| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146341749
Identifier: 146341749
GI number: 146341749
Start: 5066793
End: 5068481
Strand: Reverse
Name: 146341749
Synonym: BRADO4865
Alternate gene names: NA
Gene position: 5068481-5066793 (Counterclockwise)
Preceding gene: 146341751
Following gene: 146341748
Centisome position: 67.97
GC content: 68.56
Gene sequence:
>1689_bases ATGCGGATCCGAATGACGGCGCTGGCCGCGATGCTGCTGACCACGTCGGCGATGACGTCGGCCATGACTTCGGCCATGAC TTCGGCGCAGGCCGAGGATTTCAAGGCGAGCTGCGCCGCGCTGGCGCAGGGCTTTTCCGGCAGCGGCCGCATCGTTACGG CGGAGTTCGTCGCGGCAGGCGGCGTGCAGCTCGCGCCTCCCGCGCCGGCCGGCGTCACAAGCCCGGCGCCGGATCATTGC CTGATCCGCGGCAAAATCAACGAGCGCACCGGCATCGACGGCAAGCCCTATGCGATCGGCTACGAGCTGCGATTGCCCGC GACGTGGAATGGCAAGTTCGTCTTCCAAGGCGGCGGCGGCGTCGATGGCGTGCTGCGGCCGGCGCTCGGCCTCTTGACCG GCGCAACGCCGCCGAACGCGCTTTCCAACGGCTATGTCGCGGCGTCGACCGATTCGGGCCACCTCGAAGAACCAGGTCCG CTCGGGCCTTACCAGTTCGGCCTCGACCCACAGGCGCGGCGCGACAAGGGCTACAGCTCGATTCCGCCGGTGGCCGAGGC CGCCAAGGCGGCGAGCGAGAAGCTCTACGGCCAAGCGCCGCGGCGCTCCTACTTTGCCGGCTGCTCGAACGGCGGCCGCC AGGCGATGGCGGTGACGCAGCGCTTTCCCGATCTGTTCGACGGCGTCATCGCCGGTGCGCCGGCCTATCGCGTGCCGCTC GCCGGCGTCGACGTGATCGTGCAGGAGCAGGCGCTGCTGGCGATCGCGCCTCCCGGACCCGACGGCAAGGCCGATGTCGG CAGTGCGCTCACCGATGAGGACCTGAAGCTGGTCGCCGACGGCGTGACCGCGGCCTGCGATGGCGCCGATGGCGCCAAGG ATGGCATGGTGCAGGACGTCATGGCCTGCCGCTTCGATCCGGCCGTGCTCGCCTGCAAGGAGGGCGAGAGCGCGCAATGC CTGTCGGCGCCGAAGCTCAAGGCCCTCAAGCTGATGTTCGACGGCAGCCGCAATGCGATGGGCGGGCTGATCTATTCCCG CTGGCCCTACGACCCCGGCCTCGCCGCGCCGGGCTGGCGCGCCTGGAAGCTCGGCACGCCCAAATCCAGCCCGCCGAACG CGCGCAACCTGACGCTGATCGCCGGCGGCGTGCCGTATGATTTCATGAGCCCGCCGGAGACGCCGACGGATCTCGTCGCC TGGGTGCGCAATTTCGACATCGACCGCGACGTGCCCAAGGTGATGAAGGGCGCCGGCGGCTTCGACGCCGGCATGGAGTA CGAGGCGGCGACATCGACCGATCTCGACACGTTCAAAGCCAAGGGCGGCAAGATGCTGTTCTATCACGGCACGGCCGATC CGATCTTCTCCGCGCTCGATACGATCGACTATGTCGACCAGCTCAAGAAGAAATACCCGGACACGGACGGCTTCGCCCGG CTGTTCCTGGTTCCCGGCATGAACCATTGCGGCGGCGGACCCGCGACGGATCAGTTCGACCTGCTGAGCGCACTGGACAA TTGGGTGGAGGGCAAGGCCGCCGCGCCGGAGACGATCCGCGCCTCGGCGCGGCGCGCGCCCGATGTGCCATGGCCGGGGC GCACGCGCGATCTCTGTGCGTTCCCCAAGGTCGTCACCTACAAGGGCAGCGGCAGCCTGGAAGATGCCGCCAATTTCGAA TGCCGTTGA
Upstream 100 bases:
>100_bases GGCCGCGCGCAGGCTTGGCTATGGTCGGATGCGAGTTAAGCGCCGCGGAGCAAATGACGGCGTGACGGGCGCTAGCCCGG ACGATGGGAGGACGAGACTG
Downstream 100 bases:
>100_bases AGAGGGCGTGCACGCTGCGCAAGCGGCGTGCACGATCGCTTGAGGGGCGGTTGACCCGGCGCGCGCAAGCCCCGATCTCT TGGCCAGCGTTGGCCTGCTC
Product: putative feruloyl esterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 562; Mature: 562
Protein sequence:
>562_residues MRIRMTALAAMLLTTSAMTSAMTSAMTSAQAEDFKASCAALAQGFSGSGRIVTAEFVAAGGVQLAPPAPAGVTSPAPDHC LIRGKINERTGIDGKPYAIGYELRLPATWNGKFVFQGGGGVDGVLRPALGLLTGATPPNALSNGYVAASTDSGHLEEPGP LGPYQFGLDPQARRDKGYSSIPPVAEAAKAASEKLYGQAPRRSYFAGCSNGGRQAMAVTQRFPDLFDGVIAGAPAYRVPL AGVDVIVQEQALLAIAPPGPDGKADVGSALTDEDLKLVADGVTAACDGADGAKDGMVQDVMACRFDPAVLACKEGESAQC LSAPKLKALKLMFDGSRNAMGGLIYSRWPYDPGLAAPGWRAWKLGTPKSSPPNARNLTLIAGGVPYDFMSPPETPTDLVA WVRNFDIDRDVPKVMKGAGGFDAGMEYEAATSTDLDTFKAKGGKMLFYHGTADPIFSALDTIDYVDQLKKKYPDTDGFAR LFLVPGMNHCGGGPATDQFDLLSALDNWVEGKAAAPETIRASARRAPDVPWPGRTRDLCAFPKVVTYKGSGSLEDAANFE CR
Sequences:
>Translated_562_residues MRIRMTALAAMLLTTSAMTSAMTSAMTSAQAEDFKASCAALAQGFSGSGRIVTAEFVAAGGVQLAPPAPAGVTSPAPDHC LIRGKINERTGIDGKPYAIGYELRLPATWNGKFVFQGGGGVDGVLRPALGLLTGATPPNALSNGYVAASTDSGHLEEPGP LGPYQFGLDPQARRDKGYSSIPPVAEAAKAASEKLYGQAPRRSYFAGCSNGGRQAMAVTQRFPDLFDGVIAGAPAYRVPL AGVDVIVQEQALLAIAPPGPDGKADVGSALTDEDLKLVADGVTAACDGADGAKDGMVQDVMACRFDPAVLACKEGESAQC LSAPKLKALKLMFDGSRNAMGGLIYSRWPYDPGLAAPGWRAWKLGTPKSSPPNARNLTLIAGGVPYDFMSPPETPTDLVA WVRNFDIDRDVPKVMKGAGGFDAGMEYEAATSTDLDTFKAKGGKMLFYHGTADPIFSALDTIDYVDQLKKKYPDTDGFAR LFLVPGMNHCGGGPATDQFDLLSALDNWVEGKAAAPETIRASARRAPDVPWPGRTRDLCAFPKVVTYKGSGSLEDAANFE CR >Mature_562_residues MRIRMTALAAMLLTTSAMTSAMTSAMTSAQAEDFKASCAALAQGFSGSGRIVTAEFVAAGGVQLAPPAPAGVTSPAPDHC LIRGKINERTGIDGKPYAIGYELRLPATWNGKFVFQGGGGVDGVLRPALGLLTGATPPNALSNGYVAASTDSGHLEEPGP LGPYQFGLDPQARRDKGYSSIPPVAEAAKAASEKLYGQAPRRSYFAGCSNGGRQAMAVTQRFPDLFDGVIAGAPAYRVPL AGVDVIVQEQALLAIAPPGPDGKADVGSALTDEDLKLVADGVTAACDGADGAKDGMVQDVMACRFDPAVLACKEGESAQC LSAPKLKALKLMFDGSRNAMGGLIYSRWPYDPGLAAPGWRAWKLGTPKSSPPNARNLTLIAGGVPYDFMSPPETPTDLVA WVRNFDIDRDVPKVMKGAGGFDAGMEYEAATSTDLDTFKAKGGKMLFYHGTADPIFSALDTIDYVDQLKKKYPDTDGFAR LFLVPGMNHCGGGPATDQFDLLSALDNWVEGKAAAPETIRASARRAPDVPWPGRTRDLCAFPKVVTYKGSGSLEDAANFE CR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tannase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011118 [H]
Pfam domain/function: PF07519 Tannase [H]
EC number: NA
Molecular weight: Translated: 58888; Mature: 58888
