| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146342175
Identifier: 146342175
GI number: 146342175
Start: 5541231
End: 5542427
Strand: Reverse
Name: 146342175
Synonym: BRADO5325
Alternate gene names: NA
Gene position: 5542427-5541231 (Counterclockwise)
Preceding gene: 146342179
Following gene: 146342173
Centisome position: 74.33
GC content: 62.32
Gene sequence:
>1197_bases TTGGAAGGCGAATGCGGGATCAACCTCCGGACGAGGCTCAGCTTGATGGCAGGTGATCCAGAGCTGGCGAAGACCAGCAT CGTCGGCGAAGCAACGGACGCACATCGCGACTTGAGGATCGACGCATGCCGCGGTCTGGCGCTGTGGTTCATCTTTGTCG ATCACGTGCCGGACAATTCGCTGGCGTGGCTGACATTGCGGAACTACGGTTTCAGCGACACGTCCGAGGTCTTCGTCTTC ATCTCAGGTTACACCTGCATGCTGGCCTATGGCGGGGCGGTGGAGGCGCAAGGCTGGGTCACGACGGCGGTGCGAGCCTT GCGTCGCGCCTGGGAAATCTATGCGGCTTTTCTGGTGCTGCTGCTTGCCTACGCAGCGCTGGTGTGGGTGATCGGCGGCG GGAGCCGCTTCGTCGACGAGACCAACACCGGGTTCTTGTTTCGCGAGCCCGGTCCGACGCTCGTGCACGTCGCGCTGCTG CAGTTCGCCCCGGTCAACACCGACATCCTCCTGACCTTCGCGATCCTGCACATCTGCTTTCCGGTCGTGTTGTGGCTGAT GATGACGAGCGCGACAGCCACGCTCGCCGTCTCTTTTGTGCTCTACATGATGGTGCAGCTGTTCAGCTGGCAGGTGCCGG CGTGGCCGAGCGGCGAGCTGTACTTCAATCCCTACGCCTGGCAGTTCCTGTTCGTGATCGGCGCGTGGTACGCCTACGGC GGACGGCAGAGGCTGCGTCCTCTGCTGTACTCACGCACGCTTCTGATCATGGCGCTTGCCTATCTCGGCTTCAGTCTGCT CATGGCTTTGAGCTGGGAATTCAAGAGCCTCGAGAGCCTGCTTCCGCAGGCCATCGCCGCTCTGATCTATCCCATCTACA AGAGCCACCTGGCGCCGGTACGGCTGTTGCATTTTCTCGCGCTCGCTTTCGTGGTGTCGCGGCTGGCGCCACCGCAATGG CACGGCCCGATCCGTCCGCTGATGACGGCCATGATCCGGTGCGGCGAGAACTCGCTGTCGATCTACTGCATCGGCGTGCT GCTGGCGTTTATCGGCCAGGTGGTGCTGACCGACGTCGCAAGTGGCTTCGCGATGCAGCTCTTGATCAGCGTCATCGGCA TTGCCGTCATGGTGTTCGCGGCCACGCTGCTGACGTGGGAGTCTCAAGTCGATCGACGCGGGCCGAGGCTGTTCTGA
Upstream 100 bases:
>100_bases TACGCAAGATTTTGGACCGCGGCGCAGAATCTGAAACGACATGGAACCCCGATAGGTCATCGGATATCGATTGTGAAGAC GCTCCGGAAGCAGGCGAACG
Downstream 100 bases:
>100_bases TCGCTTCTCAACGCCGGCGCGCGACGGCCACGCCGAACAGGAAGGCAACGAACAGACTGGCGAGCGGAGCCTCGCGCGTA ATCGCGCTCAGAGTGGACAG
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Transmembrane Protein OpgC
Number of amino acids: Translated: 398; Mature: 398
Protein sequence:
>398_residues MEGECGINLRTRLSLMAGDPELAKTSIVGEATDAHRDLRIDACRGLALWFIFVDHVPDNSLAWLTLRNYGFSDTSEVFVF ISGYTCMLAYGGAVEAQGWVTTAVRALRRAWEIYAAFLVLLLAYAALVWVIGGGSRFVDETNTGFLFREPGPTLVHVALL QFAPVNTDILLTFAILHICFPVVLWLMMTSATATLAVSFVLYMMVQLFSWQVPAWPSGELYFNPYAWQFLFVIGAWYAYG GRQRLRPLLYSRTLLIMALAYLGFSLLMALSWEFKSLESLLPQAIAALIYPIYKSHLAPVRLLHFLALAFVVSRLAPPQW HGPIRPLMTAMIRCGENSLSIYCIGVLLAFIGQVVLTDVASGFAMQLLISVIGIAVMVFAATLLTWESQVDRRGPRLF
Sequences:
>Translated_398_residues MEGECGINLRTRLSLMAGDPELAKTSIVGEATDAHRDLRIDACRGLALWFIFVDHVPDNSLAWLTLRNYGFSDTSEVFVF ISGYTCMLAYGGAVEAQGWVTTAVRALRRAWEIYAAFLVLLLAYAALVWVIGGGSRFVDETNTGFLFREPGPTLVHVALL QFAPVNTDILLTFAILHICFPVVLWLMMTSATATLAVSFVLYMMVQLFSWQVPAWPSGELYFNPYAWQFLFVIGAWYAYG GRQRLRPLLYSRTLLIMALAYLGFSLLMALSWEFKSLESLLPQAIAALIYPIYKSHLAPVRLLHFLALAFVVSRLAPPQW HGPIRPLMTAMIRCGENSLSIYCIGVLLAFIGQVVLTDVASGFAMQLLISVIGIAVMVFAATLLTWESQVDRRGPRLF >Mature_398_residues MEGECGINLRTRLSLMAGDPELAKTSIVGEATDAHRDLRIDACRGLALWFIFVDHVPDNSLAWLTLRNYGFSDTSEVFVF ISGYTCMLAYGGAVEAQGWVTTAVRALRRAWEIYAAFLVLLLAYAALVWVIGGGSRFVDETNTGFLFREPGPTLVHVALL QFAPVNTDILLTFAILHICFPVVLWLMMTSATATLAVSFVLYMMVQLFSWQVPAWPSGELYFNPYAWQFLFVIGAWYAYG GRQRLRPLLYSRTLLIMALAYLGFSLLMALSWEFKSLESLLPQAIAALIYPIYKSHLAPVRLLHFLALAFVVSRLAPPQW HGPIRPLMTAMIRCGENSLSIYCIGVLLAFIGQVVLTDVASGFAMQLLISVIGIAVMVFAATLLTWESQVDRRGPRLF
Specific function: Unknown
COG id: COG4645
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44343; Mature: 44343
Theoretical pI: Translated: 7.49; Mature: 7.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEGECGINLRTRLSLMAGDPELAKTSIVGEATDAHRDLRIDACRGLALWFIFVDHVPDNS CCCCCCCCHHHHEEEECCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC LAWLTLRNYGFSDTSEVFVFISGYTCMLAYGGAVEAQGWVTTAVRALRRAWEIYAAFLVL EEEEEEECCCCCCCCCEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LLAYAALVWVIGGGSRFVDETNTGFLFREPGPTLVHVALLQFAPVNTDILLTFAILHICF HHHHHHHHHHHCCCCEECCCCCCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH PVVLWLMMTSATATLAVSFVLYMMVQLFSWQVPAWPSGELYFNPYAWQFLFVIGAWYAYG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHC GRQRLRPLLYSRTLLIMALAYLGFSLLMALSWEFKSLESLLPQAIAALIYPIYKSHLAPV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH RLLHFLALAFVVSRLAPPQWHGPIRPLMTAMIRCGENSLSIYCIGVLLAFIGQVVLTDVA HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH SGFAMQLLISVIGIAVMVFAATLLTWESQVDRRGPRLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MEGECGINLRTRLSLMAGDPELAKTSIVGEATDAHRDLRIDACRGLALWFIFVDHVPDNS CCCCCCCCHHHHEEEECCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC LAWLTLRNYGFSDTSEVFVFISGYTCMLAYGGAVEAQGWVTTAVRALRRAWEIYAAFLVL EEEEEEECCCCCCCCCEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LLAYAALVWVIGGGSRFVDETNTGFLFREPGPTLVHVALLQFAPVNTDILLTFAILHICF HHHHHHHHHHHCCCCEECCCCCCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH PVVLWLMMTSATATLAVSFVLYMMVQLFSWQVPAWPSGELYFNPYAWQFLFVIGAWYAYG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHC GRQRLRPLLYSRTLLIMALAYLGFSLLMALSWEFKSLESLLPQAIAALIYPIYKSHLAPV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH RLLHFLALAFVVSRLAPPQWHGPIRPLMTAMIRCGENSLSIYCIGVLLAFIGQVVLTDVA HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH SGFAMQLLISVIGIAVMVFAATLLTWESQVDRRGPRLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA