| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is mhpD [H]
Identifier: 146341907
GI number: 146341907
Start: 5231562
End: 5232353
Strand: Reverse
Name: mhpD [H]
Synonym: BRADO5041
Alternate gene names: 146341907
Gene position: 5232353-5231562 (Counterclockwise)
Preceding gene: 146341908
Following gene: 146341902
Centisome position: 70.17
GC content: 71.21
Gene sequence:
>792_bases ATGGGAGCAGACGAGGTCCTTGCCGCCGCGCAATCGATCGTGGCCGCCCGCCGCGCGCGGACGCCGCTGGCGCCGCTGCC GGCTCACCTTCAGCCGAAGGATGAAGCGGCTGGCTATGAGATCCAGCATGAGGCTCACTGGCTGCTCGCCGAGCATGCCG GCGATTTCGCCGGCTACAAGATCGGCTGCACCAGCCAGGTGATGCAGGACTATATTGGCATTCCGCATCCTTGCGCCGGC GGCGTCTTCGCGGGCGGCGTGCACGCCTCGGGTGTCACGCTGCGCGCGGCCGACTTCGTTCGCGTCGGCGTCGAATGCGA GATCGCGGTGCGGCTGGCCAAGGACCTGCTGCCGCTGGACGCGCCGTTCACCATCGCCCATGTCGGCGACGCGATCGGCG ACTGCCATGCGGCGATCGAGATCGTCGACGACCGCTACGTGCAATGGGAGACCATGGGCGCGCCGACCCTGGTGGCCGAC GACTTCTTTGCCGCCGGCTGTGTGCTCGGTCCCGCCGTCCCGCGGGAAGCCGCCGGAGACCTCGCTGCCGTGCAGGGCCG CGCCTTCGTGAACGACGCCCTGGCCGGGCAGGGCTCCGGCGCCGACGTGCTCGGCCATCCGCTGCACGCGCTCGCCTGGC TCGCCAACCACCTCGCCTCCCGCGGCGACGGGCTCGAGGCCGGGCAGCTGGTGCTGACCGGCAGCCTGGTCAAGACGCTC TGGCTCAAGCCGGGCGACCGGGTGCGGATGGAGCTGGACGGGCTGGGCGTGGTCGAGGCGGTGTTCGCGTGA
Upstream 100 bases:
>100_bases CAGGAGATGAAGTGAGCGGCAAAAGCCGCGTCGTGACAACCTGTTAACCATAAGACCTCAGAGGCCGCTTGGAGCGGCCG ACAGCGGGAGTTGAACGATC
Downstream 100 bases:
>100_bases GGGCACGATAGAAAACAAGAATGCTGTGCCAGCCCGCAAGCCCCGCTGTCATCGCGCGGCTTGAGCCGGGGCAATCCAGG ATGACGTGAGATCCCGGTTC
Product: putative hydratase/decarboxylase 4-oxalocrotonate decarboxylase
Products: NA
Alternate protein names: 2-hydroxypentadienoic acid hydratase [H]
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MGADEVLAAAQSIVAARRARTPLAPLPAHLQPKDEAAGYEIQHEAHWLLAEHAGDFAGYKIGCTSQVMQDYIGIPHPCAG GVFAGGVHASGVTLRAADFVRVGVECEIAVRLAKDLLPLDAPFTIAHVGDAIGDCHAAIEIVDDRYVQWETMGAPTLVAD DFFAAGCVLGPAVPREAAGDLAAVQGRAFVNDALAGQGSGADVLGHPLHALAWLANHLASRGDGLEAGQLVLTGSLVKTL WLKPGDRVRMELDGLGVVEAVFA
Sequences:
>Translated_263_residues MGADEVLAAAQSIVAARRARTPLAPLPAHLQPKDEAAGYEIQHEAHWLLAEHAGDFAGYKIGCTSQVMQDYIGIPHPCAG GVFAGGVHASGVTLRAADFVRVGVECEIAVRLAKDLLPLDAPFTIAHVGDAIGDCHAAIEIVDDRYVQWETMGAPTLVAD DFFAAGCVLGPAVPREAAGDLAAVQGRAFVNDALAGQGSGADVLGHPLHALAWLANHLASRGDGLEAGQLVLTGSLVKTL WLKPGDRVRMELDGLGVVEAVFA >Mature_262_residues GADEVLAAAQSIVAARRARTPLAPLPAHLQPKDEAAGYEIQHEAHWLLAEHAGDFAGYKIGCTSQVMQDYIGIPHPCAGG VFAGGVHASGVTLRAADFVRVGVECEIAVRLAKDLLPLDAPFTIAHVGDAIGDCHAAIEIVDDRYVQWETMGAPTLVADD FFAAGCVLGPAVPREAAGDLAAVQGRAFVNDALAGQGSGADVLGHPLHALAWLANHLASRGDGLEAGQLVLTGSLVKTLW LKPGDRVRMELDGLGVVEAVFA
Specific function: Catalyzes the conversion of 2-hydroxypentadienoic acid (enolic form of 2-oxopent-4-enoate) to 4-hydroxy-2-ketopentanoic acid [H]
COG id: COG3971
COG function: function code Q; 2-keto-4-pentenoate hydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hydratase/decarboxylase family. MhpD subfamily [H]
Homologues:
Organism=Escherichia coli, GI87081722, Length=241, Percent_Identity=30.2904564315353, Blast_Score=100, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002529 - InterPro: IPR011234 [H]
Pfam domain/function: PF01557 FAA_hydrolase [H]
EC number: =4.2.1.80 [H]
Molecular weight: Translated: 27328; Mature: 27197
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGADEVLAAAQSIVAARRARTPLAPLPAHLQPKDEAAGYEIQHEAHWLLAEHAGDFAGYK CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHCCCCCCEE IGCTSQVMQDYIGIPHPCAGGVFAGGVHASGVTLRAADFVRVGVECEIAVRLAKDLLPLD ECCHHHHHHHHCCCCCCCCCCCEECCEECCCEEEEEHHEEEECCCHHHHHHHHHHHCCCC APFTIAHVGDAIGDCHAAIEIVDDRYVQWETMGAPTLVADDFFAAGCVLGPAVPREAAGD CCEEHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEHHHHHHHHHHHCCCCCCHHCCC LAAVQGRAFVNDALAGQGSGADVLGHPLHALAWLANHLASRGDGLEAGQLVLTGSLVKTL HHHHCCCHHHHHHHCCCCCCCCHHCCHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHH WLKPGDRVRMELDGLGVVEAVFA HCCCCCEEEEEECCCCHHHHHCC >Mature Secondary Structure GADEVLAAAQSIVAARRARTPLAPLPAHLQPKDEAAGYEIQHEAHWLLAEHAGDFAGYK CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHCCCCCCEE IGCTSQVMQDYIGIPHPCAGGVFAGGVHASGVTLRAADFVRVGVECEIAVRLAKDLLPLD ECCHHHHHHHHCCCCCCCCCCCEECCEECCCEEEEEHHEEEECCCHHHHHHHHHHHCCCC APFTIAHVGDAIGDCHAAIEIVDDRYVQWETMGAPTLVADDFFAAGCVLGPAVPREAAGD CCEEHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEHHHHHHHHHHHCCCCCCHHCCC LAAVQGRAFVNDALAGQGSGADVLGHPLHALAWLANHLASRGDGLEAGQLVLTGSLVKTL HHHHCCCHHHHHHHCCCCCCCCHHCCHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHH WLKPGDRVRMELDGLGVVEAVFA HCCCCCEEEEEECCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA