| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is livM [C]
Identifier: 146341741
GI number: 146341741
Start: 5060117
End: 5061187
Strand: Reverse
Name: livM [C]
Synonym: BRADO4856
Alternate gene names: 146341741
Gene position: 5061187-5060117 (Counterclockwise)
Preceding gene: 146341742
Following gene: 146341740
Centisome position: 67.88
GC content: 64.61
Gene sequence:
>1071_bases GTGACGGTGACCGGATTCCTTTCGCTGTTTCGCCGTCTCGAAGGACCTCAGACGCTCGGCCGCGGTCCCGCCTTCTGGGC GCTGTTCGCACTCGTGCTCGGCGGCGCGCTGGCCTATCCGCTGTTCAGCGACGGCTACACCGTCGGCAACACCGTCTACT TCTTCGTCTGGGTGTTCATCGCGCTCAGCCTCAGCCTGATCTGGGGCTATGGCGGCTCGCTGTCGTTCGGCCAGACCGCG TTCTTCGGCATCGCAGGCTATGGCTACGGCATCCTCACCATCAATTTCGGCGCATCCTACGGCTTCACCTGGATCGCGCT GCTGCTGGCGATCGGCATGGCGGCGCTGGTGGCGGCGCTGCTCGGCTATTTCATGTTCTTCGGCCGCATCGGCGGCGTGT TCCTCGGCATCGTCACGCTCGCGGTGACCCTCATGCTAGAGCGCTTCATGGCGCAGACCGCCGGCCCCGAATGGCGCATC GGGGCTGCCCGGCTGAACGGCTTCAACGGTATGAGCGCGATGCCGCCGCTGACCATTCCGTGGTTCGGCGGCCCGATCGT GCTGTTCGCCGATGTCGGCCTGTACTACGTCGTGCTCGGCATTCTCGTGCTGGTTTATCTAGGCTTGCGCATCCTGATGA ATTCGTCGTTCGGCAATGTCATCGTTGCCATCCGCGAGAATCCAGAGCGTGCCGAGATGCTCGGCTACGACATCCGGAAG TATCAGCTGATCACCTTCGTGATCGGCGCCGCGCTCGCCGGCCTCTCCGGCGTGCTCTATACGGTGTGGGGGCAGTACAT CACGCCCTCCAGCATGGGCATGACGGCAGCCTCGCTGCCGTTGATCTGGGTCGCCGTCGGCGGCCGCAGCGATCTCACGG CGACCGTGATCGGCACGCTGGTCGTGCTCTCCGGCTTCCAGGCGCTGACGATCTACGGCAGCCAATATGCGCTGGTGTTC ATGGGCGTGCTGCTGGTGCTGACCGTGCTGATCGCACCCAACGGCCTCGTGCTCGGCGTGATCAAGGGGATCACCAGGCT CCTGACCCGGCGCAAATCGGAGGCCGCGTGA
Upstream 100 bases:
>100_bases CTGTTCGGCCAGATCGGCCTCCTGATCGCGGTCATCATCGTCGTCCGGGTGCTGCCGAAGGGCATCTCCGGCTTCGTGCT GCGCGAGCGGACCTGAGGAG
Downstream 100 bases:
>100_bases TGGCGCTCTTGCAATTGCGCGACGTCAACAAGCATTTCGGCGGCCTGCACGTGACGAATTCCGTCAACCTCGTGCTGGAG CAGGGTGAGATCCACTGCCT
Product: branched chain amino acid ABC transporter permease
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: Urea ABC Transporter Permease Protein UrtC; Branched-Chain Amino Acid ABC Transporter Permease Protein; ABC Transporter Permease Protein; Branched Chain Amino Acid ABC Transporter Permease; Urea ABC Transporter Permease UrtC; Amino Acid Or Sugar ABC Transport System Permease Protein; Branched-Chain Amino Acid ABC Transporter Permease; ABC Transporter Membrane Spanning Protein; Branched-Chain Amino Acid Transport System Permease Protein; Transmembrane Component Of ABC Transporter; ABC Transporter Related Protein; ABC Transporter Membrane Protein; ABC Transporter ; ABC Transporter; ABC-Type Urea Transport System Permease Protein II; ABC-Type Transport System Permease Protein; Permease Of ABC Transporter; Amino Acid/Amide ABC Transporter Membrane HAAT Family; Branched-Chain Amino Acid ABC Transporter; Urea Or Short-Chain Amide ABC Transporter; Urea Or Short-Chain Amide ABC Transporter Permease Protein; Branched-Chain Amino Acid Abc Transporter Permease Protein; Branched-Chain Amino Acid Transport Permease; Branched Chain Amino Acid ABC Transporter Permease Protein; High-Affinity Branched-Chain Amino Acid Transport System; Urea ABC Transporter Permease Protein; ABC Transporter Permease; Branched-Chain Amino Acid Transporter; Urea ABC Transporter Permease; Urea Transport System Permease Protein; ABC Transporter Inner-Membrane Translocator; Branched-Chain Amino Acid ABC Transporter Membrane Protein; Integral Membrane Protein; Branched-Chain Amino Acids ABC Transporter Permease; Urea ABC Transporter Inner-Membrane Subunit UrtC; Branched Chain Amino Acid ABC Permease; Branched-Chain Amino Acid Transport System Permease; Permease Protein Of ABC Transporter; Urea Transport System Permease Component Protein; Permease Component Of ABC Transporter; Permease Transporter Transmembrane Protein; Urea/Short Chain-Amides ABC Transporter Permease; Amino Acid/Amide Abc Transporter Membrane Haat Family; Branched Chain Amino Acid ABC Transporter
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MTVTGFLSLFRRLEGPQTLGRGPAFWALFALVLGGALAYPLFSDGYTVGNTVYFFVWVFIALSLSLIWGYGGSLSFGQTA FFGIAGYGYGILTINFGASYGFTWIALLLAIGMAALVAALLGYFMFFGRIGGVFLGIVTLAVTLMLERFMAQTAGPEWRI GAARLNGFNGMSAMPPLTIPWFGGPIVLFADVGLYYVVLGILVLVYLGLRILMNSSFGNVIVAIRENPERAEMLGYDIRK YQLITFVIGAALAGLSGVLYTVWGQYITPSSMGMTAASLPLIWVAVGGRSDLTATVIGTLVVLSGFQALTIYGSQYALVF MGVLLVLTVLIAPNGLVLGVIKGITRLLTRRKSEAA
Sequences:
>Translated_356_residues MTVTGFLSLFRRLEGPQTLGRGPAFWALFALVLGGALAYPLFSDGYTVGNTVYFFVWVFIALSLSLIWGYGGSLSFGQTA FFGIAGYGYGILTINFGASYGFTWIALLLAIGMAALVAALLGYFMFFGRIGGVFLGIVTLAVTLMLERFMAQTAGPEWRI GAARLNGFNGMSAMPPLTIPWFGGPIVLFADVGLYYVVLGILVLVYLGLRILMNSSFGNVIVAIRENPERAEMLGYDIRK YQLITFVIGAALAGLSGVLYTVWGQYITPSSMGMTAASLPLIWVAVGGRSDLTATVIGTLVVLSGFQALTIYGSQYALVF MGVLLVLTVLIAPNGLVLGVIKGITRLLTRRKSEAA >Mature_355_residues TVTGFLSLFRRLEGPQTLGRGPAFWALFALVLGGALAYPLFSDGYTVGNTVYFFVWVFIALSLSLIWGYGGSLSFGQTAF FGIAGYGYGILTINFGASYGFTWIALLLAIGMAALVAALLGYFMFFGRIGGVFLGIVTLAVTLMLERFMAQTAGPEWRIG AARLNGFNGMSAMPPLTIPWFGGPIVLFADVGLYYVVLGILVLVYLGLRILMNSSFGNVIVAIRENPERAEMLGYDIRKY QLITFVIGAALAGLSGVLYTVWGQYITPSSMGMTAASLPLIWVAVGGRSDLTATVIGTLVVLSGFQALTIYGSQYALVFM GVLLVLTVLIAPNGLVLGVIKGITRLLTRRKSEAA
Specific function: Part Of The Binding-Protein-Dependent Transport System For Branched-Chain Amino Acids. Probably Responsible For The Translocation Of The Substrates Across The Membrane. [C]
COG id: COG4177
COG function: function code E; ABC-type branched-chain amino acid transport system, permease component
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789865, Length=343, Percent_Identity=24.198250728863, Blast_Score=66, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38075; Mature: 37944
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVTGFLSLFRRLEGPQTLGRGPAFWALFALVLGGALAYPLFSDGYTVGNTVYFFVWVFI CCHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHH ALSLSLIWGYGGSLSFGQTAFFGIAGYGYGILTINFGASYGFTWIALLLAIGMAALVAAL HHHHHHHHCCCCCCCCCCHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH LGYFMFFGRIGGVFLGIVTLAVTLMLERFMAQTAGPEWRIGAARLNGFNGMSAMPPLTIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHCCCCCCCCCCCCEEEC WFGGPIVLFADVGLYYVVLGILVLVYLGLRILMNSSFGNVIVAIRENPERAEMLGYDIRK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHCCHHHH YQLITFVIGAALAGLSGVLYTVWGQYITPSSMGMTAASLPLIWVAVGGRSDLTATVIGTL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCEEEEEECCCCCHHHHHHHHH VVLSGFQALTIYGSQYALVFMGVLLVLTVLIAPNGLVLGVIKGITRLLTRRKSEAA HHHCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TVTGFLSLFRRLEGPQTLGRGPAFWALFALVLGGALAYPLFSDGYTVGNTVYFFVWVFI CHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHH ALSLSLIWGYGGSLSFGQTAFFGIAGYGYGILTINFGASYGFTWIALLLAIGMAALVAAL HHHHHHHHCCCCCCCCCCHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH LGYFMFFGRIGGVFLGIVTLAVTLMLERFMAQTAGPEWRIGAARLNGFNGMSAMPPLTIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHCCCCCCCCCCCCEEEC WFGGPIVLFADVGLYYVVLGILVLVYLGLRILMNSSFGNVIVAIRENPERAEMLGYDIRK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHCCHHHH YQLITFVIGAALAGLSGVLYTVWGQYITPSSMGMTAASLPLIWVAVGGRSDLTATVIGTL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCEEEEEECCCCCHHHHHHHHH VVLSGFQALTIYGSQYALVFMGVLLVLTVLIAPNGLVLGVIKGITRLLTRRKSEAA HHHCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA