| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146341357
Identifier: 146341357
GI number: 146341357
Start: 4642620
End: 4643846
Strand: Direct
Name: 146341357
Synonym: BRADO4441
Alternate gene names: NA
Gene position: 4642620-4643846 (Clockwise)
Preceding gene: 146341356
Following gene: 146341361
Centisome position: 62.26
GC content: 70.17
Gene sequence:
>1227_bases ATGCCGCCGTCCTCTGCCCTGCCCGCCAAATTTCATCGTCTCGCCTGGTCCAACCTCACAGCACAATCTGCCGAGCAGAT CGCACTCGCCGCCGCGCCGATCGTCGCCGTGCTGGCGCTCGGGGTCGGCGAGGGCGAGACCGGAATCCTGCAAACCGCAC TGACTGCACCGTTCGTGCTGTTCGCCATCCCGGCCGGCCTGCTCGCCGACCGCATGCCGCGACGGCTGCTGATGGCTGCC GCCGAAGCGCTGCGCGCGCTGGCGCTGCTCGCGATCCTCATGGCCTTCGCGGCCGGTGTCCTCACTTTGCCGCTGCTCGC CACCCTTGGATTTGCGGCGGTGTGTGGCACCGTCGTGTTCAGCGTCGCCGCGCCCGCTCTGGTGCCGAGCCTGGTTTCCC CCGCGCAACTGGCCGCGGCCAATGCGCGGATCGAGCTGGCTCGCACCGTTGCCTTCGCGGCCGGGCCCGCGGTCGGCGGC ATGCTGGTCGGATGGATCGGCGTCGCGCCCGCCTTCGGCGTCGCCGCCGCGCTGTCGCTGATCGCCACCCTGTGCCTCGC CGGCATCACCGAGCCGGTCCGCCCCCCGGCGCCGCGCCGCCATCCGTTCGCCGACATCCGCGAGGGCGCCGCGTTCGTCT TGAACCATTCGCTGCTGCGGCCGGTGTTCGTGACACAGTTCATCTTCAACACGGCGCACTTCCTGCTGCTCGCGGTGTTC GTGCCCTATGCGGTGCACCGGCTCGGCCTGTCGGCGGGCGGCGTCGGCACGGTGCTGTCGATGTTCGGCGTCGGCATGGT CTGCGGCGCGCTCCTGGCAACACGCATGCTGCGACGCCTGCCGTTCGGCACCGTGATCGGGCTCGGTCCTGTCACCGGCT TTGCTGCCGCGCTGATGATGGCGCTTACCACCTTCTTCCCTTCTCCTCTTCTTGCCGCACTGAGCTTCTTCATGCTCGGC GCGGGACCCATCCTGTGGGTGATTTCGACCACCACCTTGCGCCAGTCGGTGACACCGGCGGGACTGCTCGGCCGCGTCTC GGCCATCAACATCCTGAGCTACGGTGCCCGCCCGGCGGGCTCGCTGCTCGGCGCCATCGTCGGGGGCCGCTACGGCGCCG ACGCCTGTCTCTATCTCGCCGCGGGAATTTTCGGCCTGCAGGCCCTGATCATCCTCACCTCGCCCGCGGTTGCGATCGCG CGCCAGCCGGAGCCGCAGCCGGCCTAG
Upstream 100 bases:
>100_bases AGCGGGCTGAGCGGACGGCGACGGCTCTGATCGGAAAGCGGGTGGGCGCGAGGGCCCGCCGCGCTGATGATGGCCGCATC ATCACCTCAGGTCCCCCGAC
Downstream 100 bases:
>100_bases CGATAGACCAGGATCGGCACGGTCGAATGCGTCAGCACCTTCAGGGTCTCGCTGCCGAGAAGAGCGGAGACGCCGCGCAG CCCGTGCGAGGCCATCAGCA
Product: MFS family multidrug resistance protein
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Facilitator Superfamily Transporter; Export Protein; Permease; Facilitator MFS1 Protein; Facilitator Superfamily Transporter Permease; Facilitator Family Transporter; MFS Family Multidrug Resistance Protein; Facilitator Superfamily Permease; Antibiotic Transporter; Arabinose Efflux Permease Family Protein; Permease Of Facilitator Superfamily Protein; Inner Membrane Protein; MFS Transporter; MFS Permease; Antibiotic Efflux Protein; MFS Superfamily Transporter
Number of amino acids: Translated: 408; Mature: 407
Protein sequence:
>408_residues MPPSSALPAKFHRLAWSNLTAQSAEQIALAAAPIVAVLALGVGEGETGILQTALTAPFVLFAIPAGLLADRMPRRLLMAA AEALRALALLAILMAFAAGVLTLPLLATLGFAAVCGTVVFSVAAPALVPSLVSPAQLAAANARIELARTVAFAAGPAVGG MLVGWIGVAPAFGVAAALSLIATLCLAGITEPVRPPAPRRHPFADIREGAAFVLNHSLLRPVFVTQFIFNTAHFLLLAVF VPYAVHRLGLSAGGVGTVLSMFGVGMVCGALLATRMLRRLPFGTVIGLGPVTGFAAALMMALTTFFPSPLLAALSFFMLG AGPILWVISTTTLRQSVTPAGLLGRVSAINILSYGARPAGSLLGAIVGGRYGADACLYLAAGIFGLQALIILTSPAVAIA RQPEPQPA
Sequences:
>Translated_408_residues MPPSSALPAKFHRLAWSNLTAQSAEQIALAAAPIVAVLALGVGEGETGILQTALTAPFVLFAIPAGLLADRMPRRLLMAA AEALRALALLAILMAFAAGVLTLPLLATLGFAAVCGTVVFSVAAPALVPSLVSPAQLAAANARIELARTVAFAAGPAVGG MLVGWIGVAPAFGVAAALSLIATLCLAGITEPVRPPAPRRHPFADIREGAAFVLNHSLLRPVFVTQFIFNTAHFLLLAVF VPYAVHRLGLSAGGVGTVLSMFGVGMVCGALLATRMLRRLPFGTVIGLGPVTGFAAALMMALTTFFPSPLLAALSFFMLG AGPILWVISTTTLRQSVTPAGLLGRVSAINILSYGARPAGSLLGAIVGGRYGADACLYLAAGIFGLQALIILTSPAVAIA RQPEPQPA >Mature_407_residues PPSSALPAKFHRLAWSNLTAQSAEQIALAAAPIVAVLALGVGEGETGILQTALTAPFVLFAIPAGLLADRMPRRLLMAAA EALRALALLAILMAFAAGVLTLPLLATLGFAAVCGTVVFSVAAPALVPSLVSPAQLAAANARIELARTVAFAAGPAVGGM LVGWIGVAPAFGVAAALSLIATLCLAGITEPVRPPAPRRHPFADIREGAAFVLNHSLLRPVFVTQFIFNTAHFLLLAVFV PYAVHRLGLSAGGVGTVLSMFGVGMVCGALLATRMLRRLPFGTVIGLGPVTGFAAALMMALTTFFPSPLLAALSFFMLGA GPILWVISTTTLRQSVTPAGLLGRVSAINILSYGARPAGSLLGAIVGGRYGADACLYLAAGIFGLQALIILTSPAVAIAR QPEPQPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41557; Mature: 41426
Theoretical pI: Translated: 11.36; Mature: 11.36
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPSSALPAKFHRLAWSNLTAQSAEQIALAAAPIVAVLALGVGEGETGILQTALTAPFVL CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH FAIPAGLLADRMPRRLLMAAAEALRALALLAILMAFAAGVLTLPLLATLGFAAVCGTVVF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SVAAPALVPSLVSPAQLAAANARIELARTVAFAAGPAVGGMLVGWIGVAPAFGVAAALSL HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH IATLCLAGITEPVRPPAPRRHPFADIREGAAFVLNHSLLRPVFVTQFIFNTAHFLLLAVF HHHHHHHHCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VPYAVHRLGLSAGGVGTVLSMFGVGMVCGALLATRMLRRLPFGTVIGLGPVTGFAAALMM HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCHHHHHHHHHHH ALTTFFPSPLLAALSFFMLGAGPILWVISTTTLRQSVTPAGLLGRVSAINILSYGARPAG HHHHHCCCHHHHHHHHHHHCCCHHEEEEEHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHH SLLGAIVGGRYGADACLYLAAGIFGLQALIILTSPAVAIARQPEPQPA HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCC >Mature Secondary Structure PPSSALPAKFHRLAWSNLTAQSAEQIALAAAPIVAVLALGVGEGETGILQTALTAPFVL CCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH FAIPAGLLADRMPRRLLMAAAEALRALALLAILMAFAAGVLTLPLLATLGFAAVCGTVVF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SVAAPALVPSLVSPAQLAAANARIELARTVAFAAGPAVGGMLVGWIGVAPAFGVAAALSL HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH IATLCLAGITEPVRPPAPRRHPFADIREGAAFVLNHSLLRPVFVTQFIFNTAHFLLLAVF HHHHHHHHCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VPYAVHRLGLSAGGVGTVLSMFGVGMVCGALLATRMLRRLPFGTVIGLGPVTGFAAALMM HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCHHHHHHHHHHH ALTTFFPSPLLAALSFFMLGAGPILWVISTTTLRQSVTPAGLLGRVSAINILSYGARPAG HHHHHCCCHHHHHHHHHHHCCCHHEEEEEHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHH SLLGAIVGGRYGADACLYLAAGIFGLQALIILTSPAVAIARQPEPQPA HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA