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The map label for this gene is hofQ [C]

Identifier: 146342078

GI number: 146342078

Start: 5433743

End: 5435221

Strand: Direct

Name: hofQ [C]

Synonym: BRADO5219

Alternate gene names: 146342078

Gene position: 5433743-5435221 (Clockwise)

Preceding gene: 146342077

Following gene: 146342079

Centisome position: 72.87

GC content: 67.07

Gene sequence:

>1479_bases
ATGGGGACAATGATGGGTGGGCATCAAAGCGGAAAAATGGGGACGGCGCTGATGCGCGCCCTCGCCATGTCGGCGGCCAT
CGCCCTGGTGCTCAATCCGGCGCTGGCGCCGGTGAAGGCGGCCGAGGACAGGGACGCGCCGACGGTCTCGGTCGGCTCGT
CGAAGGTGCACTATCTCTCGCTCGGCATCGGCAAGTCGGTCGTGGTCGACTTCCCGCAGGACGTCAAGGACGTGCTGGTG
GCCGATCCGAAGATCGCCAACGCCGTGGTGCGCTCGGCCAAGCGCGCCTACATCATCGGAGCAGCGATAGGCCAGACCAA
CGTGGTGTTCTTCGACGGCGAGGGCCAGCAGGTCGCGGCCTATGACATCGCGATCAAGCGCGATCTCAACGGCGTGCGCC
AGGCGCTCAGCCAGAGCATTCCCGGCGTCAAGATCGACGGCGTCGGCGACGGCGTGATCCTGACCGGGTCCGTATCGAGC
CCGGTCGAGGCGCAGCAGGCGGGCGAGATCGCCGCGCGGCTGGTCGGCGGCGCCGACAAGGTGGTGAACTCGATCGTCGT
GCGCGGCCGCGACCAGGTGATGCTGAAGGTCAACGTGTCCGAAGTGCGGCGCGAGATCGTCAAGCAGCTGGGCATCGATC
TCAGCGCCAGCATGACCTACGGCACCGCGGTCGTGAACTTCAACCAGACCAATCCGTTCACGGCCTATGGCAAGTCGCTG
GCGGCCGGCAACGGCCTCTCCGCCATCGGCGGCGGCAATCTGTCGTCGGTGTCGGCGACCATGCGCGCGATGGAGACCGC
GGGCGTGGTCAAGACGCTGGCCGAGCCGAACCTGACCGCGATCTCCGGCGAGTCCGCGACCTTCATCGCCGGCGGCGAGT
TTCCGGTCCCCGGCGGCTACTCCTGCGATCCCAAGACCGGCCTGTGCAGCACCTCGGTGATGTTCAAGAAGTTCGGCATC
TCGCTCAACTTCACGCCGGTGGTGCTGAGCGAGGGCCGCATCAGCCTGCGCGTCATGACCGAAGTGTCGGAGTTGTCGAA
CGACAACGCGATCACGCTGTCCTACGCAACGAGCGCGAACTCGGCCTCGTCGGTCACCATCCCTGCGATCCGCACCCGCC
GCGCCGAGACGACGCTGGAGATTCCCTCCGGCGGCTCGATGGCGATGGCCGGCCTGATCCAGAACCAGACCAAGCAGGCG
ATCAACGGCCTGCCCGGGCTCAACCAGCTGCCGGTGCTCGGCCAGCTGTTCCGCAGCCAGGACTACGTCAACAACGAGAC
CGAGCTGATGGTGCTGGTGACGCCCTATGTGGTGCGCGCCGTCGCGCAGAAGGAGCTGTCGCGCCCGGATGACGGCTTCG
CGCCGGCGACCGATTCGGAATCGGCGCTGCTCGGCCGCATGAACCGGCTCTACGGCGTCGCCGCCAAGGTCGACGCCGTG
ACCGGACAGCCGGCCGGCTTCGGCTTCATCATCGATTGA

Upstream 100 bases:

>100_bases
CCGAGACAGAGCAGCAGCAGATGGCGCGGCGGGGCAACGCCATCGAGATCATTCGCTACGGGGTCACGAGCTCGCTGACG
GCGCAGAAGTGACGAGAAGG

Downstream 100 bases:

>100_bases
GACGGCGGGATCAGGGGCACGGGGGAACGGACATGACGGGATCATCTGCAGACAGGCGGCGCGCAGCGGCTCGCCTCGGC
GCGCTGGCGGGGCTGGCGCT

Product: putative pilus assembly protein CpaC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 492; Mature: 491

Protein sequence:

>492_residues
MGTMMGGHQSGKMGTALMRALAMSAAIALVLNPALAPVKAAEDRDAPTVSVGSSKVHYLSLGIGKSVVVDFPQDVKDVLV
ADPKIANAVVRSAKRAYIIGAAIGQTNVVFFDGEGQQVAAYDIAIKRDLNGVRQALSQSIPGVKIDGVGDGVILTGSVSS
PVEAQQAGEIAARLVGGADKVVNSIVVRGRDQVMLKVNVSEVRREIVKQLGIDLSASMTYGTAVVNFNQTNPFTAYGKSL
AAGNGLSAIGGGNLSSVSATMRAMETAGVVKTLAEPNLTAISGESATFIAGGEFPVPGGYSCDPKTGLCSTSVMFKKFGI
SLNFTPVVLSEGRISLRVMTEVSELSNDNAITLSYATSANSASSVTIPAIRTRRAETTLEIPSGGSMAMAGLIQNQTKQA
INGLPGLNQLPVLGQLFRSQDYVNNETELMVLVTPYVVRAVAQKELSRPDDGFAPATDSESALLGRMNRLYGVAAKVDAV
TGQPAGFGFIID

Sequences:

>Translated_492_residues
MGTMMGGHQSGKMGTALMRALAMSAAIALVLNPALAPVKAAEDRDAPTVSVGSSKVHYLSLGIGKSVVVDFPQDVKDVLV
ADPKIANAVVRSAKRAYIIGAAIGQTNVVFFDGEGQQVAAYDIAIKRDLNGVRQALSQSIPGVKIDGVGDGVILTGSVSS
PVEAQQAGEIAARLVGGADKVVNSIVVRGRDQVMLKVNVSEVRREIVKQLGIDLSASMTYGTAVVNFNQTNPFTAYGKSL
AAGNGLSAIGGGNLSSVSATMRAMETAGVVKTLAEPNLTAISGESATFIAGGEFPVPGGYSCDPKTGLCSTSVMFKKFGI
SLNFTPVVLSEGRISLRVMTEVSELSNDNAITLSYATSANSASSVTIPAIRTRRAETTLEIPSGGSMAMAGLIQNQTKQA
INGLPGLNQLPVLGQLFRSQDYVNNETELMVLVTPYVVRAVAQKELSRPDDGFAPATDSESALLGRMNRLYGVAAKVDAV
TGQPAGFGFIID
>Mature_491_residues
GTMMGGHQSGKMGTALMRALAMSAAIALVLNPALAPVKAAEDRDAPTVSVGSSKVHYLSLGIGKSVVVDFPQDVKDVLVA
DPKIANAVVRSAKRAYIIGAAIGQTNVVFFDGEGQQVAAYDIAIKRDLNGVRQALSQSIPGVKIDGVGDGVILTGSVSSP
VEAQQAGEIAARLVGGADKVVNSIVVRGRDQVMLKVNVSEVRREIVKQLGIDLSASMTYGTAVVNFNQTNPFTAYGKSLA
AGNGLSAIGGGNLSSVSATMRAMETAGVVKTLAEPNLTAISGESATFIAGGEFPVPGGYSCDPKTGLCSTSVMFKKFGIS
LNFTPVVLSEGRISLRVMTEVSELSNDNAITLSYATSANSASSVTIPAIRTRRAETTLEIPSGGSMAMAGLIQNQTKQAI
NGLPGLNQLPVLGQLFRSQDYVNNETELMVLVTPYVVRAVAQKELSRPDDGFAPATDSESALLGRMNRLYGVAAKVDAVT
GQPAGFGFIID

Specific function: Involved in the secretion of an unknown compound (Potential) [H]

COG id: COG4964

COG function: function code U; Flp pilus assembly protein, secretin CpaC

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 BON domain [H]

Homologues:

Organism=Escherichia coli, GI1789793, Length=192, Percent_Identity=28.125, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001775
- InterPro:   IPR004846
- InterPro:   IPR007055 [H]

Pfam domain/function: PF04972 BON; PF00263 Secretin [H]

EC number: NA

Molecular weight: Translated: 51031; Mature: 50900

Theoretical pI: Translated: 8.16; Mature: 8.16

Prosite motif: PS50914 BON

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTMMGGHQSGKMGTALMRALAMSAAIALVLNPALAPVKAAEDRDAPTVSVGSSKVHYLS
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCEEEEEE
LGIGKSVVVDFPQDVKDVLVADPKIANAVVRSAKRAYIIGAAIGQTNVVFFDGEGQQVAA
ECCCCEEEEECCHHHHHHHHCCCHHHHHHHHCCCCEEEEEEEECCCEEEEECCCCCEEEE
YDIAIKRDLNGVRQALSQSIPGVKIDGVGDGVILTGSVSSPVEAQQAGEIAARLVGGADK
EEEEEHHHHHHHHHHHHHCCCCEEECCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCHHH
VVNSIVVRGRDQVMLKVNVSEVRREIVKQLGIDLSASMTYGTAVVNFNQTNPFTAYGKSL
HHHHHHHCCCCEEEEEEEHHHHHHHHHHHHCCCEECEEEECEEEEEECCCCCCHHHCCHH
AAGNGLSAIGGGNLSSVSATMRAMETAGVVKTLAEPNLTAISGESATFIAGGEFPVPGGY
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEECCCCCCCCCC
SCDPKTGLCSTSVMFKKFGISLNFTPVVLSEGRISLRVMTEVSELSNDNAITLSYATSAN
CCCCCCCCCHHHHHHHHHCCEECCEEEEEECCCEEEEEEEEHHHCCCCCEEEEEEECCCC
SASSVTIPAIRTRRAETTLEIPSGGSMAMAGLIQNQTKQAINGLPGLNQLPVLGQLFRSQ
CCCEEEECHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCC
DYVNNETELMVLVTPYVVRAVAQKELSRPDDGFAPATDSESALLGRMNRLYGVAAKVDAV
CCCCCCCEEEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEC
TGQPAGFGFIID
CCCCCCCEEEEC
>Mature Secondary Structure 
GTMMGGHQSGKMGTALMRALAMSAAIALVLNPALAPVKAAEDRDAPTVSVGSSKVHYLS
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCEEEEEE
LGIGKSVVVDFPQDVKDVLVADPKIANAVVRSAKRAYIIGAAIGQTNVVFFDGEGQQVAA
ECCCCEEEEECCHHHHHHHHCCCHHHHHHHHCCCCEEEEEEEECCCEEEEECCCCCEEEE
YDIAIKRDLNGVRQALSQSIPGVKIDGVGDGVILTGSVSSPVEAQQAGEIAARLVGGADK
EEEEEHHHHHHHHHHHHHCCCCEEECCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCHHH
VVNSIVVRGRDQVMLKVNVSEVRREIVKQLGIDLSASMTYGTAVVNFNQTNPFTAYGKSL
HHHHHHHCCCCEEEEEEEHHHHHHHHHHHHCCCEECEEEECEEEEEECCCCCCHHHCCHH
AAGNGLSAIGGGNLSSVSATMRAMETAGVVKTLAEPNLTAISGESATFIAGGEFPVPGGY
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEECCCCCCCCCC
SCDPKTGLCSTSVMFKKFGISLNFTPVVLSEGRISLRVMTEVSELSNDNAITLSYATSAN
CCCCCCCCCHHHHHHHHHCCEECCEEEEEECCCEEEEEEEEHHHCCCCCEEEEEEECCCC
SASSVTIPAIRTRRAETTLEIPSGGSMAMAGLIQNQTKQAINGLPGLNQLPVLGQLFRSQ
CCCEEEECHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCC
DYVNNETELMVLVTPYVVRAVAQKELSRPDDGFAPATDSESALLGRMNRLYGVAAKVDAV
CCCCCCCEEEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEC
TGQPAGFGFIID
CCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]