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The map label for this gene is slyA [C]

Identifier: 146342084

GI number: 146342084

Start: 5440642

End: 5441094

Strand: Direct

Name: slyA [C]

Synonym: BRADO5226

Alternate gene names: 146342084

Gene position: 5440642-5441094 (Clockwise)

Preceding gene: 146342080

Following gene: 146342086

Centisome position: 72.96

GC content: 70.42

Gene sequence:

>453_bases
ATGCCGGGACACCTGGCGCGCCGGTTCCAGCAGATCGCGGTGGCGGTGTTTCTTGCGGAGGTCGGCGCGGCCGGCTTCGA
CCTGACGCCGGTGCAATATGCGGCGCTGGCGGCCATCGCGGCCAATCCCGCGATCGACCAGATCACCCTCGCCGGCCTGA
TCGCCTATGACCGCACCACGATCACCGGCGTCATCGACCGCCTTGCGCAGAAGGGTTTGGTGGTTCGTCAGGCGAGCCTG
CGCGACCGCCGCGCGCGCGAGCTGCTGATCACCGCGGACGGACAGCGGACACTGGACGCGATCACGCCGGCCGTCGAGGC
GGCGCAGCGTCTGATGGTGCGTGGTCTGACGGGGGCCGAGGCCAAAGAGCTCACCCGCCTGCTGCGAAAAGTCATCGCCG
CCGGCAACGAGCTCAGCCGCGCGCCGCTGCGCGATGGGACGACGGGTCGGTGA

Upstream 100 bases:

>100_bases
TGACCACCCTCCCTTGCGCTTCCTTATTGATCAGTATGCTGATCATCAGTATGCTTGTCAAGCAGACCGAAGGAGACTCG
TGGTGACCGAAATGGAGGAC

Downstream 100 bases:

>100_bases
TTGTCGACAACCGCGGCTTCGGATCGTCTCGGGATCAGAGCGCGCATCGGCATCCCCGACCAGAGCATCGGCCTTCAAGC
ACCGCTGCGCTCGCTCTCCC

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator; Transcriptional Regulatory Protein; MarR-Family Transcriptional Regulator; Transcription Regulator MarR Family; Regulatory Protein MarR; MarR Family Transcription Regulator Protein; Transcriptional Regulator MarR Family Protein; MarR Family Regulatory Helix-Turn-Helix

Number of amino acids: Translated: 150; Mature: 149

Protein sequence:

>150_residues
MPGHLARRFQQIAVAVFLAEVGAAGFDLTPVQYAALAAIAANPAIDQITLAGLIAYDRTTITGVIDRLAQKGLVVRQASL
RDRRARELLITADGQRTLDAITPAVEAAQRLMVRGLTGAEAKELTRLLRKVIAAGNELSRAPLRDGTTGR

Sequences:

>Translated_150_residues
MPGHLARRFQQIAVAVFLAEVGAAGFDLTPVQYAALAAIAANPAIDQITLAGLIAYDRTTITGVIDRLAQKGLVVRQASL
RDRRARELLITADGQRTLDAITPAVEAAQRLMVRGLTGAEAKELTRLLRKVIAAGNELSRAPLRDGTTGR
>Mature_149_residues
PGHLARRFQQIAVAVFLAEVGAAGFDLTPVQYAALAAIAANPAIDQITLAGLIAYDRTTITGVIDRLAQKGLVVRQASLR
DRRARELLITADGQRTLDAITPAVEAAQRLMVRGLTGAEAKELTRLLRKVIAAGNELSRAPLRDGTTGR

Specific function: Transcription Factor That Activates Expression Of Genes Such As Molecular Chaperones (Grol, Gros, Dnak, Grpe, And Cbpa), Proteins Involved In Acid Resistance (Hdea, Hdeb, And Gada), The Starvation Lipoprotein Slp, Virulence Protein Hlye/Clya. Represses Ex

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15995; Mature: 15864

Theoretical pI: Translated: 11.25; Mature: 11.25

Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGHLARRFQQIAVAVFLAEVGAAGFDLTPVQYAALAAIAANPAIDQITLAGLIAYDRTT
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
ITGVIDRLAQKGLVVRQASLRDRRARELLITADGQRTLDAITPAVEAAQRLMVRGLTGAE
HHHHHHHHHHCCHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCC
AKELTRLLRKVIAAGNELSRAPLRDGTTGR
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PGHLARRFQQIAVAVFLAEVGAAGFDLTPVQYAALAAIAANPAIDQITLAGLIAYDRTT
CCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
ITGVIDRLAQKGLVVRQASLRDRRARELLITADGQRTLDAITPAVEAAQRLMVRGLTGAE
HHHHHHHHHHCCHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCC
AKELTRLLRKVIAAGNELSRAPLRDGTTGR
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA