| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is feaR [C]
Identifier: 146341449
GI number: 146341449
Start: 4738590
End: 4739546
Strand: Direct
Name: feaR [C]
Synonym: BRADO4540
Alternate gene names: 146341449
Gene position: 4738590-4739546 (Clockwise)
Preceding gene: 146341447
Following gene: 146341450
Centisome position: 63.55
GC content: 68.44
Gene sequence:
>957_bases ATGCCGATCCTGTTCACCACCGAGGGAAGCCCGGGCCACCGCCGGCTGGCGCTGTGGCAGGACATCGTCTGCGACGTCTA TGTCGGACTCGACTGCACGTCCGATCTCGGCAGCGCGTTTCGCGGCGCGGTGACGCATACGACGCTGGGCCGCGCCGTCT GCTCCGAGGTCGTCTCCGACCGGCAGCGCGTGCGCCGAACCTCGCAGCGCATCGCGCGCGCGGATGCCGACTATGTGCTG GTCGCGCTCGGCCGCGAGGGCATCGGCGGCGTCACCCAGGACGGCCGCGACACGATGATCCGTCCCGGCGAATTCGCGAT CTATGATACGACCCGCACTTACGAGTTGCAGTTCGACACCGCCTTCCGGCAGACCGTGTTCAAGCTGCCGCGCGACATGC TGCAGCGCAGGATCGGCGCGACCGAGGCCGTCACGGCGATCACCTTCGGCGCCGACAGCCCGCTGCAGCCTCTCGCCTAC GAGTTCATCGTCAAGCTGTGCGAACGCGCCGATCACATCGGCGCCGAGCACGCCGACCGTCTGGCCGACCAGGCCGCCGA CCTGCTGGCGATGACCTTGGCCGAGCGGCTGCGAACCCAGCCGCTGCCAGCCTCGAGCCATCGGGCGGCCCTGCTCTATC GCATCAAAGCGAATGTCCGCGCGCGTCTCGCCGATTGCGATCTGTCGCTGCCGAAGGTCGCGCGCGAGCTCGGCCTGTCG CCGCGCTACATCAACGACCTGTTCTCGGACGAGCAGCTGTCTTTCCAGCGCTTCGTGCTCGCCGAGCGCCTGAAGCTGTG CCGACGCGACCTCGCCGCCCCTGCCCTGGCGTATCGCCAGATCAGCGAGATCGCCTTCAGCTGGGGCTTCAACGACCTCT CGCATTTCGGCCGCGTGTTTCGCGAGCAGTTCGGCCAGTCGCCACGCGAGTGGCGGCGCAGCAACCTGACGCGCTAG
Upstream 100 bases:
>100_bases GAACGAAAAGTCGACTGTGGCGGCGCCAGGCCGGCTTCGGCCCGAAACTTGCTGCACTGCGCCAGATTTAATCGACAGAG GTGCAAGGGGAGACGGACCG
Downstream 100 bases:
>100_bases TCTACACTACGCCAAGCCCTGCCTTTCGAGCCGGGCGGCAGCCGGATTTCCGCATGCGCCGTTTCGCCTTGAAAGCCCTG TTCTCGCTGCTCACGCTGCA
Product: AraC/XylS family transcriptional regulator
Products: NA
Alternate protein names: orf2 [H]
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MPILFTTEGSPGHRRLALWQDIVCDVYVGLDCTSDLGSAFRGAVTHTTLGRAVCSEVVSDRQRVRRTSQRIARADADYVL VALGREGIGGVTQDGRDTMIRPGEFAIYDTTRTYELQFDTAFRQTVFKLPRDMLQRRIGATEAVTAITFGADSPLQPLAY EFIVKLCERADHIGAEHADRLADQAADLLAMTLAERLRTQPLPASSHRAALLYRIKANVRARLADCDLSLPKVARELGLS PRYINDLFSDEQLSFQRFVLAERLKLCRRDLAAPALAYRQISEIAFSWGFNDLSHFGRVFREQFGQSPREWRRSNLTR
Sequences:
>Translated_318_residues MPILFTTEGSPGHRRLALWQDIVCDVYVGLDCTSDLGSAFRGAVTHTTLGRAVCSEVVSDRQRVRRTSQRIARADADYVL VALGREGIGGVTQDGRDTMIRPGEFAIYDTTRTYELQFDTAFRQTVFKLPRDMLQRRIGATEAVTAITFGADSPLQPLAY EFIVKLCERADHIGAEHADRLADQAADLLAMTLAERLRTQPLPASSHRAALLYRIKANVRARLADCDLSLPKVARELGLS PRYINDLFSDEQLSFQRFVLAERLKLCRRDLAAPALAYRQISEIAFSWGFNDLSHFGRVFREQFGQSPREWRRSNLTR >Mature_317_residues PILFTTEGSPGHRRLALWQDIVCDVYVGLDCTSDLGSAFRGAVTHTTLGRAVCSEVVSDRQRVRRTSQRIARADADYVLV ALGREGIGGVTQDGRDTMIRPGEFAIYDTTRTYELQFDTAFRQTVFKLPRDMLQRRIGATEAVTAITFGADSPLQPLAYE FIVKLCERADHIGAEHADRLADQAADLLAMTLAERLRTQPLPASSHRAALLYRIKANVRARLADCDLSLPKVARELGLSP RYINDLFSDEQLSFQRFVLAERLKLCRRDLAAPALAYRQISEIAFSWGFNDLSHFGRVFREQFGQSPREWRRSNLTR
Specific function: Positive Regulator Of Tyna/Maoa And Feab/Pada, The Genes For 2-Phenylethylamine Catabolism. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787649, Length=269, Percent_Identity=26.0223048327138, Blast_Score=85, Evalue=6e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003313 [H]
Pfam domain/function: PF02311 AraC_binding [H]
EC number: NA
Molecular weight: Translated: 35867; Mature: 35736
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: PS01124 HTH_ARAC_FAMILY_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPILFTTEGSPGHRRLALWQDIVCDVYVGLDCTSDLGSAFRGAVTHTTLGRAVCSEVVSD CCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RQRVRRTSQRIARADADYVLVALGREGIGGVTQDGRDTMIRPGEFAIYDTTRTYELQFDT HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEEEHH AFRQTVFKLPRDMLQRRIGATEAVTAITFGADSPLQPLAYEFIVKLCERADHIGAEHADR HHHHHHHHHHHHHHHHHHCCHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHH LADQAADLLAMTLAERLRTQPLPASSHRAALLYRIKANVRARLADCDLSLPKVARELGLS HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHEEEHHHHHHHHHHCCCCHHHHHHHHCCC PRYINDLFSDEQLSFQRFVLAERLKLCRRDLAAPALAYRQISEIAFSWGFNDLSHFGRVF HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH REQFGQSPREWRRSNLTR HHHHCCCHHHHHHCCCCC >Mature Secondary Structure PILFTTEGSPGHRRLALWQDIVCDVYVGLDCTSDLGSAFRGAVTHTTLGRAVCSEVVSD CEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RQRVRRTSQRIARADADYVLVALGREGIGGVTQDGRDTMIRPGEFAIYDTTRTYELQFDT HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEEEHH AFRQTVFKLPRDMLQRRIGATEAVTAITFGADSPLQPLAYEFIVKLCERADHIGAEHADR HHHHHHHHHHHHHHHHHHCCHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHH LADQAADLLAMTLAERLRTQPLPASSHRAALLYRIKANVRARLADCDLSLPKVARELGLS HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHEEEHHHHHHHHHHCCCCHHHHHHHHCCC PRYINDLFSDEQLSFQRFVLAERLKLCRRDLAAPALAYRQISEIAFSWGFNDLSHFGRVF HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH REQFGQSPREWRRSNLTR HHHHCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10651646 [H]