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIRMTALAAMLLTTSAMTSAMTSAMTSAQAEDFKASCAALAQGFSGSGRIVTAEFVAAG CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHCC GVQLAPPAPAGVTSPAPDHCLIRGKINERTGIDGKPYAIGYELRLPATWNGKFVFQGGGG CEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEECCCEECCEEEEECCCC VDGVLRPALGLLTGATPPNALSNGYVAASTDSGHLEEPGPLGPYQFGLDPQARRDKGYSS CCHHHHHHHHHHCCCCCCCHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCC IPPVAEAAKAASEKLYGQAPRRSYFAGCSNGGRQAMAVTQRFPDLFDGVIAGAPAYRVPL CCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHHCHHHHHHHHCCCCCCCCCC AGVDVIVQEQALLAIAPPGPDGKADVGSALTDEDLKLVADGVTAACDGADGAKDGMVQDV CCCEEEEECCEEEEEECCCCCCCCHHCCCCCCCCHHEEECCCCEECCCCCCCCCHHHHHH MACRFDPAVLACKEGESAQCLSAPKLKALKLMFDGSRNAMGGLIYSRWPYDPGLAAPGWR HHHCCCCCEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCE AWKLGTPKSSPPNARNLTLIAGGVPYDFMSPPETPTDLVAWVRNFDIDRDVPKVMKGAGG EEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHCCCC FDAGMEYEAATSTDLDTFKAKGGKMLFYHGTADPIFSALDTIDYVDQLKKKYPDTDGFAR CCCCCCCCCCCCCCCHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCEE LFLVPGMNHCGGGPATDQFDLLSALDNWVEGKAAAPETIRASARRAPDVPWPGRTRDLCA EEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHC FPKVVTYKGSGSLEDAANFECR CCCEEEECCCCCCCCCCCCCCC >Mature Secondary Structure MRIRMTALAAMLLTTSAMTSAMTSAMTSAQAEDFKASCAALAQGFSGSGRIVTAEFVAAG CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHCC GVQLAPPAPAGVTSPAPDHCLIRGKINERTGIDGKPYAIGYELRLPATWNGKFVFQGGGG CEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEECCCEECCEEEEECCCC VDGVLRPALGLLTGATPPNALSNGYVAASTDSGHLEEPGPLGPYQFGLDPQARRDKGYSS CCHHHHHHHHHHCCCCCCCHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCC IPPVAEAAKAASEKLYGQAPRRSYFAGCSNGGRQAMAVTQRFPDLFDGVIAGAPAYRVPL CCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHHCHHHHHHHHCCCCCCCCCC AGVDVIVQEQALLAIAPPGPDGKADVGSALTDEDLKLVADGVTAACDGADGAKDGMVQDV CCCEEEEECCEEEEEECCCCCCCCHHCCCCCCCCHHEEECCCCEECCCCCCCCCHHHHHH MACRFDPAVLACKEGESAQCLSAPKLKALKLMFDGSRNAMGGLIYSRWPYDPGLAAPGWR HHHCCCCCEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCE AWKLGTPKSSPPNARNLTLIAGGVPYDFMSPPETPTDLVAWVRNFDIDRDVPKVMKGAGG EEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHCCCC FDAGMEYEAATSTDLDTFKAKGGKMLFYHGTADPIFSALDTIDYVDQLKKKYPDTDGFAR CCCCCCCCCCCCCCCHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCEE LFLVPGMNHCGGGPATDQFDLLSALDNWVEGKAAAPETIRASARRAPDVPWPGRTRDLCA EEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHC FPKVVTYKGSGSLEDAANFECR CCCEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]