Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

Click here to switch to the map view.

The map label for this gene is 146341867

Identifier: 146341867

GI number: 146341867

Start: 5193719

End: 5194381

Strand: Reverse

Name: 146341867

Synonym: BRADO4999

Alternate gene names: NA

Gene position: 5194381-5193719 (Counterclockwise)

Preceding gene: 146341868

Following gene: 146341863

Centisome position: 69.66

GC content: 65.61

Gene sequence:

>663_bases
ATGAGCCTGAAGCCGCTGACCATCGACGTCGTGTCCGACGTCGTCTGTCCCTGGTGCTACATCGGCAAGCATCGCATCGA
GGAGGCTCTGAAGCTCGTTCCCGACGTGCCGGTCGAGCTGAACTATCGGCCGTTCTTCCTCAATCCCTGGGTGCCGCGCG
AGGGCATCAGCCGCGAGCAATATCTGACCACCAAGTTCGGGTCGGTCGAGGCCTACAAGGGCATCGCCGGCCGCGTCGTC
GCCGCCGCCGAGCAGGAGGGGCTGAGCTATCGGCCCGACAAGGTCGCGCGCCAGCCCAACACGACCGATTGCCACCGTCT
GATCCACTGGGCCGGCCAGATCGGCAAGGCGCCTGAGATGAAGCAGCGACTGATGGAGCTTTACTTCCGCGACGGCGGCG
ATCTCACCGACGTGGAGGTGCTGGTGCAGGCGGCCGCGGACTGCGGGCTCGATGCGGCCGTTGTTCGCAAGATGTTGGCG
ACCGAGGATGATGTGGCTCTGGTGTCGGGACAAGCGCAGGAGGCCGCGGAGAAAGGCATCTCCGGCGTGCCGACCTATGT
GTTCGCGCAGAAGTACGCCGTCTCCGGCGCGCAGGATCCGCAGATGCTCGCGCGCGCAATCCGTCAGGTGTCCGCGGAGA
TCAACGCTGAGGCTGCGGAGTAG

Upstream 100 bases:

>100_bases
CAGGCTGAAGGAGATGGTTACCTCGCTGTGACTCTGGCTTGTGCCGGCGTGGCATAGGCTTATCTTGGGCGGAACGCCAA
GCGAACCCGGAGCGACGCGC

Downstream 100 bases:

>100_bases
CCATCCGGCGCTTCCGCCAGCCGCGGATCGTGTGAACCGAGCGCCGTGCCAGGGCCTGTGCCTCGCGTCGGGCGATCAGT
GCGGCGTGGACGATCTCGAC

Product: putative DSBA oxidoreductase

Products: NA

Alternate protein names: Dsba Oxidoreductase; FrnE Protein; Dithiol-Disulfide Isomerase; Protein Dithiol-Disulfide Isomerase; DSBA-Like Thioredoxin Family Protein; Protein-Disulfide Isomerase; Thioredoxin Domain Protein DsbA Family; Thiol Oxidoreductase FrnE; Polyketide Biosynthesis Associated Protein; DsbA Oxidoreductase; Polyketide Synthase; DSBA-Like Thioredoxin Domain-Containing Protein; Oxidoreductase; Thioredoxin Domain-Containing Protein; 2-Hydroxychromene-2-Carboxylate Isomerase Family Protein; Polyketide Biosynthesis Dithiol-Disulfide Isomerase; DSBA-Like Thioredoxin Domain; Dsb Family Thioredoxin Protein; Protein Disulfide Isomerase; Dsba Oxidoreductase Family Protein; 2-Hydroxychromene-2-Carboxylateisomerase Family Protein; Dithiol-Disulfide Isomerase Protein; DSBA Family Oxidoreductase; Isomerase; Disulfide Isomerase; Protein Disulfide-Isomerase; Protein-Disulfide Isomerase DsbC/DsbG; Thiol Oxidoreductase; ThiolDisulfide Interchange Protein DsbA; Disulfide Oxidoreductase; DsbA Family Oxidoreductase; Thioredoxin DSBA Oxidoreductase Family; Peptidoglycan Hydrolase

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MSLKPLTIDVVSDVVCPWCYIGKHRIEEALKLVPDVPVELNYRPFFLNPWVPREGISREQYLTTKFGSVEAYKGIAGRVV
AAAEQEGLSYRPDKVARQPNTTDCHRLIHWAGQIGKAPEMKQRLMELYFRDGGDLTDVEVLVQAAADCGLDAAVVRKMLA
TEDDVALVSGQAQEAAEKGISGVPTYVFAQKYAVSGAQDPQMLARAIRQVSAEINAEAAE

Sequences:

>Translated_220_residues
MSLKPLTIDVVSDVVCPWCYIGKHRIEEALKLVPDVPVELNYRPFFLNPWVPREGISREQYLTTKFGSVEAYKGIAGRVV
AAAEQEGLSYRPDKVARQPNTTDCHRLIHWAGQIGKAPEMKQRLMELYFRDGGDLTDVEVLVQAAADCGLDAAVVRKMLA
TEDDVALVSGQAQEAAEKGISGVPTYVFAQKYAVSGAQDPQMLARAIRQVSAEINAEAAE
>Mature_219_residues
SLKPLTIDVVSDVVCPWCYIGKHRIEEALKLVPDVPVELNYRPFFLNPWVPREGISREQYLTTKFGSVEAYKGIAGRVVA
AAEQEGLSYRPDKVARQPNTTDCHRLIHWAGQIGKAPEMKQRLMELYFRDGGDLTDVEVLVQAAADCGLDAAVVRKMLAT
EDDVALVSGQAQEAAEKGISGVPTYVFAQKYAVSGAQDPQMLARAIRQVSAEINAEAAE

Specific function: Unknown

COG id: COG2761

COG function: function code Q; Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24163; Mature: 24032

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLKPLTIDVVSDVVCPWCYIGKHRIEEALKLVPDVPVELNYRPFFLNPWVPREGISREQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCEEEECCCCCCCCCCHHH
YLTTKFGSVEAYKGIAGRVVAAAEQEGLSYRPDKVARQPNTTDCHRLIHWAGQIGKAPEM
HHHHCCCCHHHHHCHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHCCCCHHH
KQRLMELYFRDGGDLTDVEVLVQAAADCGLDAAVVRKMLATEDDVALVSGQAQEAAEKGI
HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHCCCHHHHHHCCC
SGVPTYVFAQKYAVSGAQDPQMLARAIRQVSAEINAEAAE
CCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SLKPLTIDVVSDVVCPWCYIGKHRIEEALKLVPDVPVELNYRPFFLNPWVPREGISREQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCEEEECCCCCCCCCCHHH
YLTTKFGSVEAYKGIAGRVVAAAEQEGLSYRPDKVARQPNTTDCHRLIHWAGQIGKAPEM
HHHHCCCCHHHHHCHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHCCCCHHH
KQRLMELYFRDGGDLTDVEVLVQAAADCGLDAAVVRKMLATEDDVALVSGQAQEAAEKGI
HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHCCCHHHHHHCCC
SGVPTYVFAQKYAVSGAQDPQMLARAIRQVSAEINAEAAE
CCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA