| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is 146341816
Identifier: 146341816
GI number: 146341816
Start: 5130915
End: 5132294
Strand: Reverse
Name: 146341816
Synonym: BRADO4941
Alternate gene names: NA
Gene position: 5132294-5130915 (Counterclockwise)
Preceding gene: 146341817
Following gene: 146341814
Centisome position: 68.83
GC content: 63.91
Gene sequence:
>1380_bases ATGCAGTTGGAGCGGACATCCCAGATGAGCGCGATCGGGCGAGCTGCGGCCTTGCATATCGCGTTCTGGCAATATGACCC CTGGTACCGCCGCGCCTGGTTCGTCTGGCCCCAGGTGACCGCGATGCTTCTCGCGGTCTGGCTGCTCGCGGGGCGAGGAG GGTCCGAGGCGTCAAGCCCGGCGGGAGATTGGGCAAAGCCGGTCGATTGTACCAACCCGTCGCTTCCCGGCTGCGCAGCA ACCCGGCATGCCAGCTTCGTCTGGGACGACGAGATCGCCAGGCCCATGATCGCCAATCAGGTCACGATCAGCGTGGACCG CTCGAACTTTCGCAACTCCGCCCTCGAAGATCAGCCGAAGCTCGTCGCGGCGCTCGGCGCCTATTATCGTTATGACTGGG CGAAGGCGATCGAGGTCCTGAAATCGGCGGCCGTGAGCGATCCGAACGTTCAATACCTGACGGCGCTCGCTCTGCTGGTC CCGAACTCGACCGATCAAACACGGAATGCGGAGACCTTGCTGCGCGAGGCCGCGGCCGGAGGAGTTCTTCAGGCGAACAG CGTGCTCGGGCGCATTCTGTTCGTCGGCGCGGGCGGTGTTCCCAAAGACGAGGCGGCGGGCCGCAAGCTGATCGATGACG CCGTCGCGGCGGGCGATCCCTATGCGATGCGGCTTGCCGCGGCGGGATACGTCAGCGGCGAATTCGGCGGGACATACGAC ACCGTCAAGGCCGTGGATCTGCTGCGCAGGGCGGCGGAGATCGGTGGCGATGCTGTCGTGCTGGCGCAACTTGCATTCTG CATCAATACCGGACGCGGCGGCCTGACCCGCGACACCGAAAAGACGATCGAGCACCTGCGGCGCGCGGCGGATGCCGGCT TCGAGAGTGCGCAGATCGCGCTCGCACGGTGGTTCAGGGACCGCTATGGCAATCGGGAAAGCACGGACCTGCCGGAAGCG ATCAAATGGTATGAGCGCTCCTATCAGCAAGGTCACTCCATCTTCGCCCTTGGAGAGCTCGCCGTCATCCGCAGATTTGC GCGCGAGGCGCCGTGGTTCGACACCAGGAGATCCGCCGAATTGCTGCAGCTTTGCGTGCCCTATAGAAATGCCTTCTGTC ATTTCTGGCTGGCGCGCGCCTACCATGATGGCGCCGGAGTCGCGCGAGACTACGTCAAGGCCTACGCTTACTATACGGTT GCAAAGGAGCTCGGATGGAAGGATGCCTTCGGCAACCTCCAGAAGCTCGACGATTTTCTCCAACCCGACGTCAAAAGCAG CGGCGCGGAGTTGGCGAAGAGCATCCTGGCCGGCCTCAAACCGATCCCCCGTCCCAACCGGCTCGAATTCGCCGAGACCG AGTCGCGCCCATCTCCGTGA
Upstream 100 bases:
>100_bases CTGAATTTCTTCATTCCGATCGGCGATGCGCTCAAATTTCTGGCGGTCGAGCTCGTTGGTCAGGATGAGATGTCGGTGAC TTGAGCGAATTGATCGAGCC
Downstream 100 bases:
>100_bases CGAGATTTCCAGTCAGGATGATGGGGAGCATATCATTCGGGGCGCGGACGCACCCTGGGCGATGAAGAAGATGCCGGCGC CGAAGCCGAACGCGGTCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 459; Mature: 459
Protein sequence:
>459_residues MQLERTSQMSAIGRAAALHIAFWQYDPWYRRAWFVWPQVTAMLLAVWLLAGRGGSEASSPAGDWAKPVDCTNPSLPGCAA TRHASFVWDDEIARPMIANQVTISVDRSNFRNSALEDQPKLVAALGAYYRYDWAKAIEVLKSAAVSDPNVQYLTALALLV PNSTDQTRNAETLLREAAAGGVLQANSVLGRILFVGAGGVPKDEAAGRKLIDDAVAAGDPYAMRLAAAGYVSGEFGGTYD TVKAVDLLRRAAEIGGDAVVLAQLAFCINTGRGGLTRDTEKTIEHLRRAADAGFESAQIALARWFRDRYGNRESTDLPEA IKWYERSYQQGHSIFALGELAVIRRFAREAPWFDTRRSAELLQLCVPYRNAFCHFWLARAYHDGAGVARDYVKAYAYYTV AKELGWKDAFGNLQKLDDFLQPDVKSSGAELAKSILAGLKPIPRPNRLEFAETESRPSP
Sequences:
>Translated_459_residues MQLERTSQMSAIGRAAALHIAFWQYDPWYRRAWFVWPQVTAMLLAVWLLAGRGGSEASSPAGDWAKPVDCTNPSLPGCAA TRHASFVWDDEIARPMIANQVTISVDRSNFRNSALEDQPKLVAALGAYYRYDWAKAIEVLKSAAVSDPNVQYLTALALLV PNSTDQTRNAETLLREAAAGGVLQANSVLGRILFVGAGGVPKDEAAGRKLIDDAVAAGDPYAMRLAAAGYVSGEFGGTYD TVKAVDLLRRAAEIGGDAVVLAQLAFCINTGRGGLTRDTEKTIEHLRRAADAGFESAQIALARWFRDRYGNRESTDLPEA IKWYERSYQQGHSIFALGELAVIRRFAREAPWFDTRRSAELLQLCVPYRNAFCHFWLARAYHDGAGVARDYVKAYAYYTV AKELGWKDAFGNLQKLDDFLQPDVKSSGAELAKSILAGLKPIPRPNRLEFAETESRPSP >Mature_459_residues MQLERTSQMSAIGRAAALHIAFWQYDPWYRRAWFVWPQVTAMLLAVWLLAGRGGSEASSPAGDWAKPVDCTNPSLPGCAA TRHASFVWDDEIARPMIANQVTISVDRSNFRNSALEDQPKLVAALGAYYRYDWAKAIEVLKSAAVSDPNVQYLTALALLV PNSTDQTRNAETLLREAAAGGVLQANSVLGRILFVGAGGVPKDEAAGRKLIDDAVAAGDPYAMRLAAAGYVSGEFGGTYD TVKAVDLLRRAAEIGGDAVVLAQLAFCINTGRGGLTRDTEKTIEHLRRAADAGFESAQIALARWFRDRYGNRESTDLPEA IKWYERSYQQGHSIFALGELAVIRRFAREAPWFDTRRSAELLQLCVPYRNAFCHFWLARAYHDGAGVARDYVKAYAYYTV AKELGWKDAFGNLQKLDDFLQPDVKSSGAELAKSILAGLKPIPRPNRLEFAETESRPSP
Specific function: Unknown
COG id: COG0790
COG function: function code R; FOG: TPR repeat, SEL1 subfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50502; Mature: 50502
Theoretical pI: Translated: 7.88; Mature: 7.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLERTSQMSAIGRAAALHIAFWQYDPWYRRAWFVWPQVTAMLLAVWLLAGRGGSEASSP CCCCHHHHHHHHHHHHHHEEEEECCCHHHHHHEEECHHHHHHHHHHHHHHCCCCCCCCCC AGDWAKPVDCTNPSLPGCAATRHASFVWDDEIARPMIANQVTISVDRSNFRNSALEDQPK CCCCCCCCCCCCCCCCCCHHHCCCCEEECHHHCCCHHCCCEEEEEECCHHHCCCCCCCHH LVAALGAYYRYDWAKAIEVLKSAAVSDPNVQYLTALALLVPNSTDQTRNAETLLREAAAG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCC GVLQANSVLGRILFVGAGGVPKDEAAGRKLIDDAVAAGDPYAMRLAAAGYVSGEFGGTYD CCEEHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHH TVKAVDLLRRAAEIGGDAVVLAQLAFCINTGRGGLTRDTEKTIEHLRRAADAGFESAQIA HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHH LARWFRDRYGNRESTDLPEAIKWYERSYQQGHSIFALGELAVIRRFAREAPWFDTRRSAE HHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCCCCHHHHH LLQLCVPYRNAFCHFWLARAYHDGAGVARDYVKAYAYYTVAKELGWKDAFGNLQKLDDFL HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHH QPDVKSSGAELAKSILAGLKPIPRPNRLEFAETESRPSP CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MQLERTSQMSAIGRAAALHIAFWQYDPWYRRAWFVWPQVTAMLLAVWLLAGRGGSEASSP CCCCHHHHHHHHHHHHHHEEEEECCCHHHHHHEEECHHHHHHHHHHHHHHCCCCCCCCCC AGDWAKPVDCTNPSLPGCAATRHASFVWDDEIARPMIANQVTISVDRSNFRNSALEDQPK CCCCCCCCCCCCCCCCCCHHHCCCCEEECHHHCCCHHCCCEEEEEECCHHHCCCCCCCHH LVAALGAYYRYDWAKAIEVLKSAAVSDPNVQYLTALALLVPNSTDQTRNAETLLREAAAG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCC GVLQANSVLGRILFVGAGGVPKDEAAGRKLIDDAVAAGDPYAMRLAAAGYVSGEFGGTYD CCEEHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHH TVKAVDLLRRAAEIGGDAVVLAQLAFCINTGRGGLTRDTEKTIEHLRRAADAGFESAQIA HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHH LARWFRDRYGNRESTDLPEAIKWYERSYQQGHSIFALGELAVIRRFAREAPWFDTRRSAE HHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCCCCHHHHH LLQLCVPYRNAFCHFWLARAYHDGAGVARDYVKAYAYYTVAKELGWKDAFGNLQKLDDFL HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHH QPDVKSSGAELAKSILAGLKPIPRPNRLEFAETESRPSP CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA