Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146341269
Identifier: 146341269
GI number: 146341269
Start: 4537300
End: 4538337
Strand: Reverse
Name: 146341269
Synonym: BRADO4346
Alternate gene names: NA
Gene position: 4538337-4537300 (Counterclockwise)
Preceding gene: 146341270
Following gene: 146341268
Centisome position: 60.86
GC content: 59.54
Gene sequence:
>1038_bases ATGTACAGAACGGCTGCGGGCGACGAGATATTCGTGATCGACGGGCACACCCACTTCTGGGACGGCAGCCCGGCCAACCA GAAGAACATTCACGGCAAGCAGTTCATCGACTGCTTCTATGCCTACCACGCCAACCTCAGCCCGCCCTCGGAGAAGTGGG AAAAGGAGAAGTTCGAAAAATACGACGCGAAGACCATGTTCGACGATCTGTTCGTGTCGGGCTACGACGACATGGCCATC CTGCAGCCCACATACCTGACGGATTTCTACAAGAACGGCTTCAACACCACGGAGCGCAACGCCGCGATGAAGAAGAGCCA TCCGGACCGCTTCATCCTCAATGGCGCCTTCGATCCGCGGGACGGCAGCAAGGGCCTCGAGGATCTGCACGCGCTGGCCG AGAAATACAAGCTGCAGGGTGTGAAGCTGTACACCGCCGAATGGCGCGGCGAGTCCAAGGGCTACAAGCTCTCCGACAAG GACTCCTACAAATATCTCGAGGCGGCGCAGAAGCTCGGCATCAAGAACGTCCACGTCCACAAGGGGCCGACGATCATTCC CCTGAACCGGGATGCGTTCGATGTCGCCGACATCGACGACGTCGCCACCTCGTTCCAGGATCTCAACTTCATCGTCGAAC ATTGCGGGCTACCGCGGCTGGACGATTTCTGCTGGATCGCCACCCAGGAGACCAATGTCTATGCGGGGATCGCGGTGGCT CTCCCGTTCATCCATTCGCGGCCGGGCTATTTCGCCCATGTGATGTCGGAGCTGCTGTTCTGGCTCGGGCCGGACAAGAT CCTGTATGGCAGCGACTACGGCATCTGGACTCCGAAATGGCTGATCGACAAGTTCATGGCGTTTGAGATTCCGGAGGACC TCACCAAGGAGACCGGATCGGTCCTGACGCTGGAGAACAAGACCAAGATCCTCGGTCTCAACGCCGCGCGGCTCTACGGC ATTGACGTCGAAGCCCAGAAGAAGAAGATCCGCGCCGGCGGCGGCTACGCGCATCTGTCCGAACCCGTTCCGGCGTGA
Upstream 100 bases:
>100_bases GCCTGCGGATGCCCGGCCGGCTTCGCGCCGGCCGGGCCAACCTGGCTCTGCCATCAACGGCAGGCCTCATCACAATCAAT CTGGGAGCGGGAGACGCGCG
Downstream 100 bases:
>100_bases CGGCCATGAGCGGGCGGATCGTAGCGGGCCTGCCGGACCATCACCGGCAGGCGGAGCAGTGGCACATCGACACGCGTCAG GCCGAAGTGTGGGCTTCGCT
Product: putative amidohydrolase
Products: NA
Alternate protein names: Amidohydrolase Family Protein; Metal-Dependent Hydrolase Of TIM-Barrel Fold; Metal-Dependent Hydrolase Of TIM-Barrel Fold Protein
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MYRTAAGDEIFVIDGHTHFWDGSPANQKNIHGKQFIDCFYAYHANLSPPSEKWEKEKFEKYDAKTMFDDLFVSGYDDMAI LQPTYLTDFYKNGFNTTERNAAMKKSHPDRFILNGAFDPRDGSKGLEDLHALAEKYKLQGVKLYTAEWRGESKGYKLSDK DSYKYLEAAQKLGIKNVHVHKGPTIIPLNRDAFDVADIDDVATSFQDLNFIVEHCGLPRLDDFCWIATQETNVYAGIAVA LPFIHSRPGYFAHVMSELLFWLGPDKILYGSDYGIWTPKWLIDKFMAFEIPEDLTKETGSVLTLENKTKILGLNAARLYG IDVEAQKKKIRAGGGYAHLSEPVPA
Sequences:
