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The map label for this gene is flgH [H]

Identifier: 146341906

GI number: 146341906

Start: 5230250

End: 5231029

Strand: Direct

Name: flgH [H]

Synonym: BRADO5040

Alternate gene names: 146341906

Gene position: 5230250-5231029 (Clockwise)

Preceding gene: 146341905

Following gene: 146341912

Centisome position: 70.14

GC content: 65.51

Gene sequence:

>780_bases
ATGTCGACGTTCAAGTTCAATGGTCAGGGCGTTTCGGGTCTGCGGCGCGTCGCGCTGATCTCGGTCTCCTTCGCTGTGCT
GTCCGTCGCGGGCGGCTGCTCCTCAATCGACCGGCTCAGCCAGATCGGCGAGCGGCCGAAGCTGACCGAGATCGACAATC
CGACCACCCAGCCCGGCTACAAGCCGGTGCAGATGCCGATGCCGAAGCCGGAGACCGTGTCCTATGCGCCGAACTCGCTG
TGGCGCAACGGCTCGCGCGCCTTCTTCAAGGACCAGCGCGCGCACCAGATCGGCGACCTCCTCACCGTCACCGTCAGCAT
TTCCGACAAGGCCAACTTCGCCAACGAGACCCAGCGCAGCCGCACCAACAAGGAAGATTCGGGGATCACCGACTTCATCG
GCTCGAAGACGCTCGGCGCGCAGGCGCAGAAGGTGCTGCCCGGCCGCATCCTGACCGCCGACGGCACCTCGTCCTCCGAC
GGCAAGGGCACGATCCAGCGCTCGGAATCCTTGACCACTAGCGTCGCCGCGGTCGTGACCCAGGTGCTGCCAAACGGCAA
CCTGGTCGTCGAGGGCAAGCAGGAGATCCGGGTCAACTACGAGATCCGCGAGCTGATCGTGGCCGGCATCGTCCGCCCGG
AGGACATCCAGAGCGACAACACCATCGACTCGACCAAGATCGCCCAGGCCCGCATCTCCTATGGCGGCCGCGGCCAGATC
ACCGACGTGCAGCAGCCGCGCTACGGCCAGCAGGTCATGGACATCCTGCTGCCATTCTGA

Upstream 100 bases:

>100_bases
CCGTCGCCAAACCTGCCCAGACCTCCGAAGCCGACGCCGCGCCGGTCGCCGTCGCGAGCCGCCTGTCCTCCTCCGCCACC
CCGAAAGCCGAGTAAGTTTC

Downstream 100 bases:

>100_bases
GGCGGCGACACGATCGCAGGACCGGGCGGATCGCATCCCGCCCGGTCGCGAGACGACCGCCGGCTCTGATCGAGATCGGC
AGCAGACAACGAGGACGGTA

Product: flagellar basal body L-ring protein

Products: NA

Alternate protein names: Basal body L-ring protein [H]

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MSTFKFNGQGVSGLRRVALISVSFAVLSVAGGCSSIDRLSQIGERPKLTEIDNPTTQPGYKPVQMPMPKPETVSYAPNSL
WRNGSRAFFKDQRAHQIGDLLTVTVSISDKANFANETQRSRTNKEDSGITDFIGSKTLGAQAQKVLPGRILTADGTSSSD
GKGTIQRSESLTTSVAAVVTQVLPNGNLVVEGKQEIRVNYEIRELIVAGIVRPEDIQSDNTIDSTKIAQARISYGGRGQI
TDVQQPRYGQQVMDILLPF

Sequences:

>Translated_259_residues
MSTFKFNGQGVSGLRRVALISVSFAVLSVAGGCSSIDRLSQIGERPKLTEIDNPTTQPGYKPVQMPMPKPETVSYAPNSL
WRNGSRAFFKDQRAHQIGDLLTVTVSISDKANFANETQRSRTNKEDSGITDFIGSKTLGAQAQKVLPGRILTADGTSSSD
GKGTIQRSESLTTSVAAVVTQVLPNGNLVVEGKQEIRVNYEIRELIVAGIVRPEDIQSDNTIDSTKIAQARISYGGRGQI
TDVQQPRYGQQVMDILLPF
>Mature_258_residues
STFKFNGQGVSGLRRVALISVSFAVLSVAGGCSSIDRLSQIGERPKLTEIDNPTTQPGYKPVQMPMPKPETVSYAPNSLW
RNGSRAFFKDQRAHQIGDLLTVTVSISDKANFANETQRSRTNKEDSGITDFIGSKTLGAQAQKVLPGRILTADGTSSSDG
KGTIQRSESLTTSVAAVVTQVLPNGNLVVEGKQEIRVNYEIRELIVAGIVRPEDIQSDNTIDSTKIAQARISYGGRGQIT
DVQQPRYGQQVMDILLPF

Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation [H]

COG id: COG2063

COG function: function code N; Flagellar basal body L-ring protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgH family [H]

Homologues:

Organism=Escherichia coli, GI1787319, Length=202, Percent_Identity=29.7029702970297, Blast_Score=75, Evalue=5e-15,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000527 [H]

Pfam domain/function: PF02107 FlgH [H]

EC number: NA

Molecular weight: Translated: 28057; Mature: 27926

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTFKFNGQGVSGLRRVALISVSFAVLSVAGGCSSIDRLSQIGERPKLTEIDNPTTQPGY
CCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
KPVQMPMPKPETVSYAPNSLWRNGSRAFFKDQRAHQIGDLLTVTVSISDKANFANETQRS
CCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHH
RTNKEDSGITDFIGSKTLGAQAQKVLPGRILTADGTSSSDGKGTIQRSESLTTSVAAVVT
HCCCCCCCCHHHHCCCCCCCHHHHCCCCEEEEECCCCCCCCCCEEEHHHHHHHHHHHHHH
QVLPNGNLVVEGKQEIRVNYEIRELIVAGIVRPEDIQSDNTIDSTKIAQARISYGGRGQI
HHCCCCCEEEECHHHEEECHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC
TDVQQPRYGQQVMDILLPF
CCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
STFKFNGQGVSGLRRVALISVSFAVLSVAGGCSSIDRLSQIGERPKLTEIDNPTTQPGY
CEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
KPVQMPMPKPETVSYAPNSLWRNGSRAFFKDQRAHQIGDLLTVTVSISDKANFANETQRS
CCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHH
RTNKEDSGITDFIGSKTLGAQAQKVLPGRILTADGTSSSDGKGTIQRSESLTTSVAAVVT
HCCCCCCCCHHHHCCCCCCCHHHHCCCCEEEEECCCCCCCCCCEEEHHHHHHHHHHHHHH
QVLPNGNLVVEGKQEIRVNYEIRELIVAGIVRPEDIQSDNTIDSTKIAQARISYGGRGQI
HHCCCCCEEEECHHHEEECHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC
TDVQQPRYGQQVMDILLPF
CCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA