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The map label for this gene is flgF [H]

Identifier: 146341903

GI number: 146341903

Start: 5227592

End: 5228356

Strand: Direct

Name: flgF [H]

Synonym: BRADO5037

Alternate gene names: 146341903

Gene position: 5227592-5228356 (Clockwise)

Preceding gene: 146341897

Following gene: 146341904

Centisome position: 70.11

GC content: 65.1

Gene sequence:

>765_bases
GTGGAGAATGCGCTTCTCATCGGATTGTCGCGGCAGATGGTGCTGGAGCGGCAACTCGACGTCGTTGCCAACAACGTCGC
CAACGTCAACACCAACGGCTTCAAGGCCGATCAGCAGCTGTTCGAGGAGTATCTCTCCTCCGGCGCGCATGAGGACAATT
TTCCGGGCGCCGCCCGCAAGGTCTCTTACGTCCAGGACCGCGGCACCTATCGCGACTTCACGCAGGGCTCGACGGAGCGC
ACCGGCAACGCGCTCGACGTCGCGATCTCCGGCGACGGCTTCCTGACGGTGCAGACCGCCGGCGGCGAACGCTACACCCG
CGACGGCAACCTGCACATGAACAACACCGGTCAGCTGGTCACCGCGGCCGGCGACCTGGTGCTCGGCACCGGCGGCCCGA
TCGTGTTCCAGCCGACCGACCACGACATCAACATCTCGCCCGACGGCACCGTGACGGTGGTCGAGGGCGTCAACCGCACC
GACTCGATCCGCGGCAAGCTGCGCATCGTCAGCTTCGCCGATCCGCAGAAGGCCCAGAAGCAGGGCAACAATTTGTATGC
GGCCGTCGGCGGCGCCGCGCCGCAGCAGGATACGAAGTCGACCGTCCAGCAGGGCTACATCGAGAAGTCGAACGTCAGCG
CGGTCGGCGAGATGAGCAAGATGGTCGAAGTGATGCGTGCCTACACCCAGGTCGCCAACATGCTCCAGGTCCAGAGCGAC
CTGCGCAAGAGCGCGATCGAGAAACTCGCCGACGTTCCGGCCTGA

Upstream 100 bases:

>100_bases
CCGCCGGCTTGGGAGAGCTGAAAGGTTCGGAGAAGACCCGGTCGAGACCGCCTTGGGAGAGGCGCCGCGGACGGGATTCG
TTAAGAGGGGAGATCGACCG

Downstream 100 bases:

>100_bases
CCGCAGAGACTGAAGGAGACGTAAGATGCAGGCGCTTCACACCGCTGCGACCGGAATGGCGGCCCAGGAACTCAACGTTC
AGGTGATCTCCAACAACATC

Product: flagellar basal body rod protein FlgF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MENALLIGLSRQMVLERQLDVVANNVANVNTNGFKADQQLFEEYLSSGAHEDNFPGAARKVSYVQDRGTYRDFTQGSTER
TGNALDVAISGDGFLTVQTAGGERYTRDGNLHMNNTGQLVTAAGDLVLGTGGPIVFQPTDHDINISPDGTVTVVEGVNRT
DSIRGKLRIVSFADPQKAQKQGNNLYAAVGGAAPQQDTKSTVQQGYIEKSNVSAVGEMSKMVEVMRAYTQVANMLQVQSD
LRKSAIEKLADVPA

Sequences:

>Translated_254_residues
MENALLIGLSRQMVLERQLDVVANNVANVNTNGFKADQQLFEEYLSSGAHEDNFPGAARKVSYVQDRGTYRDFTQGSTER
TGNALDVAISGDGFLTVQTAGGERYTRDGNLHMNNTGQLVTAAGDLVLGTGGPIVFQPTDHDINISPDGTVTVVEGVNRT
DSIRGKLRIVSFADPQKAQKQGNNLYAAVGGAAPQQDTKSTVQQGYIEKSNVSAVGEMSKMVEVMRAYTQVANMLQVQSD
LRKSAIEKLADVPA
>Mature_254_residues
MENALLIGLSRQMVLERQLDVVANNVANVNTNGFKADQQLFEEYLSSGAHEDNFPGAARKVSYVQDRGTYRDFTQGSTER
TGNALDVAISGDGFLTVQTAGGERYTRDGNLHMNNTGQLVTAAGDLVLGTGGPIVFQPTDHDINISPDGTVTVVEGVNRT
DSIRGKLRIVSFADPQKAQKQGNNLYAAVGGAAPQQDTKSTVQQGYIEKSNVSAVGEMSKMVEVMRAYTQVANMLQVQSD
LRKSAIEKLADVPA

Specific function: Unknown

COG id: COG4786

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787318, Length=226, Percent_Identity=34.070796460177, Blast_Score=108, Evalue=3e-25,
Organism=Escherichia coli, GI1787317, Length=237, Percent_Identity=31.6455696202532, Blast_Score=88, Evalue=5e-19,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR020013
- InterPro:   IPR012836 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 27284; Mature: 27284

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENALLIGLSRQMVLERQLDVVANNVANVNTNGFKADQQLFEEYLSSGAHEDNFPGAARK
CCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHH
VSYVQDRGTYRDFTQGSTERTGNALDVAISGDGFLTVQTAGGERYTRDGNLHMNNTGQLV
HHHHHHCCCCCHHCCCCCCCCCCEEEEEECCCCEEEEEECCCCEEECCCCEEECCCCCEE
TAAGDLVLGTGGPIVFQPTDHDINISPDGTVTVVEGVNRTDSIRGKLRIVSFADPQKAQK
EECCCEEEECCCCEEECCCCCCEEECCCCCEEEEECCCCCCCCCCEEEEEEECCCHHHHH
QGNNLYAAVGGAAPQQDTKSTVQQGYIEKSNVSAVGEMSKMVEVMRAYTQVANMLQVQSD
CCCEEEEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRKSAIEKLADVPA
HHHHHHHHHHCCCC
>Mature Secondary Structure
MENALLIGLSRQMVLERQLDVVANNVANVNTNGFKADQQLFEEYLSSGAHEDNFPGAARK
CCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHH
VSYVQDRGTYRDFTQGSTERTGNALDVAISGDGFLTVQTAGGERYTRDGNLHMNNTGQLV
HHHHHHCCCCCHHCCCCCCCCCCEEEEEECCCCEEEEEECCCCEEECCCCEEECCCCCEE
TAAGDLVLGTGGPIVFQPTDHDINISPDGTVTVVEGVNRTDSIRGKLRIVSFADPQKAQK
EECCCEEEECCCCEEECCCCCCEEECCCCCEEEEECCCCCCCCCCEEEEEEECCCHHHHH
QGNNLYAAVGGAAPQQDTKSTVQQGYIEKSNVSAVGEMSKMVEVMRAYTQVANMLQVQSD
CCCEEEEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRKSAIEKLADVPA
HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1474584; 11259647 [H]