Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is bfr [H]
Identifier: 146342568
GI number: 146342568
Start: 5930239
End: 5930724
Strand: Reverse
Name: bfr [H]
Synonym: BRADO5731
Alternate gene names: 146342568
Gene position: 5930724-5930239 (Counterclockwise)
Preceding gene: 146342569
Following gene: 146342560
Centisome position: 79.54
GC content: 59.26
Gene sequence:
>486_bases ATGCAGGGCGACCCCAAGGTCATCGAATATCTCAACAAGGGATTGCGCAGCGAACTGACTGCCATCAACCAATATTGGCT GCACTACCGCCTGCTGAACAATTGGGGCCTTTTGGAAATGGCGAAGGTCTGGCGCAAGGAATCCATCGAGGAGATGGAGC ACGCCGACAAGTTCACGGACCGCATCCTCTTCCTCGACGGCTTCCCGAACATGCAGGTGCTCGATCCCCTGCGCATCGGC CAGAACGTCAAGGAGATCATCGAGTGCGATCTCGCCGCCGAGATCGGCGCGCGGACGCTCTACCAGGAAGCCGCAACCTA CTGCCACGGCGTCAAGGACTACGTGTCGCGCGATCTGTTCGAGCAGCTGATGAAGGACGAGGAGCATCACATCGACTTCC TCGAGACGCAGCTCGATCTGATCGGCCGTATCGGCCTCGAGCTCTATACCCAGAAGCACGTCGGCGGGCTCGAGAGCGAG CACTGA
Upstream 100 bases:
>100_bases GCCTGCTTACGCCCCAAAAATGCACATGAACGGGGGTCGTCTCCGCACTTCGAACCTGTTATTGAGCGCCTGCGGCCTCT AACTCTTTCGGAGCTTATCT
Downstream 100 bases:
>100_bases CCAACGCATCTCTCCTCCTTGGGGCGAGGTCGATTCGGGGCCGAGACCAGACCTTGAATCGACCGCCCGGCTTCCGAACG CCGGCAGTGGCGGACGCGGA
Product: bacterioferritin
Products: NA
Alternate protein names: BFR [H]
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MQGDPKVIEYLNKGLRSELTAINQYWLHYRLLNNWGLLEMAKVWRKESIEEMEHADKFTDRILFLDGFPNMQVLDPLRIG QNVKEIIECDLAAEIGARTLYQEAATYCHGVKDYVSRDLFEQLMKDEEHHIDFLETQLDLIGRIGLELYTQKHVGGLESE H
Sequences:
>Translated_161_residues MQGDPKVIEYLNKGLRSELTAINQYWLHYRLLNNWGLLEMAKVWRKESIEEMEHADKFTDRILFLDGFPNMQVLDPLRIG QNVKEIIECDLAAEIGARTLYQEAATYCHGVKDYVSRDLFEQLMKDEEHHIDFLETQLDLIGRIGLELYTQKHVGGLESE H >Mature_161_residues MQGDPKVIEYLNKGLRSELTAINQYWLHYRLLNNWGLLEMAKVWRKESIEEMEHADKFTDRILFLDGFPNMQVLDPLRIG QNVKEIIECDLAAEIGARTLYQEAATYCHGVKDYVSRDLFEQLMKDEEHHIDFLETQLDLIGRIGLELYTQKHVGGLESE H
Specific function: May perform analogous functions in iron detoxification and storage to that of animal ferritins [H]
COG id: COG2193
COG function: function code P; Bacterioferritin (cytochrome b1)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ferritin-like diiron domain [H]
Homologues:
Organism=Escherichia coli, GI1789733, Length=155, Percent_Identity=53.5483870967742, Blast_Score=161, Evalue=2e-41,
Paralogues:
None
Copy number: 1639 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002024 - InterPro: IPR009040 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR008331 [H]
Pfam domain/function: PF00210 Ferritin [H]
EC number: NA
Molecular weight: Translated: 18851; Mature: 18851
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: PS50905 FERRITIN_LIKE ; PS00549 BACTERIOFERRITIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQGDPKVIEYLNKGLRSELTAINQYWLHYRLLNNWGLLEMAKVWRKESIEEMEHADKFTD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH RILFLDGFPNMQVLDPLRIGQNVKEIIECDLAAEIGARTLYQEAATYCHGVKDYVSRDLF HEEEECCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EQLMKDEEHHIDFLETQLDLIGRIGLELYTQKHVGGLESEH HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MQGDPKVIEYLNKGLRSELTAINQYWLHYRLLNNWGLLEMAKVWRKESIEEMEHADKFTD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH RILFLDGFPNMQVLDPLRIGQNVKEIIECDLAAEIGARTLYQEAATYCHGVKDYVSRDLF HEEEECCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EQLMKDEEHHIDFLETQLDLIGRIGLELYTQKHVGGLESEH HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7698330; 11756688 [H]