>Translated_345_residues MYRTAAGDEIFVIDGHTHFWDGSPANQKNIHGKQFIDCFYAYHANLSPPSEKWEKEKFEKYDAKTMFDDLFVSGYDDMAI LQPTYLTDFYKNGFNTTERNAAMKKSHPDRFILNGAFDPRDGSKGLEDLHALAEKYKLQGVKLYTAEWRGESKGYKLSDK DSYKYLEAAQKLGIKNVHVHKGPTIIPLNRDAFDVADIDDVATSFQDLNFIVEHCGLPRLDDFCWIATQETNVYAGIAVA LPFIHSRPGYFAHVMSELLFWLGPDKILYGSDYGIWTPKWLIDKFMAFEIPEDLTKETGSVLTLENKTKILGLNAARLYG IDVEAQKKKIRAGGGYAHLSEPVPA >Mature_345_residues MYRTAAGDEIFVIDGHTHFWDGSPANQKNIHGKQFIDCFYAYHANLSPPSEKWEKEKFEKYDAKTMFDDLFVSGYDDMAI LQPTYLTDFYKNGFNTTERNAAMKKSHPDRFILNGAFDPRDGSKGLEDLHALAEKYKLQGVKLYTAEWRGESKGYKLSDK DSYKYLEAAQKLGIKNVHVHKGPTIIPLNRDAFDVADIDDVATSFQDLNFIVEHCGLPRLDDFCWIATQETNVYAGIAVA LPFIHSRPGYFAHVMSELLFWLGPDKILYGSDYGIWTPKWLIDKFMAFEIPEDLTKETGSVLTLENKTKILGLNAARLYG IDVEAQKKKIRAGGGYAHLSEPVPA
Specific function: Unknown
COG id: COG2159
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39134; Mature: 39134
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRTAAGDEIFVIDGHTHFWDGSPANQKNIHGKQFIDCFYAYHANLSPPSEKWEKEKFEK CCCCCCCCEEEEECCCCEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH YDAKTMFDDLFVSGYDDMAILQPTYLTDFYKNGFNTTERNAAMKKSHPDRFILNGAFDPR HHHHHHHHHHHHCCCCCCEEECHHHHHHHHHCCCCCCHHHHHHHCCCCCEEEEECCCCCC DGSKGLEDLHALAEKYKLQGVKLYTAEWRGESKGYKLSDKDSYKYLEAAQKLGIKNVHVH CCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEE KGPTIIPLNRDAFDVADIDDVATSFQDLNFIVEHCGLPRLDDFCWIATQETNVYAGIAVA CCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEHHHHH LPFIHSRPGYFAHVMSELLFWLGPDKILYGSDYGIWTPKWLIDKFMAFEIPEDLTKETGS HHHHHCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHCCCC VLTLENKTKILGLNAARLYGIDVEAQKKKIRAGGGYAHLSEPVPA EEEEECCCEEEECCCCEEEECCCHHHHHHHHCCCCEEECCCCCCC >Mature Secondary Structure MYRTAAGDEIFVIDGHTHFWDGSPANQKNIHGKQFIDCFYAYHANLSPPSEKWEKEKFEK CCCCCCCCEEEEECCCCEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH YDAKTMFDDLFVSGYDDMAILQPTYLTDFYKNGFNTTERNAAMKKSHPDRFILNGAFDPR HHHHHHHHHHHHCCCCCCEEECHHHHHHHHHCCCCCCHHHHHHHCCCCCEEEEECCCCCC DGSKGLEDLHALAEKYKLQGVKLYTAEWRGESKGYKLSDKDSYKYLEAAQKLGIKNVHVH CCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEE KGPTIIPLNRDAFDVADIDDVATSFQDLNFIVEHCGLPRLDDFCWIATQETNVYAGIAVA CCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEHHHHH LPFIHSRPGYFAHVMSELLFWLGPDKILYGSDYGIWTPKWLIDKFMAFEIPEDLTKETGS HHHHHCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHCCCC VLTLENKTKILGLNAARLYGIDVEAQKKKIRAGGGYAHLSEPVPA EEEEECCCEEEECCCCEEEECCCHHHHHHHHCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA