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The map label for this gene is uspF [H]

Identifier: 146341934

GI number: 146341934

Start: 5262295

End: 5262720

Strand: Direct

Name: uspF [H]

Synonym: BRADO5069

Alternate gene names: 146341934

Gene position: 5262295-5262720 (Clockwise)

Preceding gene: 146341933

Following gene: 146341938

Centisome position: 70.57

GC content: 64.32

Gene sequence:

>426_bases
ATGTTCAAATCGATTCTCGTTCCCATCGATCTGGCCGACACCGACCTCGCCAAGCCGGCGATCGCGACCGCAGCAACGCT
CGCCGAGACGTGGCAGGGCACGGTGCATCTGTTGAACGTGATGCCGATGACACCGGTGATGCTCGCCGAATACGTGCCGG
CCGATTTCGACGCGCAGCAGCGCGAGACCGCCGAGGAAGCACTCTCGATCGTCGCCCGCGAATCCGGCATCCCCACCGAG
CGCATCAGCTACACGGTCCGTCAGGGCGGCATCTATCACGAGATCCTCGAGGAAGCCGCCAAGGTGCAGGCCGACCTGAT
CGTGATGACCTCGCACCGCCCGGCGATGCGCACCTATTTCCTCGGCAGCAATGCCGGGCACGTGGTGCGCTACGCGAAAT
GCTCGGTGCTGGTGGTCAGGCCGTGA

Upstream 100 bases:

>100_bases
TGCTGACGTTCGTCACCCCGAAGCTGCTCAAGCACGGCTCCGATTGACAGGTCAGCCTCGCCGGGCGCGTAATATCGACG
CCGAGTGAGGAGGCCACGCG

Downstream 100 bases:

>100_bases
GGCGCGGATCGCACGCGTTACGCCGTGATCGCGTAGAGCTTGTGAGCCAATTTGAGTTCAGGGCTGAGTTTGCGACGAGG
GGCTGTCGCCGCGGGATAGC

Product: putative universal stress protein (Usp)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MFKSILVPIDLADTDLAKPAIATAATLAETWQGTVHLLNVMPMTPVMLAEYVPADFDAQQRETAEEALSIVARESGIPTE
RISYTVRQGGIYHEILEEAAKVQADLIVMTSHRPAMRTYFLGSNAGHVVRYAKCSVLVVRP

Sequences:

>Translated_141_residues
MFKSILVPIDLADTDLAKPAIATAATLAETWQGTVHLLNVMPMTPVMLAEYVPADFDAQQRETAEEALSIVARESGIPTE
RISYTVRQGGIYHEILEEAAKVQADLIVMTSHRPAMRTYFLGSNAGHVVRYAKCSVLVVRP
>Mature_141_residues
MFKSILVPIDLADTDLAKPAIATAATLAETWQGTVHLLNVMPMTPVMLAEYVPADFDAQQRETAEEALSIVARESGIPTE
RISYTVRQGGIYHEILEEAAKVQADLIVMTSHRPAMRTYFLGSNAGHVVRYAKCSVLVVRP

Specific function: Unknown

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein A family [H]

Homologues:

Organism=Escherichia coli, GI87081893, Length=148, Percent_Identity=38.5135135135135, Blast_Score=98, Evalue=2e-22,
Organism=Escherichia coli, GI1786824, Length=143, Percent_Identity=34.965034965035, Blast_Score=86, Evalue=8e-19,

Paralogues:

None

Copy number: 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR006015
- InterPro:   IPR006016 [H]

Pfam domain/function: PF00582 Usp [H]

EC number: NA

Molecular weight: Translated: 15469; Mature: 15469

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKSILVPIDLADTDLAKPAIATAATLAETWQGTVHLLNVMPMTPVMLAEYVPADFDAQQ
CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCCCHH
RETAEEALSIVARESGIPTERISYTVRQGGIYHEILEEAAKVQADLIVMTSHRPAMRTYF
HHHHHHHHHHHHHCCCCCHHHHEEEHHCCCHHHHHHHHHHHHHEEEEEEECCCCCCEEEE
LGSNAGHVVRYAKCSVLVVRP
ECCCCCCEEEEEEEEEEEECC
>Mature Secondary Structure
MFKSILVPIDLADTDLAKPAIATAATLAETWQGTVHLLNVMPMTPVMLAEYVPADFDAQQ
CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCCCHH
RETAEEALSIVARESGIPTERISYTVRQGGIYHEILEEAAKVQADLIVMTSHRPAMRTYF
HHHHHHHHHHHHHCCCCCHHHHEEEHHCCCHHHHHHHHHHHHHEEEEEEECCCCCCEEEE
LGSNAGHVVRYAKCSVLVVRP
ECCCCCCEEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]