| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is yegE [C]
Identifier: 146341909
GI number: 146341909
Start: 5233652
End: 5235763
Strand: Reverse
Name: yegE [C]
Synonym: BRADO5043
Alternate gene names: 146341909
Gene position: 5235763-5233652 (Counterclockwise)
Preceding gene: 146341910
Following gene: 146341908
Centisome position: 70.22
GC content: 68.42
Gene sequence:
>2112_bases ATGCGCGAGCTCGAAAGACCGGGAAGCCCGCTCGGCGGCGCGCTGGCAGCAGTTCAGCGCTCTTACGGCGCGCTCAGCAT CAAAGGGCGGCTGTTTCTGCTCGCCGGCATTCTGTTCCTGCCCTGCGTCGGGCTCATCGCCTATGTCATCGCTTCCATGG CGCAATCCGCTGACGGATCGATCCGGCGCGGGCTGTCCTATGCCGCCCAGACGATCTCCGGTGCCGTCGATGCCGAGTTG CGGCGCTACATCATGCTTGCCGAGGTCCTGGGGAAGTCTCCTGATCTGAGCGCGGCCGATCTTGCCGACTTCGAGGCGGA GGCGCGCCGTGTCGGTGCGGTCAGCGGCGAAGGTTGGATCATCGTCTCCGACGCCGATGGCCGCCTGCTGCTCAACACCC TGGCGCGGCCGGGCAAGCCGCTCGGCGAGCGCACGCCCGAAGGCCGCCGCTCGCAGGAACGGGCCTTTGCGTCGGGACGG CCATCGATCTCGGACATTTTCACCGGCCCGAACTCCGGCGAGTGGGTGGCGACCGTCGATGTGCCCGTCTTCAAGGACGG CAAGCCGTTCCGCTGCCTGTCGATCGCCATGCCGGCCGCGAACTATACGCGGCTGCTGGCCCAGCAGGAGCTGCCGGCCG ACTGGCTGGTCGGCATCATGGACGGCCAGGGCCGCTATGTCTCCCGGATCCCGAAGAATGCGACCAGCACCGGTCAGCTG GCGTCGGCGGGGTGGCGGGCGACCGCCAGGGAGGACGGGATTGCTGAATTTCCATCGATCGAGGGCGATCGCGTCATCAA TGCCAACGCTCATCCGCAGCTCAGCGATTGGACCGTCGGCGTCGGCATCAAGCAGGGCGCCTTCGCGCAGGCGATCTCCT CCACGGTGAAGACCGCGACGATCGCGGCGACGACGATCTGTGCGCTGGCGCTGCTGCTGGCGGCCGGTATCGGGCGCAGC ATCGCCCGGCCGCTCGAAAGCATCGCAATCAAGAGCACCAATCCCGGTGAGGCCGCGCCCTCCGATCCTCCCGAGGTGCG GGCGCTCAACGCCCGGCTCGCCGCGGCCGAGAAGGCCCAGGCCGAGAGCGCGCGCATCATCCAGGAGAATTTCGGAATGC TGGCGAAGGCCAGGGACGATGCGTCGCGGACCGCCGAGCAGCTGAAGCTCGCCGCGAAATACGGCCGGCTCGGCACCTTC ATCTGGGACGGACGCTCCGGTACCAGCCACTGGTCCGACGAGATCGAGGAGCTCTATGGCCTGAAGACCGGCACGTTCCC GGGGACCTATGACGACTGGCTCGCGCTGGTGCATCCCGACGACCAGGCCCGTGCCGACCGGGACAACAAGCAGGCGCTGA TCACCGGCGAGCTCGATTCGGAATGGAGAGTGCCATTGCCGGACGGCTCGATCCGGTGGATCGAGGCGCGTGCCCGCATG CTGCCCGGCGAAGGCGATAGCGATCGGCGGATGATCGGCGTCAACATCGACGTCACCGCCGCCAGGGAGGCCGACCGCAA GCGCGAGCTGCTGGTCCATGAGCTCGCCCATCGGGTGAAGAACAGCCTCGCGGTTGTGCAGTCGCTGGCGCACCAGTTGC TGCCCCGGCACGACGTCAAGGTCCGCGACTTCACCTCGCGTCTGCACGCACTGGCCACCGTCCACACCAGCCTCGCCGAA AACGACTGGCAGGGCGCGGATCTCGCGGCGCTGATCACAAGCCAGGTGGCGCCGTTCGCCAGCACGCCGGATCAGCTCGC GCTGAGCGGCCCGACCATCCTGGTCCCTGTCGAGCTGACGACCCAGCTCGCGCTCGTCATCCATGAGATGGCCTGCAATG CCAGCAAATACGGCGCGCTCACCACGCCGTCGGGCCGTATCGAGGTGGACTGGTCGCTCGGGCCGGATGCGCTGCACATG CGCTGGCAGGAGAGCGGCGGCCCGCCGGCCAGCGAGCCGCCGGTGGTCGGCTTCGGCAGCCGCCTCCTGACCCGCACCGT CCGGCATCTGCAGCGGACCTTCGCCGAGACCGGCCTGACCTGCCAGTTCGAGCTGCCATGGCTGGAAACGCGCAGCGAGG GCGCCGCGGCGGCCCTCAGCGAAGCGAAGTAA
Upstream 100 bases:
>100_bases CTGCCCGACACAGCCGGGCCTCATCTTGAAAACCGTCCGGAACCTTTCTGCGCCTGCGGAATTAGTTTCTGTTCCGTCTG GGAACACGCCGTGGGGGATC
Downstream 100 bases:
>100_bases ACCGGCAGTCACCGAGCTCGTTCAGAGCTGGCGAAGCGGATCGCTCCTGACACGGCCCCGACACGGCGCTCTGCCATGCT TCGACCCTCGGGGGGCGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 703; Mature: 703
Protein sequence:
>703_residues MRELERPGSPLGGALAAVQRSYGALSIKGRLFLLAGILFLPCVGLIAYVIASMAQSADGSIRRGLSYAAQTISGAVDAEL RRYIMLAEVLGKSPDLSAADLADFEAEARRVGAVSGEGWIIVSDADGRLLLNTLARPGKPLGERTPEGRRSQERAFASGR PSISDIFTGPNSGEWVATVDVPVFKDGKPFRCLSIAMPAANYTRLLAQQELPADWLVGIMDGQGRYVSRIPKNATSTGQL ASAGWRATAREDGIAEFPSIEGDRVINANAHPQLSDWTVGVGIKQGAFAQAISSTVKTATIAATTICALALLLAAGIGRS IARPLESIAIKSTNPGEAAPSDPPEVRALNARLAAAEKAQAESARIIQENFGMLAKARDDASRTAEQLKLAAKYGRLGTF IWDGRSGTSHWSDEIEELYGLKTGTFPGTYDDWLALVHPDDQARADRDNKQALITGELDSEWRVPLPDGSIRWIEARARM LPGEGDSDRRMIGVNIDVTAAREADRKRELLVHELAHRVKNSLAVVQSLAHQLLPRHDVKVRDFTSRLHALATVHTSLAE NDWQGADLAALITSQVAPFASTPDQLALSGPTILVPVELTTQLALVIHEMACNASKYGALTTPSGRIEVDWSLGPDALHM RWQESGGPPASEPPVVGFGSRLLTRTVRHLQRTFAETGLTCQFELPWLETRSEGAAAALSEAK
Sequences:
>Translated_703_residues MRELERPGSPLGGALAAVQRSYGALSIKGRLFLLAGILFLPCVGLIAYVIASMAQSADGSIRRGLSYAAQTISGAVDAEL RRYIMLAEVLGKSPDLSAADLADFEAEARRVGAVSGEGWIIVSDADGRLLLNTLARPGKPLGERTPEGRRSQERAFASGR PSISDIFTGPNSGEWVATVDVPVFKDGKPFRCLSIAMPAANYTRLLAQQELPADWLVGIMDGQGRYVSRIPKNATSTGQL ASAGWRATAREDGIAEFPSIEGDRVINANAHPQLSDWTVGVGIKQGAFAQAISSTVKTATIAATTICALALLLAAGIGRS IARPLESIAIKSTNPGEAAPSDPPEVRALNARLAAAEKAQAESARIIQENFGMLAKARDDASRTAEQLKLAAKYGRLGTF IWDGRSGTSHWSDEIEELYGLKTGTFPGTYDDWLALVHPDDQARADRDNKQALITGELDSEWRVPLPDGSIRWIEARARM LPGEGDSDRRMIGVNIDVTAAREADRKRELLVHELAHRVKNSLAVVQSLAHQLLPRHDVKVRDFTSRLHALATVHTSLAE NDWQGADLAALITSQVAPFASTPDQLALSGPTILVPVELTTQLALVIHEMACNASKYGALTTPSGRIEVDWSLGPDALHM RWQESGGPPASEPPVVGFGSRLLTRTVRHLQRTFAETGLTCQFELPWLETRSEGAAAALSEAK >Mature_703_residues MRELERPGSPLGGALAAVQRSYGALSIKGRLFLLAGILFLPCVGLIAYVIASMAQSADGSIRRGLSYAAQTISGAVDAEL RRYIMLAEVLGKSPDLSAADLADFEAEARRVGAVSGEGWIIVSDADGRLLLNTLARPGKPLGERTPEGRRSQERAFASGR PSISDIFTGPNSGEWVATVDVPVFKDGKPFRCLSIAMPAANYTRLLAQQELPADWLVGIMDGQGRYVSRIPKNATSTGQL ASAGWRATAREDGIAEFPSIEGDRVINANAHPQLSDWTVGVGIKQGAFAQAISSTVKTATIAATTICALALLLAAGIGRS IARPLESIAIKSTNPGEAAPSDPPEVRALNARLAAAEKAQAESARIIQENFGMLAKARDDASRTAEQLKLAAKYGRLGTF IWDGRSGTSHWSDEIEELYGLKTGTFPGTYDDWLALVHPDDQARADRDNKQALITGELDSEWRVPLPDGSIRWIEARARM LPGEGDSDRRMIGVNIDVTAAREADRKRELLVHELAHRVKNSLAVVQSLAHQLLPRHDVKVRDFTSRLHALATVHTSLAE NDWQGADLAALITSQVAPFASTPDQLALSGPTILVPVELTTQLALVIHEMACNASKYGALTTPSGRIEVDWSLGPDALHM RWQESGGPPASEPPVVGFGSRLLTRTVRHLQRTFAETGLTCQFELPWLETRSEGAAAALSEAK
Specific function: Photosensitive kinase that is involved in increased bacterial virulence upon exposure to light. Once ejected from an infected animal host, sunlight acts as an environmental signal that increases the virulence of the bacterium, preparing it for infection o
COG id: COG3920
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR013655 - InterPro: IPR011102 [H]
Pfam domain/function: PF07536 HWE_HK; PF00989 PAS; PF08447 PAS_3 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 75447; Mature: 75447
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: PS50112 PAS ; PS50113 PAC ; PS00142 ZINC_PROTEASE ; PS00228 TUBULIN_B_AUTOREG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRELERPGSPLGGALAAVQRSYGALSIKGRLFLLAGILFLPCVGLIAYVIASMAQSADGS CCCCCCCCCCHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH IRRGLSYAAQTISGAVDAELRRYIMLAEVLGKSPDLSAADLADFEAEARRVGAVSGEGWI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCEE IVSDADGRLLLNTLARPGKPLGERTPEGRRSQERAFASGRPSISDIFTGPNSGEWVATVD EEECCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHCCCCCCCCEEEEEE VPVFKDGKPFRCLSIAMPAANYTRLLAQQELPADWLVGIMDGQGRYVSRIPKNATSTGQL CEEECCCCCCEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCCCHHHHCCCCCCCCCCH ASAGWRATAREDGIAEFPSIEGDRVINANAHPQLSDWTVGVGIKQGAFAQAISSTVKTAT HHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHH IAATTICALALLLAAGIGRSIARPLESIAIKSTNPGEAAPSDPPEVRALNARLAAAEKAQ HHHHHHHHHHHHHHHHCCHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHH AESARIIQENFGMLAKARDDASRTAEQLKLAAKYGRLGTFIWDGRSGTSHWSDEIEELYG HHHHHHHHHHHCHHHHHHCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHC LKTGTFPGTYDDWLALVHPDDQARADRDNKQALITGELDSEWRVPLPDGSIRWIEARARM CCCCCCCCCHHCCEEEECCCHHHHCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEHHHHC LPGEGDSDRRMIGVNIDVTAAREADRKRELLVHELAHRVKNSLAVVQSLAHQLLPRHDVK CCCCCCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH VRDFTSRLHALATVHTSLAENDWQGADLAALITSQVAPFASTPDQLALSGPTILVPVELT HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCEEECCCEEEEEHHHH TQLALVIHEMACNASKYGALTTPSGRIEVDWSLGPDALHMRWQESGGPPASEPPVVGFGS HHHHHHHHHHHCCCHHCCCEECCCCCEEEEECCCCCHHEEEECCCCCCCCCCCCEECCHH RLLTRTVRHLQRTFAETGLTCQFELPWLETRSEGAAAALSEAK HHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHCCC >Mature Secondary Structure MRELERPGSPLGGALAAVQRSYGALSIKGRLFLLAGILFLPCVGLIAYVIASMAQSADGS CCCCCCCCCCHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH IRRGLSYAAQTISGAVDAELRRYIMLAEVLGKSPDLSAADLADFEAEARRVGAVSGEGWI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCEE IVSDADGRLLLNTLARPGKPLGERTPEGRRSQERAFASGRPSISDIFTGPNSGEWVATVD EEECCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHCCCCCCCCEEEEEE VPVFKDGKPFRCLSIAMPAANYTRLLAQQELPADWLVGIMDGQGRYVSRIPKNATSTGQL CEEECCCCCCEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCCCHHHHCCCCCCCCCCH ASAGWRATAREDGIAEFPSIEGDRVINANAHPQLSDWTVGVGIKQGAFAQAISSTVKTAT HHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHH IAATTICALALLLAAGIGRSIARPLESIAIKSTNPGEAAPSDPPEVRALNARLAAAEKAQ HHHHHHHHHHHHHHHHCCHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHH AESARIIQENFGMLAKARDDASRTAEQLKLAAKYGRLGTFIWDGRSGTSHWSDEIEELYG HHHHHHHHHHHCHHHHHHCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHC LKTGTFPGTYDDWLALVHPDDQARADRDNKQALITGELDSEWRVPLPDGSIRWIEARARM CCCCCCCCCHHCCEEEECCCHHHHCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEHHHHC LPGEGDSDRRMIGVNIDVTAAREADRKRELLVHELAHRVKNSLAVVQSLAHQLLPRHDVK CCCCCCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH VRDFTSRLHALATVHTSLAENDWQGADLAALITSQVAPFASTPDQLALSGPTILVPVELT HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCEEECCCEEEEEHHHH TQLALVIHEMACNASKYGALTTPSGRIEVDWSLGPDALHMRWQESGGPPASEPPVVGFGS HHHHHHHHHHHCCCHHCCCEECCCCCEEEEECCCCCHHEEEECCCCCCCCCCCCEECCHH RLLTRTVRHLQRTFAETGLTCQFELPWLETRSEGAAAALSEAK HHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA