWLFMEIATVAAGSIALRFYRVPFIVAIISVAL EEEECCCCCCCCCCCCCHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WFMSMDLTPWIFNVSHFDWEMRRVVSIWLGLGILVTAWIVDYTSKSRDFGFWLHLFGLVA HHHHHCCCHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH FWGGISATDGATELGKAIYCLLNVGLLLIAVLIVRRAYAVFGAVGITMYLGHLADAVFKD HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLLFPFALSLIGVAVVAAGLAYYRKQKVIAEWLTANLPVSLLRLRPNEAFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEECCCCCCC >Mature Secondary Structure SYTETDLRAASSAGAISPDELQRLLAYLHQRAPSTDTPRAQFDAAHLLWYAGALIVIGA CCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH MGLFSTVAFSQLGGRALTACAFAYAAAFGFAGDHLWRRSLRVPGGLLIAIAVSMAPLAVY HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHE GIQAEFGWWGRFGKPGTVQEFYVWIKGSWLFMEIATVAAGSIALRFYRVPFIVAIISVAL EEEECCCCCCCCCCCCCHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WFMSMDLTPWIFNVSHFDWEMRRVVSIWLGLGILVTAWIVDYTSKSRDFGFWLHLFGLVA HHHHHCCCHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH FWGGISATDGATELGKAIYCLLNVGLLLIAVLIVRRAYAVFGAVGITMYLGHLADAVFKD HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLLFPFALSLIGVAVVAAGLAYYRKQKVIAEWLTANLPVSLLRLRPNEAFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA