| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146341238
Identifier: 146341238
GI number: 146341238
Start: 4508328
End: 4509476
Strand: Reverse
Name: 146341238
Synonym: BRADO4314
Alternate gene names: NA
Gene position: 4509476-4508328 (Counterclockwise)
Preceding gene: 146341239
Following gene: 146341237
Centisome position: 60.48
GC content: 65.62
Gene sequence:
>1149_bases TTGACCATCAAGGGCAAGGCCTACATTGCCGGGATCTACGAGCATCCGACTCGGCACGCACCGGACAAATCGACCGCGCA GCTGCATGCCGAGGTTGCCAAGGGCGCGCTGGAGGATGCCGGGCTGAGTGCCAAGGATGTCGACGGCTATTTCTGCGCCG GTGATGCGCCGGGCGGCGCCTGGCCGATGGTCGATTATCTCGGGCTGAAGGTGCGGCACATCGACTCCACCGAGACCGGT GGCTGCTCCTATCTGATCCATGTCGGCCATGCCGCCGAGGCCATCGCCGCGGGCAAGTGCTCGATCGCGCTGATCACGCT CGCCGGCAAGCCGCGCACCGGTCCGATGCCGCCGCGCGCGGCGGGAACCGAGGCCGATTTCGAAGCCGCCTACGGCGCCA CCACCCACAACGCCTACGGCATGTGCGCCATGCGCCACATGCACGACTACGGCACCACCTCGGAGCAACTCGCCTGGATC AAGGTCGCGGCCTCGCATCATGCGCAGTACAATCCGCATGCGATGCTGAAGGAGGTGGTGACGGTCGAGGACGTCATCAA CTCACCGATGATCTCCGATCCGCTGCACCGCATGGATTGCTGCGTCGTCACCGACGGCGGCGGCGCGCTGATCGTCACGA CGCCGGAGATCGCCAAGAGCCTGAAGAAGCCGCTGGTGCGGCTGATCGGCCATGGCGAGGCGATGAAGGGCCCGCGCGGC GGCAAGGATCTCGACCTGACTTACTCGGCCGGCGTGTGGTCCGGCCCGCGCGCCTTCGAGGAAGCGGGGATCACGCCGAA GGACATCAAATACGCCTCGATCTATGACAGCTTCACCATCACCGTGCTGATGCAGCTCGAGGATCTCGGCTTCTGCAAGA AAGGCGAGGGCGGCAAGTTCGTCAGCGATGGCAACCTCATCTCCGGTGTCGGCAAGCTGCCGTTCAACACCGATGGCGGC GGCCTGTGCAGCAACCATCCCGTCAACCGCGGCGGCATGACCAAGGTGATCGAGGCCGTGCGCCAGTTGCGTGGCGAAGC CCATCCCAAGGTGCAGGTGCCGAACTGCGATCTTGCGATTGCTCACGGCACCGGTGGCCTGCTCGGCGTGCGCCACGCCG CCTCGACCTGCATTCTGGAGCGCGTCTGA
Upstream 100 bases:
>100_bases CTCCACCCTGCGGAATATTTTCCGCGCTTGCCAAGCCACCTGCAACGGTCCAGAAAATCTCCAACCATCGGGCTGGAAAC GACGACAAGCGGAGACGGAG
Downstream 100 bases:
>100_bases TGTCTGAAGCCAAGAAACTGCCGGCCCCGATCACCAATCCCGAGACCAAGCCGTTCTGGGACGCCGCCGCCGAGGGCAAG TTCCTGATCAAGCGCTGCAC
Product: acetyl-CoA acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 382; Mature: 381
Protein sequence:
>382_residues MTIKGKAYIAGIYEHPTRHAPDKSTAQLHAEVAKGALEDAGLSAKDVDGYFCAGDAPGGAWPMVDYLGLKVRHIDSTETG GCSYLIHVGHAAEAIAAGKCSIALITLAGKPRTGPMPPRAAGTEADFEAAYGATTHNAYGMCAMRHMHDYGTTSEQLAWI KVAASHHAQYNPHAMLKEVVTVEDVINSPMISDPLHRMDCCVVTDGGGALIVTTPEIAKSLKKPLVRLIGHGEAMKGPRG GKDLDLTYSAGVWSGPRAFEEAGITPKDIKYASIYDSFTITVLMQLEDLGFCKKGEGGKFVSDGNLISGVGKLPFNTDGG GLCSNHPVNRGGMTKVIEAVRQLRGEAHPKVQVPNCDLAIAHGTGGLLGVRHAASTCILERV
Sequences:
>Translated_382_residues MTIKGKAYIAGIYEHPTRHAPDKSTAQLHAEVAKGALEDAGLSAKDVDGYFCAGDAPGGAWPMVDYLGLKVRHIDSTETG GCSYLIHVGHAAEAIAAGKCSIALITLAGKPRTGPMPPRAAGTEADFEAAYGATTHNAYGMCAMRHMHDYGTTSEQLAWI KVAASHHAQYNPHAMLKEVVTVEDVINSPMISDPLHRMDCCVVTDGGGALIVTTPEIAKSLKKPLVRLIGHGEAMKGPRG GKDLDLTYSAGVWSGPRAFEEAGITPKDIKYASIYDSFTITVLMQLEDLGFCKKGEGGKFVSDGNLISGVGKLPFNTDGG GLCSNHPVNRGGMTKVIEAVRQLRGEAHPKVQVPNCDLAIAHGTGGLLGVRHAASTCILERV >Mature_381_residues TIKGKAYIAGIYEHPTRHAPDKSTAQLHAEVAKGALEDAGLSAKDVDGYFCAGDAPGGAWPMVDYLGLKVRHIDSTETGG CSYLIHVGHAAEAIAAGKCSIALITLAGKPRTGPMPPRAAGTEADFEAAYGATTHNAYGMCAMRHMHDYGTTSEQLAWIK VAASHHAQYNPHAMLKEVVTVEDVINSPMISDPLHRMDCCVVTDGGGALIVTTPEIAKSLKKPLVRLIGHGEAMKGPRGG KDLDLTYSAGVWSGPRAFEEAGITPKDIKYASIYDSFTITVLMQLEDLGFCKKGEGGKFVSDGNLISGVGKLPFNTDGGG LCSNHPVNRGGMTKVIEAVRQLRGEAHPKVQVPNCDLAIAHGTGGLLGVRHAASTCILERV
Specific function: Unknown
COG id: COG0183
COG function: function code I; Acetyl-CoA acetyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI19923233, Length=245, Percent_Identity=28.1632653061224, Blast_Score=102, Evalue=9e-22, Organism=Homo sapiens, GI302344762, Length=245, Percent_Identity=28.1632653061224, Blast_Score=101, Evalue=9e-22, Organism=Homo sapiens, GI302344760, Length=245, Percent_Identity=28.1632653061224, Blast_Score=101, Evalue=1e-21, Organism=Homo sapiens, GI302344767, Length=245, Percent_Identity=28.1632653061224, Blast_Score=101, Evalue=1e-21, Organism=Homo sapiens, GI55956775, Length=212, Percent_Identity=25.9433962264151, Blast_Score=81, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17537653, Length=395, Percent_Identity=24.5569620253165, Blast_Score=98, Evalue=8e-21, Organism=Drosophila melanogaster, GI19921506, Length=386, Percent_Identity=27.4611398963731, Blast_Score=132, Evalue=5e-31, Organism=Drosophila melanogaster, GI24585051, Length=387, Percent_Identity=28.1653746770026, Blast_Score=130, Evalue=1e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002155 - InterPro: IPR016039 - InterPro: IPR016038 - InterPro: IPR020617 - InterPro: IPR020616 [H]
Pfam domain/function: PF02803 Thiolase_C; PF00108 Thiolase_N [H]
EC number: NA
Molecular weight: Translated: 40279; Mature: 40147
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIKGKAYIAGIYEHPTRHAPDKSTAQLHAEVAKGALEDAGLSAKDVDGYFCAGDAPGGA CCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCC WPMVDYLGLKVRHIDSTETGGCSYLIHVGHAAEAIAAGKCSIALITLAGKPRTGPMPPRA CCHHHHHCCEEEEECCCCCCCEEEEEEECCHHHHHHCCCCEEEEEEEECCCCCCCCCCCC AGTEADFEAAYGATTHNAYGMCAMRHMHDYGTTSEQLAWIKVAASHHAQYNPHAMLKEVV CCCCCCCHHHCCCCCCCCHHHHHHHHHHHCCCCHHHEEEEEEEECCCCCCCHHHHHHHHH TVEDVINSPMISDPLHRMDCCVVTDGGGALIVTTPEIAKSLKKPLVRLIGHGEAMKGPRG HHHHHHCCCCCCCCHHHCCEEEEECCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCC GKDLDLTYSAGVWSGPRAFEEAGITPKDIKYASIYDSFTITVLMQLEDLGFCKKGEGGKF CCCEEEEEECCCCCCCHHHHHCCCCHHHEEEEEECCCEEEEEEEEHHHCCCCCCCCCCCE VSDGNLISGVGKLPFNTDGGGLCSNHPVNRGGMTKVIEAVRQLRGEAHPKVQVPNCDLAI EECCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEECCCCCEEE AHGTGGLLGVRHAASTCILERV EECCCCEEHHHHHHHHHHHCCC >Mature Secondary Structure TIKGKAYIAGIYEHPTRHAPDKSTAQLHAEVAKGALEDAGLSAKDVDGYFCAGDAPGGA CCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCC WPMVDYLGLKVRHIDSTETGGCSYLIHVGHAAEAIAAGKCSIALITLAGKPRTGPMPPRA CCHHHHHCCEEEEECCCCCCCEEEEEEECCHHHHHHCCCCEEEEEEEECCCCCCCCCCCC AGTEADFEAAYGATTHNAYGMCAMRHMHDYGTTSEQLAWIKVAASHHAQYNPHAMLKEVV CCCCCCCHHHCCCCCCCCHHHHHHHHHHHCCCCHHHEEEEEEEECCCCCCCHHHHHHHHH TVEDVINSPMISDPLHRMDCCVVTDGGGALIVTTPEIAKSLKKPLVRLIGHGEAMKGPRG HHHHHHCCCCCCCCHHHCCEEEEECCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCC GKDLDLTYSAGVWSGPRAFEEAGITPKDIKYASIYDSFTITVLMQLEDLGFCKKGEGGKF CCCEEEEEECCCCCCCHHHHHCCCCHHHEEEEEECCCEEEEEEEEHHHCCCCCCCCCCCE VSDGNLISGVGKLPFNTDGGGLCSNHPVNRGGMTKVIEAVRQLRGEAHPKVQVPNCDLAI EECCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEECCCCCEEE AHGTGGLLGVRHAASTCILERV EECCCCEEHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]