| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is sseA [H]
Identifier: 146342581
GI number: 146342581
Start: 5940792
End: 5941649
Strand: Reverse
Name: sseA [H]
Synonym: BRADO5744
Alternate gene names: 146342581
Gene position: 5941649-5940792 (Counterclockwise)
Preceding gene: 146342582
Following gene: 146342579
Centisome position: 79.68
GC content: 68.3
Gene sequence:
>858_bases ATGACTACCCCCAACGACCCGCTCGTCTCCACGGACTGGCTCGCAGCGCATCTCGACGATCCCAAGATCAAGGTGCTCGA CGCCACCTTCAAGATGCCCGGCGTGCTGCCGCTGCCGAAGGACGACTATCTGAAGGCGCACATTCCCGGCGCGGTGTTCT TCGACGTCGACGAGGTCTCCGATCATTCCAATCCGCTGCCGCACATGTATCCGAGCGCGGATCAGTTCGGCCGTGATGCG GCACGGCTCGGCGTCAGCAACGATGACACCGTGGTGGTCTACGATGCCGGCGGCTGGGTCGCCGCGCCGCGCGCCTGGTG GATGTTCCTGTCGTTCGGCCACAAGGACGTTCGCGTGCTCGACGGCGGCCTGAAGAAGTGGATCGCCGAGGGCAGGCCGG TCGACAGCGGGCAGGTGACCCCTGCGGCCGGCACCTACATCGCAAGCTTAGACGCCGCGCGTGTGCGCAAGGTCGAGCAG ATGGTCGCGAACCTCACCGGCGGCGCCGAGCAGGTGATCGACGCCCGGCAGGCGCCGCGCTTTGCCGGCGAGGTGGCCGA GCCCCGGCCCGGCCTGCGCTCCGGCCACATTCCGGGCAGCCGCAATCTGCCTTATGCGGAACTGTTCGATGCCGCCACCG GCGTCATGAAGCCGCTCGATGAGCTTCGCAAGGCATTCGGCGCAGCCGGCGTCGATCTCGGCAAGCCGATCGTGACCTCG TGCGGGTCGGGTGTCTCGGCAGCGGTGCTGACGCTGGCGCTCTACCGGCTCGGTCTGCGCGACACCGCGCTCTACGACGG CTCCTGGTCGGAATGGGGCGTCGAGAACGGGCCGCCGGTCGCAACCGGGCCAGCCTGA
Upstream 100 bases:
>100_bases GTCACACGCGGGCTTGACCCGCGTGTCTATCGCTTCGACAAGATGGATCGCCGGATCAAGTCCGGCGATGACGAATGTGA AGTGATGCTGGAGCCAGGCC
Downstream 100 bases:
>100_bases TCATCGCCTCTATCGCGTGCGCGGTCCGGCGGCCTGCTGGCCGATCGCTGCCGGCTGAGCGAACTGCTGGCTGAACGGAT CGGGGAAGGCTTGCTGTTGC
Product: 3-mercaptopyruvate sulfurtransferase
Products: NA
Alternate protein names: MST; Rhodanese-like protein [H]
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MTTPNDPLVSTDWLAAHLDDPKIKVLDATFKMPGVLPLPKDDYLKAHIPGAVFFDVDEVSDHSNPLPHMYPSADQFGRDA ARLGVSNDDTVVVYDAGGWVAAPRAWWMFLSFGHKDVRVLDGGLKKWIAEGRPVDSGQVTPAAGTYIASLDAARVRKVEQ MVANLTGGAEQVIDARQAPRFAGEVAEPRPGLRSGHIPGSRNLPYAELFDAATGVMKPLDELRKAFGAAGVDLGKPIVTS CGSGVSAAVLTLALYRLGLRDTALYDGSWSEWGVENGPPVATGPA
Sequences:
>Translated_285_residues MTTPNDPLVSTDWLAAHLDDPKIKVLDATFKMPGVLPLPKDDYLKAHIPGAVFFDVDEVSDHSNPLPHMYPSADQFGRDA ARLGVSNDDTVVVYDAGGWVAAPRAWWMFLSFGHKDVRVLDGGLKKWIAEGRPVDSGQVTPAAGTYIASLDAARVRKVEQ MVANLTGGAEQVIDARQAPRFAGEVAEPRPGLRSGHIPGSRNLPYAELFDAATGVMKPLDELRKAFGAAGVDLGKPIVTS CGSGVSAAVLTLALYRLGLRDTALYDGSWSEWGVENGPPVATGPA >Mature_284_residues TTPNDPLVSTDWLAAHLDDPKIKVLDATFKMPGVLPLPKDDYLKAHIPGAVFFDVDEVSDHSNPLPHMYPSADQFGRDAA RLGVSNDDTVVVYDAGGWVAAPRAWWMFLSFGHKDVRVLDGGLKKWIAEGRPVDSGQVTPAAGTYIASLDAARVRKVEQM VANLTGGAEQVIDARQAPRFAGEVAEPRPGLRSGHIPGSRNLPYAELFDAATGVMKPLDELRKAFGAAGVDLGKPIVTSC GSGVSAAVLTLALYRLGLRDTALYDGSWSEWGVENGPPVATGPA
Specific function: Transfers a sulfur ion to cyanide or to other thiol compounds. Also has weak rhodanese activity. Its participation in detoxification of cyanide may be small. May be involved in the enhancement of serine sensitivity [H]
COG id: COG2897
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 rhodanese domains [H]
Homologues:
Organism=Homo sapiens, GI194473668, Length=277, Percent_Identity=41.8772563176895, Blast_Score=226, Evalue=2e-59, Organism=Homo sapiens, GI61835204, Length=277, Percent_Identity=41.8772563176895, Blast_Score=225, Evalue=3e-59, Organism=Homo sapiens, GI194473681, Length=277, Percent_Identity=41.8772563176895, Blast_Score=225, Evalue=3e-59, Organism=Homo sapiens, GI17402865, Length=281, Percent_Identity=42.7046263345196, Blast_Score=213, Evalue=2e-55, Organism=Escherichia coli, GI87082121, Length=274, Percent_Identity=45.985401459854, Blast_Score=241, Evalue=5e-65, Organism=Escherichia coli, GI87081967, Length=271, Percent_Identity=29.1512915129151, Blast_Score=94, Evalue=9e-21, Organism=Caenorhabditis elegans, GI17561888, Length=295, Percent_Identity=30.5084745762712, Blast_Score=115, Evalue=2e-26, Organism=Caenorhabditis elegans, GI71997283, Length=294, Percent_Identity=28.9115646258503, Blast_Score=112, Evalue=3e-25, Organism=Caenorhabditis elegans, GI115534702, Length=240, Percent_Identity=30.8333333333333, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17543836, Length=291, Percent_Identity=30.2405498281787, Blast_Score=95, Evalue=3e-20, Organism=Caenorhabditis elegans, GI17543838, Length=291, Percent_Identity=30.2405498281787, Blast_Score=95, Evalue=3e-20, Organism=Caenorhabditis elegans, GI17559150, Length=273, Percent_Identity=28.2051282051282, Blast_Score=91, Evalue=6e-19, Organism=Saccharomyces cerevisiae, GI6324825, Length=276, Percent_Identity=34.4202898550725, Blast_Score=156, Evalue=4e-39,
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001763 - InterPro: IPR001307 [H]
Pfam domain/function: PF00581 Rhodanese [H]
EC number: =2.8.1.2 [H]
Molecular weight: Translated: 30355; Mature: 30223
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: PS00380 RHODANESE_1 ; PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPNDPLVSTDWLAAHLDDPKIKVLDATFKMPGVLPLPKDDYLKAHIPGAVFFDVDEVS CCCCCCCCCCCCHHEEECCCCCEEEEEEEECCCCCCCCCCCCCEEEECCCEEEEEHHHHC DHSNPLPHMYPSADQFGRDAARLGVSNDDTVVVYDAGGWVAAPRAWWMFLSFGHKDVRVL CCCCCCCCCCCCHHHHCCHHHHCCCCCCCEEEEEECCCCEECCHHHHHHHHCCCCCHHHH DGGLKKWIAEGRPVDSGQVTPAAGTYIASLDAARVRKVEQMVANLTGGAEQVIDARQAPR HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCH FAGEVAEPRPGLRSGHIPGSRNLPYAELFDAATGVMKPLDELRKAFGAAGVDLGKPIVTS HHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH CGSGVSAAVLTLALYRLGLRDTALYDGSWSEWGVENGPPVATGPA CCCCHHHHHHHHHHHHHCCCHHEEECCCCHHCCCCCCCCCCCCCC >Mature Secondary Structure TTPNDPLVSTDWLAAHLDDPKIKVLDATFKMPGVLPLPKDDYLKAHIPGAVFFDVDEVS CCCCCCCCCCCHHEEECCCCCEEEEEEEECCCCCCCCCCCCCEEEECCCEEEEEHHHHC DHSNPLPHMYPSADQFGRDAARLGVSNDDTVVVYDAGGWVAAPRAWWMFLSFGHKDVRVL CCCCCCCCCCCCHHHHCCHHHHCCCCCCCEEEEEECCCCEECCHHHHHHHHCCCCCHHHH DGGLKKWIAEGRPVDSGQVTPAAGTYIASLDAARVRKVEQMVANLTGGAEQVIDARQAPR HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCH FAGEVAEPRPGLRSGHIPGSRNLPYAELFDAATGVMKPLDELRKAFGAAGVDLGKPIVTS HHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH CGSGVSAAVLTLALYRLGLRDTALYDGSWSEWGVENGPPVATGPA CCCCHHHHHHHHHHHHHCCCHHEEECCCCHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]