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The map label for this gene is fucU [H]

Identifier: 146341261

GI number: 146341261

Start: 4529551

End: 4530006

Strand: Reverse

Name: fucU [H]

Synonym: BRADO4337

Alternate gene names: 146341261

Gene position: 4530006-4529551 (Counterclockwise)

Preceding gene: 146341262

Following gene: 146341259

Centisome position: 60.75

GC content: 64.69

Gene sequence:

>456_bases
ATGCTGAAGAATCTCGATCCGCTGCTCAATGCCGATGTGCTCTATGCACTCCGTGCGATGGGGCATGGCGACCGCCTCGT
GATCTGCGACACGAATTTTCCGGCGGATGCGATCGCGCGGCAGACGGTGTTCGGCGAGCTTCTGCGCATCGACAATGTCA
GCGCGGCGAGGGCCGTTCAGGCCGTGCTGTCGGTGCTGCCGCTCGACACCTTCATCGACGACGCCGCCGTGCGGATGGAG
GTCGTCGGCCATCCGGACGAGGTCACACCGGTGCAGCAGGAGGTGCAGGCTGCGATCGACCGCGCCGAAGGCAAGCCATG
GCCGCTGGTCGGCGTCGAGCGTTACGCGTTCTACGAGATGGCCAAATCAGCCTATTGCGTCATCGCCACCGGCGAGCGCC
GCTTCTACGGCTGCTTCATCTTCAGCAAGGGCGTCATTGCGCCGGAGGGGGCGTGA

Upstream 100 bases:

>100_bases
GGCCGCGGCTGAAGCGCTGCGCTCGGACCTGATCAGCCGGATCGATCTTCGCCTGGTCGGCGAGACCAGGCGGCTAGGAC
CGTAGCTCGGGGAGGACCAC

Downstream 100 bases:

>100_bases
TGCCCATGGCAGCAGAGCCACTGGATGAAGTCGTTGGATGAAGTCGTTCAGGGCCTCATGGTTCGAGACCCGCCGCGCGG
CGCTCCTCACGATGATGGTC

Product: putative ABC-type ribose transport system, auxiliary component

Products: NA

Alternate protein names: Fucose 1-epimerase; Type-2 mutarotase [H]

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MLKNLDPLLNADVLYALRAMGHGDRLVICDTNFPADAIARQTVFGELLRIDNVSAARAVQAVLSVLPLDTFIDDAAVRME
VVGHPDEVTPVQQEVQAAIDRAEGKPWPLVGVERYAFYEMAKSAYCVIATGERRFYGCFIFSKGVIAPEGA

Sequences:

>Translated_151_residues
MLKNLDPLLNADVLYALRAMGHGDRLVICDTNFPADAIARQTVFGELLRIDNVSAARAVQAVLSVLPLDTFIDDAAVRME
VVGHPDEVTPVQQEVQAAIDRAEGKPWPLVGVERYAFYEMAKSAYCVIATGERRFYGCFIFSKGVIAPEGA
>Mature_151_residues
MLKNLDPLLNADVLYALRAMGHGDRLVICDTNFPADAIARQTVFGELLRIDNVSAARAVQAVLSVLPLDTFIDDAAVRME
VVGHPDEVTPVQQEVQAAIDRAEGKPWPLVGVERYAFYEMAKSAYCVIATGERRFYGCFIFSKGVIAPEGA

Specific function: Involved in the anomeric conversion of L-fucose [H]

COG id: COG4154

COG function: function code G; Fucose dissimilation pathway protein FucU

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rbsD / fucU family. FucU mutarotase subfamily [H]

Homologues:

Organism=Homo sapiens, GI148596947, Length=149, Percent_Identity=42.2818791946309, Blast_Score=108, Evalue=2e-24,
Organism=Homo sapiens, GI148596951, Length=133, Percent_Identity=41.3533834586466, Blast_Score=93, Evalue=1e-19,
Organism=Escherichia coli, GI1789169, Length=147, Percent_Identity=31.9727891156463, Blast_Score=81, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007721 [H]

Pfam domain/function: PF05025 RbsD_FucU [H]

EC number: NA

Molecular weight: Translated: 16514; Mature: 16514

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKNLDPLLNADVLYALRAMGHGDRLVICDTNFPADAIARQTVFGELLRIDNVSAARAVQ
CCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHH
AVLSVLPLDTFIDDAAVRMEVVGHPDEVTPVQQEVQAAIDRAEGKPWPLVGVERYAFYEM
HHHHHHCHHHHHCCHHEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
AKSAYCVIATGERRFYGCFIFSKGVIAPEGA
HCCCEEEEEECCCEEEEEEEEECCCCCCCCC
>Mature Secondary Structure
MLKNLDPLLNADVLYALRAMGHGDRLVICDTNFPADAIARQTVFGELLRIDNVSAARAVQ
CCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHH
AVLSVLPLDTFIDDAAVRMEVVGHPDEVTPVQQEVQAAIDRAEGKPWPLVGVERYAFYEM
HHHHHHCHHHHHCCHHEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
AKSAYCVIATGERRFYGCFIFSKGVIAPEGA
HCCCEEEEEECCCEEEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA