| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146341899
Identifier: 146341899
GI number: 146341899
Start: 5224235
End: 5225005
Strand: Reverse
Name: 146341899
Synonym: BRADO5033
Alternate gene names: NA
Gene position: 5225005-5224235 (Counterclockwise)
Preceding gene: 146341900
Following gene: 146341898
Centisome position: 70.07
GC content: 65.37
Gene sequence:
>771_bases ATGAATGCGTTCCGTAACATCCGCGTCATTCCCGTCGTCCTGATCGCGGTGGCGTGCCTCGCGGTCCTGAAGGTGGCCGG CCTCGTGATCGACGGCGGCTACGTGTTCGACTATGACCCGCAAGCCCCCAAGCGGTCCTGGGCCCAGGAGAACCTGGGTT ATCCGGGCCGCGAGGACAATGACATCGTCACCGGGTCGACCCATGGCGAGCCGAAGGAGAAGAAGGAAGAGGCGCCGAAG CCTGCCGCGCCCGAGACCAAGCCCGACGGCATCGTGATCAAGCCGGAGGAGAACCAGCAGCAGGTGTCGCCGGCGGAGAA GGCCATTCTCGAGCGGCTGCAGTCGCGCCGCCAGGAGCTCGAAGCGCGCCAGCGCGAGATCGACATTCGCGAGAGCCTTC TGAAGGCCGCCGAGCAGCGCATCCAGTCGAAGACCGAGGAGATGAAGGCGATCGAGAGCCGGATCTCGGGCGCGCAGGCT GCGAAGACCGAGGCCGACAACGCCCGCTTCAAGAGCATCGTCACGATGTACGAGGGTATGAAGCCGAAGGATGCCGCCAA GGTCTTCGACCGGCTCGAAATGTCCGTGCTGATCGAGATCGCCTCGCAGATCGCGCCGCGCAAGATGTCGGACATTCTCG GCCTGATGTCGCCGGAGGCGGCCGAGCGGCTCACCGTCGAGCTCGCGCGCCGGGCCGGCGCCGAAAAGCCCGAGGCGAGC GCCGAGCTGCCGAAGATCGAAGGCAAGATCGTGCCTGTGAAAAGCAATTGA
Upstream 100 bases:
>100_bases CGGCGATCACGACCGAGCCGGTGCGCGTCTCCGGCGCCAAGGCGGTCGCCGCGGCCGCGCAGGCCTTCTCTGAACGTCGA AGGACCGGTGGCCTTGCCGC
Downstream 100 bases:
>100_bases GCCGCATGTTTAATGCCCCCTTAAACGCCGGCTCCTAGACTTCCGGCGTGGCGGGGCAGGCGTATCCGTCAAGTCAGCGG ATATCGAACTGGAAGCTTGT
Product: putative signal peptide
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MNAFRNIRVIPVVLIAVACLAVLKVAGLVIDGGYVFDYDPQAPKRSWAQENLGYPGREDNDIVTGSTHGEPKEKKEEAPK PAAPETKPDGIVIKPEENQQQVSPAEKAILERLQSRRQELEARQREIDIRESLLKAAEQRIQSKTEEMKAIESRISGAQA AKTEADNARFKSIVTMYEGMKPKDAAKVFDRLEMSVLIEIASQIAPRKMSDILGLMSPEAAERLTVELARRAGAEKPEAS AELPKIEGKIVPVKSN
Sequences:
>Translated_256_residues MNAFRNIRVIPVVLIAVACLAVLKVAGLVIDGGYVFDYDPQAPKRSWAQENLGYPGREDNDIVTGSTHGEPKEKKEEAPK PAAPETKPDGIVIKPEENQQQVSPAEKAILERLQSRRQELEARQREIDIRESLLKAAEQRIQSKTEEMKAIESRISGAQA AKTEADNARFKSIVTMYEGMKPKDAAKVFDRLEMSVLIEIASQIAPRKMSDILGLMSPEAAERLTVELARRAGAEKPEAS AELPKIEGKIVPVKSN >Mature_256_residues MNAFRNIRVIPVVLIAVACLAVLKVAGLVIDGGYVFDYDPQAPKRSWAQENLGYPGREDNDIVTGSTHGEPKEKKEEAPK PAAPETKPDGIVIKPEENQQQVSPAEKAILERLQSRRQELEARQREIDIRESLLKAAEQRIQSKTEEMKAIESRISGAQA AKTEADNARFKSIVTMYEGMKPKDAAKVFDRLEMSVLIEIASQIAPRKMSDILGLMSPEAAERLTVELARRAGAEKPEAS AELPKIEGKIVPVKSN
Specific function: Unknown
COG id: COG3334
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28265; Mature: 28265
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAFRNIRVIPVVLIAVACLAVLKVAGLVIDGGYVFDYDPQAPKRSWAQENLGYPGREDN CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHCCCCCCCCC DIVTGSTHGEPKEKKEEAPKPAAPETKPDGIVIKPEENQQQVSPAEKAILERLQSRRQEL CEEECCCCCCCHHHHHCCCCCCCCCCCCCCEEECCCCCHHHCCHHHHHHHHHHHHHHHHH EARQREIDIRESLLKAAEQRIQSKTEEMKAIESRISGAQAAKTEADNARFKSIVTMYEGM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC KPKDAAKVFDRLEMSVLIEIASQIAPRKMSDILGLMSPEAAERLTVELARRAGAEKPEAS CCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCC AELPKIEGKIVPVKSN CCCCCCCCEEEEECCC >Mature Secondary Structure MNAFRNIRVIPVVLIAVACLAVLKVAGLVIDGGYVFDYDPQAPKRSWAQENLGYPGREDN CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHCCCCCCCCC DIVTGSTHGEPKEKKEEAPKPAAPETKPDGIVIKPEENQQQVSPAEKAILERLQSRRQEL CEEECCCCCCCHHHHHCCCCCCCCCCCCCCEEECCCCCHHHCCHHHHHHHHHHHHHHHHH EARQREIDIRESLLKAAEQRIQSKTEEMKAIESRISGAQAAKTEADNARFKSIVTMYEGM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC KPKDAAKVFDRLEMSVLIEIASQIAPRKMSDILGLMSPEAAERLTVELARRAGAEKPEAS CCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCC AELPKIEGKIVPVKSN CCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA