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The map label for this gene is ycfQ [C]

Identifier: 146341977

GI number: 146341977

Start: 5310466

End: 5311122

Strand: Direct

Name: ycfQ [C]

Synonym: BRADO5113

Alternate gene names: 146341977

Gene position: 5310466-5311122 (Clockwise)

Preceding gene: 146341975

Following gene: 146341979

Centisome position: 71.22

GC content: 68.8

Gene sequence:

>657_bases
ATGGCGGCTTCCAAGACGGCGCGCGGCAAGGTCGGGCGCCCCCCGCTCGAACGCGCCGGCGAGGTCGAGGAGCGCATCCT
GGATGCCGCCAAGACCGTGTTCCTGGCCCATGGTTTCGAGGGCGCGAGCGTCGACGAGATCGCGCAGACGGCGCGCGCCG
GCAAGCCGACGATCTACGCGCGCTTTCCCAGCAAGGCGGCGCTGTTCGCGGCCGTGATCGCCCGCCATGCCGGCCGCAAC
ACCCAATATGAGAACCTGGTGCCGCAGGGGCGCAGCTTTCGCGCCCGGCTGATCAGCCTTGGCCAGACCTTGATCGAGCG
CGCCATGGTGGACGAGACCATCGGCCTGATGCGCACTGCGATTGCCGAGAATCCGCGCTTTCCGGAGCTGACGCTCGAGA
TCCAGGACAGCGCGCGCAAGCGCGCCACCGTCAATGTCGGCCACGCCATCGCCGAGCTGGCCCGCGCGGAGGGCCTCGCC
GGCAAGGGAGCCTTCGCCGCCGACCGGATCGAGGAGACGGCGCGAGTGTTCCTCGACCTGGTCGTCTTCGCGATGCTGAT
GCGGATCCTGCTCGGCGAAGATTTGCGGGGGCTGAAGAAGGAGGCCCAGACGCATGTCGAGAAGCGCGTCGACTTCTTCC
TCGCCGCGACGACGTGA

Upstream 100 bases:

>100_bases
GGTAGGACGCTGACGGCCTTGATTGAACTCTCGCGCCCCCTGTGCGACACAGGACAGAACGAAACGGTTTCAAAAGCGCG
ATAGGGCGATGGCGGATCGG

Downstream 100 bases:

>100_bases
CTGACTGGTCGTCGCCACGCGCACCGCCCCGCCCGCTTTGGCGCAACTCTCTCCACACGTCATTCCTTGGCGTTCGCGCG
CAAATGGCGCCGACATTTTG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Bacterial Regulatory Protein TetR Family Protein; TetR/AcrR Family Transcriptional Regulator

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MAASKTARGKVGRPPLERAGEVEERILDAAKTVFLAHGFEGASVDEIAQTARAGKPTIYARFPSKAALFAAVIARHAGRN
TQYENLVPQGRSFRARLISLGQTLIERAMVDETIGLMRTAIAENPRFPELTLEIQDSARKRATVNVGHAIAELARAEGLA
GKGAFAADRIEETARVFLDLVVFAMLMRILLGEDLRGLKKEAQTHVEKRVDFFLAATT

Sequences:

>Translated_218_residues
MAASKTARGKVGRPPLERAGEVEERILDAAKTVFLAHGFEGASVDEIAQTARAGKPTIYARFPSKAALFAAVIARHAGRN
TQYENLVPQGRSFRARLISLGQTLIERAMVDETIGLMRTAIAENPRFPELTLEIQDSARKRATVNVGHAIAELARAEGLA
GKGAFAADRIEETARVFLDLVVFAMLMRILLGEDLRGLKKEAQTHVEKRVDFFLAATT
>Mature_217_residues
AASKTARGKVGRPPLERAGEVEERILDAAKTVFLAHGFEGASVDEIAQTARAGKPTIYARFPSKAALFAAVIARHAGRNT
QYENLVPQGRSFRARLISLGQTLIERAMVDETIGLMRTAIAENPRFPELTLEIQDSARKRATVNVGHAIAELARAEGLAG
KGAFAADRIEETARVFLDLVVFAMLMRILLGEDLRGLKKEAQTHVEKRVDFFLAATT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23768; Mature: 23637

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAASKTARGKVGRPPLERAGEVEERILDAAKTVFLAHGFEGASVDEIAQTARAGKPTIYA
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEE
RFPSKAALFAAVIARHAGRNTQYENLVPQGRSFRARLISLGQTLIERAMVDETIGLMRTA
ECCCHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAENPRFPELTLEIQDSARKRATVNVGHAIAELARAEGLAGKGAFAADRIEETARVFLDL
HHCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
VVFAMLMRILLGEDLRGLKKEAQTHVEKRVDFFLAATT
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHEECC
>Mature Secondary Structure 
AASKTARGKVGRPPLERAGEVEERILDAAKTVFLAHGFEGASVDEIAQTARAGKPTIYA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEE
RFPSKAALFAAVIARHAGRNTQYENLVPQGRSFRARLISLGQTLIERAMVDETIGLMRTA
ECCCHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAENPRFPELTLEIQDSARKRATVNVGHAIAELARAEGLAGKGAFAADRIEETARVFLDL
HHCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
VVFAMLMRILLGEDLRGLKKEAQTHVEKRVDFFLAATT
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA