| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146342586
Identifier: 146342586
GI number: 146342586
Start: 5944826
End: 5945965
Strand: Reverse
Name: 146342586
Synonym: BRADO5749
Alternate gene names: NA
Gene position: 5945965-5944826 (Counterclockwise)
Preceding gene: 146342588
Following gene: 146342583
Centisome position: 79.74
GC content: 65.96
Gene sequence:
>1140_bases GTGACACCGTTCGCTGCGGCGAGCGTGATCATCCTCATGGCGGGCACCAGCGCGGTGACGCCGCTCTACCGGATCTATCA GCAGACGATGAATCTGACCCCGTTCTGGATCACGGTCGTTTTCGCAAGCTATGTCGTCAGCCTGCTCGCGGCCCTGCTGA CTGTCGGCGGCCTTTCCGATTATGTCGGTCGCCGGCCCGTGATGCTGGCTGCGCTGCTGATCAACGCCGCGGCCATGATG ATCTTTGCGGAGGCGGACAGCCTCTGGCAGCTGATCGCCGCGCGGATGGTGCAGGGCCTGAGCGTTGGCATCGGCACGAC GGCGTTCGGCGCCGCCATTCTCGACACCAGCCGCACTCGCGGACCGCTGCTGAACAGCGTCGCGGCATTTCTCGGCATGA CAGCCGGCGCGCTGGTGAGCGCGACGCTGATCGTGTTCGTTCCCGATCCGCTGCATGCCGTCTACGTCGTGGTGCTCGCC TTCACCCTGCTGATGCTGCTTCTGCTCGTGGTCATGCCGGAGAGCTGCACGCCCAAGGATGGTGCCTGGGCTTCGCTTCG CCCGCATGTCGCGGTGCCCCCGCAGTCACAGCCGGTGCTCGCGAGACTGACGCCGGCCAATGTGGGGGCCTGGTCGCTTG GCGGGTTCTATCTGTCGCTGATGCCGACCGTTGTCGCGACCGCGATGAAAGTTGCCTCGCCGTGGATCGGAGGGCTCGTC GTGTCGGCGTTGATGCTGACCGCCGCGCTCGCAGTGGCGGTGTTTCGCCATTGGCCGGCCCGCCGCCTCGTCCTCGCAGG TGCCAGCACGGTGCCGGTTGGTGTTGCCATCTCGATGATCGGGATTCAGCAGCAACACGTGCTGGCGCTACTGGCCGGCA CGATCATCGCGGGCGCCGGCTTTGGCGCGAGCTTTTCCGGAACGCTGCGCGCCTTGCTGCCGACGGCGCACGCTCACGAG CGCGCCGGCTTGCTCTCGGCGTTCTATCTGCAGTCCTATCTGGCCTTTGCCGTCCCCGCCGTCGCGGCAGGACTATCTGT GCCGCTGATCGGCCTGTCGCTCGTGGCCTACATCTACGGTGCCGTCATCATCGTGCTGACGATCGTATCGGGCATCGCAA CGCTGATGTCCAAGGGCTGA
Upstream 100 bases:
>100_bases CATGCAAGGCTGTCCGACCGGTGCCTCCGCTGCGACGTCGACCGCCAACCAGGAGCCGACAGCTTCAAAGCGCGCCCTCT GGTCGTTGCCGCTGGGAGCC
Downstream 100 bases:
>100_bases AAGGTGCCGGCGGCACCGCCAGCCCTCGGCGCATCCGAGGTTTAGACCTCTCTGCGGCTGAGGAAGGCGAGCCGCTCGAA CAGGTGCACGTCCTGCTCGT
Product: major facilitator superfamily permease
Products: NA
Alternate protein names: Mutlidrug Resistance Protein; Facilitator Superfamily Protein; Facilitator Superfamily Transporter; Multidrug Resistance Protein; Drug Resistance Efflux Protein; Facilitator Superfamily; ABC Transporter Membrane Protein; Transmembrane Efflux Protein; Facilitator Superfamily Transporter Permease; General Substrate Transporter; Facilitator Family Protein; Multidrug-Efflux MFS Permease; Facilitator Superfamily Permease
Number of amino acids: Translated: 379; Mature: 378
Protein sequence:
>379_residues MTPFAAASVIILMAGTSAVTPLYRIYQQTMNLTPFWITVVFASYVVSLLAALLTVGGLSDYVGRRPVMLAALLINAAAMM IFAEADSLWQLIAARMVQGLSVGIGTTAFGAAILDTSRTRGPLLNSVAAFLGMTAGALVSATLIVFVPDPLHAVYVVVLA FTLLMLLLLVVMPESCTPKDGAWASLRPHVAVPPQSQPVLARLTPANVGAWSLGGFYLSLMPTVVATAMKVASPWIGGLV VSALMLTAALAVAVFRHWPARRLVLAGASTVPVGVAISMIGIQQQHVLALLAGTIIAGAGFGASFSGTLRALLPTAHAHE RAGLLSAFYLQSYLAFAVPAVAAGLSVPLIGLSLVAYIYGAVIIVLTIVSGIATLMSKG
Sequences:
>Translated_379_residues MTPFAAASVIILMAGTSAVTPLYRIYQQTMNLTPFWITVVFASYVVSLLAALLTVGGLSDYVGRRPVMLAALLINAAAMM IFAEADSLWQLIAARMVQGLSVGIGTTAFGAAILDTSRTRGPLLNSVAAFLGMTAGALVSATLIVFVPDPLHAVYVVVLA FTLLMLLLLVVMPESCTPKDGAWASLRPHVAVPPQSQPVLARLTPANVGAWSLGGFYLSLMPTVVATAMKVASPWIGGLV VSALMLTAALAVAVFRHWPARRLVLAGASTVPVGVAISMIGIQQQHVLALLAGTIIAGAGFGASFSGTLRALLPTAHAHE RAGLLSAFYLQSYLAFAVPAVAAGLSVPLIGLSLVAYIYGAVIIVLTIVSGIATLMSKG >Mature_378_residues TPFAAASVIILMAGTSAVTPLYRIYQQTMNLTPFWITVVFASYVVSLLAALLTVGGLSDYVGRRPVMLAALLINAAAMMI FAEADSLWQLIAARMVQGLSVGIGTTAFGAAILDTSRTRGPLLNSVAAFLGMTAGALVSATLIVFVPDPLHAVYVVVLAF TLLMLLLLVVMPESCTPKDGAWASLRPHVAVPPQSQPVLARLTPANVGAWSLGGFYLSLMPTVVATAMKVASPWIGGLVV SALMLTAALAVAVFRHWPARRLVLAGASTVPVGVAISMIGIQQQHVLALLAGTIIAGAGFGASFSGTLRALLPTAHAHER AGLLSAFYLQSYLAFAVPAVAAGLSVPLIGLSLVAYIYGAVIIVLTIVSGIATLMSKG
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39190; Mature: 39059
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPFAAASVIILMAGTSAVTPLYRIYQQTMNLTPFWITVVFASYVVSLLAALLTVGGLSD CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHH YVGRRPVMLAALLINAAAMMIFAEADSLWQLIAARMVQGLSVGIGTTAFGAAILDTSRTR HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCC GPLLNSVAAFLGMTAGALVSATLIVFVPDPLHAVYVVVLAFTLLMLLLLVVMPESCTPKD CHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GAWASLRPHVAVPPQSQPVLARLTPANVGAWSLGGFYLSLMPTVVATAMKVASPWIGGLV CCCCCCCCCEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH VSALMLTAALAVAVFRHWPARRLVLAGASTVPVGVAISMIGIQQQHVLALLAGTIIAGAG HHHHHHHHHHHHHHHHHCCHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC FGASFSGTLRALLPTAHAHERAGLLSAFYLQSYLAFAVPAVAAGLSVPLIGLSLVAYIYG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH AVIIVLTIVSGIATLMSKG HHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TPFAAASVIILMAGTSAVTPLYRIYQQTMNLTPFWITVVFASYVVSLLAALLTVGGLSD CCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHH YVGRRPVMLAALLINAAAMMIFAEADSLWQLIAARMVQGLSVGIGTTAFGAAILDTSRTR HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCC GPLLNSVAAFLGMTAGALVSATLIVFVPDPLHAVYVVVLAFTLLMLLLLVVMPESCTPKD CHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GAWASLRPHVAVPPQSQPVLARLTPANVGAWSLGGFYLSLMPTVVATAMKVASPWIGGLV CCCCCCCCCEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH VSALMLTAALAVAVFRHWPARRLVLAGASTVPVGVAISMIGIQQQHVLALLAGTIIAGAG HHHHHHHHHHHHHHHHHCCHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC FGASFSGTLRALLPTAHAHERAGLLSAFYLQSYLAFAVPAVAAGLSVPLIGLSLVAYIYG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH AVIIVLTIVSGIATLMSKG HHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA