| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146341867
Identifier: 146341867
GI number: 146341867
Start: 5193719
End: 5194381
Strand: Reverse
Name: 146341867
Synonym: BRADO4999
Alternate gene names: NA
Gene position: 5194381-5193719 (Counterclockwise)
Preceding gene: 146341868
Following gene: 146341863
Centisome position: 69.66
GC content: 65.61
Gene sequence:
>663_bases ATGAGCCTGAAGCCGCTGACCATCGACGTCGTGTCCGACGTCGTCTGTCCCTGGTGCTACATCGGCAAGCATCGCATCGA GGAGGCTCTGAAGCTCGTTCCCGACGTGCCGGTCGAGCTGAACTATCGGCCGTTCTTCCTCAATCCCTGGGTGCCGCGCG AGGGCATCAGCCGCGAGCAATATCTGACCACCAAGTTCGGGTCGGTCGAGGCCTACAAGGGCATCGCCGGCCGCGTCGTC GCCGCCGCCGAGCAGGAGGGGCTGAGCTATCGGCCCGACAAGGTCGCGCGCCAGCCCAACACGACCGATTGCCACCGTCT GATCCACTGGGCCGGCCAGATCGGCAAGGCGCCTGAGATGAAGCAGCGACTGATGGAGCTTTACTTCCGCGACGGCGGCG ATCTCACCGACGTGGAGGTGCTGGTGCAGGCGGCCGCGGACTGCGGGCTCGATGCGGCCGTTGTTCGCAAGATGTTGGCG ACCGAGGATGATGTGGCTCTGGTGTCGGGACAAGCGCAGGAGGCCGCGGAGAAAGGCATCTCCGGCGTGCCGACCTATGT GTTCGCGCAGAAGTACGCCGTCTCCGGCGCGCAGGATCCGCAGATGCTCGCGCGCGCAATCCGTCAGGTGTCCGCGGAGA TCAACGCTGAGGCTGCGGAGTAG
Upstream 100 bases:
>100_bases CAGGCTGAAGGAGATGGTTACCTCGCTGTGACTCTGGCTTGTGCCGGCGTGGCATAGGCTTATCTTGGGCGGAACGCCAA GCGAACCCGGAGCGACGCGC
Downstream 100 bases:
>100_bases CCATCCGGCGCTTCCGCCAGCCGCGGATCGTGTGAACCGAGCGCCGTGCCAGGGCCTGTGCCTCGCGTCGGGCGATCAGT GCGGCGTGGACGATCTCGAC
Product: putative DSBA oxidoreductase
Products: NA
Alternate protein names: Dsba Oxidoreductase; FrnE Protein; Dithiol-Disulfide Isomerase; Protein Dithiol-Disulfide Isomerase; DSBA-Like Thioredoxin Family Protein; Protein-Disulfide Isomerase; Thioredoxin Domain Protein DsbA Family; Thiol Oxidoreductase FrnE; Polyketide Biosynthesis Associated Protein; DsbA Oxidoreductase; Polyketide Synthase; DSBA-Like Thioredoxin Domain-Containing Protein; Oxidoreductase; Thioredoxin Domain-Containing Protein; 2-Hydroxychromene-2-Carboxylate Isomerase Family Protein; Polyketide Biosynthesis Dithiol-Disulfide Isomerase; DSBA-Like Thioredoxin Domain; Dsb Family Thioredoxin Protein; Protein Disulfide Isomerase; Dsba Oxidoreductase Family Protein; 2-Hydroxychromene-2-Carboxylateisomerase Family Protein; Dithiol-Disulfide Isomerase Protein; DSBA Family Oxidoreductase; Isomerase; Disulfide Isomerase; Protein Disulfide-Isomerase; Protein-Disulfide Isomerase DsbC/DsbG; Thiol Oxidoreductase; ThiolDisulfide Interchange Protein DsbA; Disulfide Oxidoreductase; DsbA Family Oxidoreductase; Thioredoxin DSBA Oxidoreductase Family; Peptidoglycan Hydrolase
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MSLKPLTIDVVSDVVCPWCYIGKHRIEEALKLVPDVPVELNYRPFFLNPWVPREGISREQYLTTKFGSVEAYKGIAGRVV AAAEQEGLSYRPDKVARQPNTTDCHRLIHWAGQIGKAPEMKQRLMELYFRDGGDLTDVEVLVQAAADCGLDAAVVRKMLA TEDDVALVSGQAQEAAEKGISGVPTYVFAQKYAVSGAQDPQMLARAIRQVSAEINAEAAE
Sequences:
>Translated_220_residues MSLKPLTIDVVSDVVCPWCYIGKHRIEEALKLVPDVPVELNYRPFFLNPWVPREGISREQYLTTKFGSVEAYKGIAGRVV AAAEQEGLSYRPDKVARQPNTTDCHRLIHWAGQIGKAPEMKQRLMELYFRDGGDLTDVEVLVQAAADCGLDAAVVRKMLA TEDDVALVSGQAQEAAEKGISGVPTYVFAQKYAVSGAQDPQMLARAIRQVSAEINAEAAE >Mature_219_residues SLKPLTIDVVSDVVCPWCYIGKHRIEEALKLVPDVPVELNYRPFFLNPWVPREGISREQYLTTKFGSVEAYKGIAGRVVA AAEQEGLSYRPDKVARQPNTTDCHRLIHWAGQIGKAPEMKQRLMELYFRDGGDLTDVEVLVQAAADCGLDAAVVRKMLAT EDDVALVSGQAQEAAEKGISGVPTYVFAQKYAVSGAQDPQMLARAIRQVSAEINAEAAE
Specific function: Unknown
COG id: COG2761
COG function: function code Q; Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24163; Mature: 24032
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLKPLTIDVVSDVVCPWCYIGKHRIEEALKLVPDVPVELNYRPFFLNPWVPREGISREQ CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCEEEECCCCCCCCCCHHH YLTTKFGSVEAYKGIAGRVVAAAEQEGLSYRPDKVARQPNTTDCHRLIHWAGQIGKAPEM HHHHCCCCHHHHHCHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHCCCCHHH KQRLMELYFRDGGDLTDVEVLVQAAADCGLDAAVVRKMLATEDDVALVSGQAQEAAEKGI HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHCCCHHHHHHCCC SGVPTYVFAQKYAVSGAQDPQMLARAIRQVSAEINAEAAE CCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SLKPLTIDVVSDVVCPWCYIGKHRIEEALKLVPDVPVELNYRPFFLNPWVPREGISREQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCEEEECCCCCCCCCCHHH YLTTKFGSVEAYKGIAGRVVAAAEQEGLSYRPDKVARQPNTTDCHRLIHWAGQIGKAPEM HHHHCCCCHHHHHCHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHCCCCHHH KQRLMELYFRDGGDLTDVEVLVQAAADCGLDAAVVRKMLATEDDVALVSGQAQEAAEKGI HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHCCCHHHHHHCCC SGVPTYVFAQKYAVSGAQDPQMLARAIRQVSAEINAEAAE CCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA