| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is metI [H]
Identifier: 146341213
GI number: 146341213
Start: 4488443
End: 4489108
Strand: Reverse
Name: metI [H]
Synonym: BRADO4287
Alternate gene names: 146341213
Gene position: 4489108-4488443 (Counterclockwise)
Preceding gene: 146341214
Following gene: 146341212
Centisome position: 60.2
GC content: 69.22
Gene sequence:
>666_bases ATGTCGCCTGAACTCATCAACCTGATCGTCCAGGCCACCGGCGAGAGCCTCTTCATGGTGTCGACTGCGGCGCTGGTCGC GACCGCCCTCGGCCTGCCGCTCGGCGTCTTCCTGGCGACCAGCCGCACGGGTGAGTTGTTCGCGGCTCCCGCCGTGAACG CGGCGCTCGGGGTGGTCGTCAATGCCACGCGCTCGACGCCCTTCATCATCCTCGTCGTCGCGATCATCCCGTTCACGCGA CTCGTCGCCGGCACCTCGATCGGCTCGGGCGCTGCGATCGTGCCGCTGACGGTGGCGGCGACCCCGTTCATCGCGCGGCT GGTCGAGGCGGCCATCCGCGAGGTCGATGCCGGCCTGATCGAGACCGCGTCCTCGTTCGGCGCGACGCCGCTGCAGATCG TGTTCAAGGTGCTGATTCCGGAAGCGCTGCCCGGCCTGGTGCTGGCGCTGACGCTCGCGGTGGTCAGCCTGCTCGGCTAC TCCGCGATGGTCGGCGCCGTCGGCGGCGGCGGCCTCGGCGATCTCGGCATCCGCTATGGCTACCAGCGCTTCATGCCGGA GATGATGCTGGCCGTGGTGGTCGTGCTGATCGCGCTGGTGCAGACGGTGCAGACCATAGGCGATCATCTCGCGCGCCGGC TCAATCGCCGCTTGAGGCAGCGCTGA
Upstream 100 bases:
>100_bases GTCGGCTCGCTGATCCTCGGCATTCCCGGCGGCGAGGCCGCGGCGCGGCAGACGCTCGCTTATCTTACTCAGCATCGGTT CGCAGCGGAGCGTCTCGGCT
Downstream 100 bases:
>100_bases GCTGACGCAGACACGGATACAATCGTCGCAGCCGAGCAGGAGGAAACGACCATGAACGAGATCGTCGAACGACCCAGGAA GTTTGCGCTGGTCGAGCGCG
Product: D-and L-methionine ABC transporter permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 221; Mature: 220
Protein sequence:
>221_residues MSPELINLIVQATGESLFMVSTAALVATALGLPLGVFLATSRTGELFAAPAVNAALGVVVNATRSTPFIILVVAIIPFTR LVAGTSIGSGAAIVPLTVAATPFIARLVEAAIREVDAGLIETASSFGATPLQIVFKVLIPEALPGLVLALTLAVVSLLGY SAMVGAVGGGGLGDLGIRYGYQRFMPEMMLAVVVVLIALVQTVQTIGDHLARRLNRRLRQR
Sequences:
>Translated_221_residues MSPELINLIVQATGESLFMVSTAALVATALGLPLGVFLATSRTGELFAAPAVNAALGVVVNATRSTPFIILVVAIIPFTR LVAGTSIGSGAAIVPLTVAATPFIARLVEAAIREVDAGLIETASSFGATPLQIVFKVLIPEALPGLVLALTLAVVSLLGY SAMVGAVGGGGLGDLGIRYGYQRFMPEMMLAVVVVLIALVQTVQTIGDHLARRLNRRLRQR >Mature_220_residues SPELINLIVQATGESLFMVSTAALVATALGLPLGVFLATSRTGELFAAPAVNAALGVVVNATRSTPFIILVVAIIPFTRL VAGTSIGSGAAIVPLTVAATPFIARLVEAAIREVDAGLIETASSFGATPLQIVFKVLIPEALPGLVLALTLAVVSLLGYS AMVGAVGGGGLGDLGIRYGYQRFMPEMMLAVVVVLIALVQTVQTIGDHLARRLNRRLRQR
Specific function: Part of the binding-protein-dependent transport system for D-methionine. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG2011
COG function: function code P; ABC-type metal ion transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786397, Length=217, Percent_Identity=49.3087557603687, Blast_Score=164, Evalue=4e-42, Organism=Escherichia coli, GI1789033, Length=196, Percent_Identity=31.6326530612245, Blast_Score=66, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 22843; Mature: 22711
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPELINLIVQATGESLFMVSTAALVATALGLPLGVFLATSRTGELFAAPAVNAALGVVV CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHE NATRSTPFIILVVAIIPFTRLVAGTSIGSGAAIVPLTVAATPFIARLVEAAIREVDAGLI ECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ETASSFGATPLQIVFKVLIPEALPGLVLALTLAVVSLLGYSAMVGAVGGGGLGDLGIRYG HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH YQRFMPEMMLAVVVVLIALVQTVQTIGDHLARRLNRRLRQR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SPELINLIVQATGESLFMVSTAALVATALGLPLGVFLATSRTGELFAAPAVNAALGVVV CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHE NATRSTPFIILVVAIIPFTRLVAGTSIGSGAAIVPLTVAATPFIARLVEAAIREVDAGLI ECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ETASSFGATPLQIVFKVLIPEALPGLVLALTLAVVSLLGYSAMVGAVGGGGLGDLGIRYG HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH YQRFMPEMMLAVVVVLIALVQTVQTIGDHLARRLNRRLRQR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]