Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146342072
Identifier: 146342072
GI number: 146342072
Start: 5426798
End: 5427901
Strand: Reverse
Name: 146342072
Synonym: BRADO5212
Alternate gene names: NA
Gene position: 5427901-5426798 (Counterclockwise)
Preceding gene: 146342074
Following gene: 146342071
Centisome position: 72.79
GC content: 63.95
Gene sequence:
>1104_bases ATGGACGACGGGGTCAGGAGTCAGCAGACCAATCAGGATCGCAACGAGGGGCCGGCAACCGATCGCCGGACTTTGCTACG CACGGCAGGTCTTGCCGGTGCGGCCGGCGCGGCGCTCGCCGGCTCCATGCACGGCAAGTTCTCGCTGGCGCCGATCAGCG AGGCGCAAGCGCAGGCCGCGCCGATGCCGAAGGGGACCGACAAGCCGTGGTGGCCGTCGAAATGGGGCAAGGACGACGAG GCCGGCGCGTCCAACCACATCACCCCGGAGAAGGTTCTCGACACCGTCAAATGGATCAAGGACGGCAAGATCTACAAGAT CGGCCGCGTCTACGAGAGCGCAATGCCGCTGTTCGGGGCACGCGCGTTCTCCTTGCGCATTCCCGGCAGCCCGACCGGCG GACCGTTCGGCGACAATCGGATGGTCTATCACGACGAGTTCCTCGCCACCGAGATCGGCCAGACCGGCACCCAGTTCGAC GGCCTCGGCCACATCGGCATCCAGCTCGGCAAGGACGGCGACAAGAGCGAGATGAAGTTCTACAACGGCTTCTCCGCGCA GGAGATCAGCGACGCCTACGGCCTCAAGAAGCTCGGCGTCGAGAAGCTGAAGCCGCTGTTCACCCGCGGCCACCTCATCG ACATGGTCGCGCTCAAGGGCGGCATGATGGATGCCGGCCAGGAGATCACCACAGCGGACATCAAGGCGGCCTTGCAGAAG CAGAACATGAGCGAGGCCGACATCAAGCCGGGCGATGCGATCTTCTTCCACACCGGCTGGGGCTCGCTGTGGATGAAGAA CAACGACCGCTTCAACAGCGGCGAACCCGGCATCGGGATGGATGTTGCAAAATGGGTGATCGAGAAGGATCTCGCGCTGA CCGGGGCCGACACCTGGGCCGTCGAGGTCGTCCCCAATCCCGACAAGTCGCTCGCCTTCGTCGTCCACGCCGAGCTGCAG ACCAAGCACGGCATCCACAACCACGAAAACCTGGTCTTCGACGAGCTGATCGCCGCGAAGAAGTACCAGTTCGTCTATTG CTTCACACCCGCCCCGATCAAGGGCGCCACAGGCAGCAACGGCTGCCCGATTGCGATTACGTGA
Upstream 100 bases:
>100_bases CTGTCTTATTTTTGTCTCTGGACATTAGACTAATGGAGGAGGAGCATGGCGAAAATCATTTTTTAAAGCCCAGCAAATGG GCGCAACAGGGGAGGCGACA
Downstream 100 bases:
>100_bases TCGGGGGCGCCGACGTTTCGGTGAAAAACGGAGGAGGGCGGATTAGCGAAGCGTAATCCGCCGTTCTTCGTCATGAAACG CGGCGGATTACGCCTTCGGC
Product: putative cyclase
Products: NA
Alternate protein names: Cyclase Family Protein; Polyketide Cyclase; Yclase SCIF3.09c; Metal-Dependent Hydrolase; LOW QUALITY PROTEIN Cyclase; Exported Cyclase; Cyclase Family; Metal-Dependent Cyclase Family Protein
Number of amino acids: Translated: 367; Mature: 367
Protein sequence:
>367_residues MDDGVRSQQTNQDRNEGPATDRRTLLRTAGLAGAAGAALAGSMHGKFSLAPISEAQAQAAPMPKGTDKPWWPSKWGKDDE AGASNHITPEKVLDTVKWIKDGKIYKIGRVYESAMPLFGARAFSLRIPGSPTGGPFGDNRMVYHDEFLATEIGQTGTQFD GLGHIGIQLGKDGDKSEMKFYNGFSAQEISDAYGLKKLGVEKLKPLFTRGHLIDMVALKGGMMDAGQEITTADIKAALQK QNMSEADIKPGDAIFFHTGWGSLWMKNNDRFNSGEPGIGMDVAKWVIEKDLALTGADTWAVEVVPNPDKSLAFVVHAELQ TKHGIHNHENLVFDELIAAKKYQFVYCFTPAPIKGATGSNGCPIAIT
Sequences:
>Translated_367_residues MDDGVRSQQTNQDRNEGPATDRRTLLRTAGLAGAAGAALAGSMHGKFSLAPISEAQAQAAPMPKGTDKPWWPSKWGKDDE AGASNHITPEKVLDTVKWIKDGKIYKIGRVYESAMPLFGARAFSLRIPGSPTGGPFGDNRMVYHDEFLATEIGQTGTQFD GLGHIGIQLGKDGDKSEMKFYNGFSAQEISDAYGLKKLGVEKLKPLFTRGHLIDMVALKGGMMDAGQEITTADIKAALQK QNMSEADIKPGDAIFFHTGWGSLWMKNNDRFNSGEPGIGMDVAKWVIEKDLALTGADTWAVEVVPNPDKSLAFVVHAELQ TKHGIHNHENLVFDELIAAKKYQFVYCFTPAPIKGATGSNGCPIAIT >Mature_367_residues MDDGVRSQQTNQDRNEGPATDRRTLLRTAGLAGAAGAALAGSMHGKFSLAPISEAQAQAAPMPKGTDKPWWPSKWGKDDE AGASNHITPEKVLDTVKWIKDGKIYKIGRVYESAMPLFGARAFSLRIPGSPTGGPFGDNRMVYHDEFLATEIGQTGTQFD GLGHIGIQLGKDGDKSEMKFYNGFSAQEISDAYGLKKLGVEKLKPLFTRGHLIDMVALKGGMMDAGQEITTADIKAALQK QNMSEADIKPGDAIFFHTGWGSLWMKNNDRFNSGEPGIGMDVAKWVIEKDLALTGADTWAVEVVPNPDKSLAFVVHAELQ TKHGIHNHENLVFDELIAAKKYQFVYCFTPAPIKGATGSNGCPIAIT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39707; Mature: 39707
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDGVRSQQTNQDRNEGPATDRRTLLRTAGLAGAAGAALAGSMHGKFSLAPISEAQAQAA CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHCCCCCEEEECCCCHHHHHHC PMPKGTDKPWWPSKWGKDDEAGASNHITPEKVLDTVKWIKDGKIYKIGRVYESAMPLFGA CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEHHHHHHHCCHHCC RAFSLRIPGSPTGGPFGDNRMVYHDEFLATEIGQTGTQFDGLGHIGIQLGKDGDKSEMKF EEEEEECCCCCCCCCCCCCEEEEEHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHE YNGFSAQEISDAYGLKKLGVEKLKPLFTRGHLIDMVALKGGMMDAGQEITTADIKAALQK ECCCCHHHHHHHHCHHHHCHHHHHHHHHCCCCEEEHHHCCCCCCCCCCHHHHHHHHHHHH QNMSEADIKPGDAIFFHTGWGSLWMKNNDRFNSGEPGIGMDVAKWVIEKDLALTGADTWA CCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCEEECCCCEE VEVVPNPDKSLAFVVHAELQTKHGIHNHENLVFDELIAAKKYQFVYCFTPAPIKGATGSN EEEECCCCCCEEEEEEEEHHHHCCCCCCCCHHHHHHHHHCCEEEEEEECCCCCCCCCCCC GCPIAIT CCCEEEC >Mature Secondary Structure MDDGVRSQQTNQDRNEGPATDRRTLLRTAGLAGAAGAALAGSMHGKFSLAPISEAQAQAA CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHCCCCCEEEECCCCHHHHHHC PMPKGTDKPWWPSKWGKDDEAGASNHITPEKVLDTVKWIKDGKIYKIGRVYESAMPLFGA CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEHHHHHHHCCHHCC RAFSLRIPGSPTGGPFGDNRMVYHDEFLATEIGQTGTQFDGLGHIGIQLGKDGDKSEMKF EEEEEECCCCCCCCCCCCCEEEEEHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHE YNGFSAQEISDAYGLKKLGVEKLKPLFTRGHLIDMVALKGGMMDAGQEITTADIKAALQK ECCCCHHHHHHHHCHHHHCHHHHHHHHHCCCCEEEHHHCCCCCCCCCCHHHHHHHHHHHH QNMSEADIKPGDAIFFHTGWGSLWMKNNDRFNSGEPGIGMDVAKWVIEKDLALTGADTWA CCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCEEECCCCEE VEVVPNPDKSLAFVVHAELQTKHGIHNHENLVFDELIAAKKYQFVYCFTPAPIKGATGSN EEEECCCCCCEEEEEEEEHHHHCCCCCCCCHHHHHHHHHCCEEEEEEECCCCCCCCCCCC GCPIAIT CCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA