| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146341209
Identifier: 146341209
GI number: 146341209
Start: 4483123
End: 4484718
Strand: Reverse
Name: 146341209
Synonym: BRADO4283
Alternate gene names: NA
Gene position: 4484718-4483123 (Counterclockwise)
Preceding gene: 146341211
Following gene: 146341208
Centisome position: 60.14
GC content: 70.61
Gene sequence:
>1596_bases GTGACCGCTTCTGCAACTGATCCACTTGCGCTCACCGCTGACGTGCTCGTGATTGGCGGCGGCATGGCCGGCGCATGGGC CGCGGTCTCGGCTGCGCGTGCTGGCGCGCGGGTGATCCTCGTCGACAAGGGCTATTGCGGCACCAGCGGCGTCACGGCCG CGGCGGGCCCGGGCCATTGGTGGGTGCCGCCTGATGCGCGCGCGCAGGCCGTCAGCCAGCGTCTCGCCGCCGGGCTCGGG CTCGGCGAGGCCGCTTGGATGCACGCGATCATCGACGAGACCTGGCGCACGCTGCCGACGCTCGCGAGCCACTATGCGTT TGGCATCGACCATGACGGGCAGACCAATTATCGCGCCGTTCGCGGCCCCGAATACATGCGGGCGCTGCGCGCGGTCGCGC GGGAGAGTGGCGTCACGATCCTCGACCATTCGCCGGTGCTGGAGCTGCTGGCGCGCGGCGACGGCACGATCGGCGGCGCA CGAGGCCTTCGCCGGCAGGACGGCGATCGGCCTTACGAGATCGCCGCAGGCGCGACCGTGCTGGCGGCCGGCGGCACCAG CTTCCTGTCGCACCTCCTGGGATCGCGCACCAACACCGGCGACGGCTATCTGCTCGCGGCGGAGGCGGGCGCCGAGCTGT CGGGCATGGAGTTCACCGCGGCCTACACGATCGCGCCGGCGCATTCGACCATGACGCGCAGCATGGCCTATGCGTTCGCG ACCTATTACGACACTGACGGCCGGGAGCTCGATCTCCCGTTCGGACCGCAGCAGACGATCGGGTTGGCGAGAGCGCTGCT CGCGGGTCCCGTGTTCTGCTCGCTGCATCGGCTGCCCGACGATATCAAGGCCCGGCTGCACACGATCTCGCCGAACGTGC CGCTGGTGTTCGATCGCTGGGGCATCGATCCCTGGCGCGATCGCTTCGAGGTCACGCTGCACAATGACGGCACCATCCGC GGGCTCGGCGGCGTCAGGGTCGACGACGTCGATGGCCGCACGTCGGTACCGGGGCTGTTCGTCGCCGGCGACAATGCCTC GCGCGAGAAGGTGGCCGGTGCGATCTCCGGCGGCGGCAACATCAATTCGGCCTGGGCGCTGACCTCCGGCGTCCGCGCGG GACAGGCCGCCGCGCGGCTGTCGCGTAGCATCGGTGCAAAAGCCTCGACCTTGACGCCGCTCGGGAAGGCCGGCCTGCGG CCGCACTTGCGGACCCGTGCGCTCGATCACGACGCCATCAGGGCCGGCGTCCGCGCCGAGATGCATCCCTTCGACAAGAC CCTGTTCCGGAAGGAGTCGACGCTGGCGGCGTCGCAGCGCGCGCTCGATGGTCTCTGGCGCGAGATCTCCGACCATGCGG GCGGCGATGTCATGCGCTCGCGTGAGACGGCGGCGCTGGTCGCCACGGCACGCTGGTCGGTCGCGACCGCGCGCCGCCGG ACCGAGAGTAGGGGCCTGCATCGCAGGATCGATCATCCCGGCCTCGACCCAAACCTGGCGGTGCGCCTCGTCAGCCGAGG CCTCGATCGGGTCGAGATCACAGCCGACACGTGCCACGCGGCGGACGCTCCGATCGAGCTGGAAGCCGCGTCATGA
Upstream 100 bases:
>100_bases TTTGCGCGCAGGGCTGCGGAGTTCGGACCATGATAGCGCGGGCGATGACGGCAGGAACAGCGGGAGCGCGCGCCTTGCGG ATGCCGCGTCGGGTCGCCTC
Downstream 100 bases:
>100_bases TCGAGCTCATCCTTGCCGATCGCTGCACGGATTGCGGCGCCTGTGTCGACGTGTGCCCGACCAACGTGCTCGACCGCGCG GTGTCGGGGCCGCCGCTGCT
Product: putative oxidoreductase
Products: NA
Alternate protein names: FAD Dependent Oxidoreductase; FAD-Dependent Pyridine Nucleotide-Disulphide Oxidoreductase; Oxidoreductase Putative L-Aspartate Oxidase; Glucose-Inhibited Division Protein A; Oxidoreductase Protein; Fumarate Reductase Flavoprotein Subunit; Oxidoreductase; Fumarate/Succinate Reductase Flavoprotein Subunit; Oxidoreductase Flavoprotein AsfA; Pyridine Nucleotide-Disulfide Oxidoreductase
Number of amino acids: Translated: 531; Mature: 530
Protein sequence:
>531_residues MTASATDPLALTADVLVIGGGMAGAWAAVSAARAGARVILVDKGYCGTSGVTAAAGPGHWWVPPDARAQAVSQRLAAGLG LGEAAWMHAIIDETWRTLPTLASHYAFGIDHDGQTNYRAVRGPEYMRALRAVARESGVTILDHSPVLELLARGDGTIGGA RGLRRQDGDRPYEIAAGATVLAAGGTSFLSHLLGSRTNTGDGYLLAAEAGAELSGMEFTAAYTIAPAHSTMTRSMAYAFA TYYDTDGRELDLPFGPQQTIGLARALLAGPVFCSLHRLPDDIKARLHTISPNVPLVFDRWGIDPWRDRFEVTLHNDGTIR GLGGVRVDDVDGRTSVPGLFVAGDNASREKVAGAISGGGNINSAWALTSGVRAGQAAARLSRSIGAKASTLTPLGKAGLR PHLRTRALDHDAIRAGVRAEMHPFDKTLFRKESTLAASQRALDGLWREISDHAGGDVMRSRETAALVATARWSVATARRR TESRGLHRRIDHPGLDPNLAVRLVSRGLDRVEITADTCHAADAPIELEAAS
Sequences:
>Translated_531_residues MTASATDPLALTADVLVIGGGMAGAWAAVSAARAGARVILVDKGYCGTSGVTAAAGPGHWWVPPDARAQAVSQRLAAGLG LGEAAWMHAIIDETWRTLPTLASHYAFGIDHDGQTNYRAVRGPEYMRALRAVARESGVTILDHSPVLELLARGDGTIGGA RGLRRQDGDRPYEIAAGATVLAAGGTSFLSHLLGSRTNTGDGYLLAAEAGAELSGMEFTAAYTIAPAHSTMTRSMAYAFA TYYDTDGRELDLPFGPQQTIGLARALLAGPVFCSLHRLPDDIKARLHTISPNVPLVFDRWGIDPWRDRFEVTLHNDGTIR GLGGVRVDDVDGRTSVPGLFVAGDNASREKVAGAISGGGNINSAWALTSGVRAGQAAARLSRSIGAKASTLTPLGKAGLR PHLRTRALDHDAIRAGVRAEMHPFDKTLFRKESTLAASQRALDGLWREISDHAGGDVMRSRETAALVATARWSVATARRR TESRGLHRRIDHPGLDPNLAVRLVSRGLDRVEITADTCHAADAPIELEAAS >Mature_530_residues TASATDPLALTADVLVIGGGMAGAWAAVSAARAGARVILVDKGYCGTSGVTAAAGPGHWWVPPDARAQAVSQRLAAGLGL GEAAWMHAIIDETWRTLPTLASHYAFGIDHDGQTNYRAVRGPEYMRALRAVARESGVTILDHSPVLELLARGDGTIGGAR GLRRQDGDRPYEIAAGATVLAAGGTSFLSHLLGSRTNTGDGYLLAAEAGAELSGMEFTAAYTIAPAHSTMTRSMAYAFAT YYDTDGRELDLPFGPQQTIGLARALLAGPVFCSLHRLPDDIKARLHTISPNVPLVFDRWGIDPWRDRFEVTLHNDGTIRG LGGVRVDDVDGRTSVPGLFVAGDNASREKVAGAISGGGNINSAWALTSGVRAGQAAARLSRSIGAKASTLTPLGKAGLRP HLRTRALDHDAIRAGVRAEMHPFDKTLFRKESTLAASQRALDGLWREISDHAGGDVMRSRETAALVATARWSVATARRRT ESRGLHRRIDHPGLDPNLAVRLVSRGLDRVEITADTCHAADAPIELEAAS
Specific function: Unknown
COG id: COG1053
COG function: function code C; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56109; Mature: 55978
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTASATDPLALTADVLVIGGGMAGAWAAVSAARAGARVILVDKGYCGTSGVTAAAGPGHW CCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCEECCCCCCC WVPPDARAQAVSQRLAAGLGLGEAAWMHAIIDETWRTLPTLASHYAFGIDHDGQTNYRAV CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEE RGPEYMRALRAVARESGVTILDHSPVLELLARGDGTIGGARGLRRQDGDRPYEIAAGATV CCHHHHHHHHHHHHHCCCEEEECCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCEE LAAGGTSFLSHLLGSRTNTGDGYLLAAEAGAELSGMEFTAAYTIAPAHSTMTRSMAYAFA EECCCHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHH TYYDTDGRELDLPFGPQQTIGLARALLAGPVFCSLHRLPDDIKARLHTISPNVPLVFDRW EEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEEEECCCCCEEEECC GIDPWRDRFEVTLHNDGTIRGLGGVRVDDVDGRTSVPGLFVAGDNASREKVAGAISGGGN CCCCCCCCEEEEEECCCEEEECCCEEEECCCCCCCCCEEEEECCCCCHHHHHEEECCCCC INSAWALTSGVRAGQAAARLSRSIGAKASTLTPLGKAGLRPHLRTRALDHDAIRAGVRAE CCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHCCCCC MHPFDKTLFRKESTLAASQRALDGLWREISDHAGGDVMRSRETAALVATARWSVATARRR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCEEEEEEHHHHHHHHHHH TESRGLHRRIDHPGLDPNLAVRLVSRGLDRVEITADTCHAADAPIELEAAS HHHCCHHHHCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEEECC >Mature Secondary Structure TASATDPLALTADVLVIGGGMAGAWAAVSAARAGARVILVDKGYCGTSGVTAAAGPGHW CCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCEECCCCCCC WVPPDARAQAVSQRLAAGLGLGEAAWMHAIIDETWRTLPTLASHYAFGIDHDGQTNYRAV CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEE RGPEYMRALRAVARESGVTILDHSPVLELLARGDGTIGGARGLRRQDGDRPYEIAAGATV CCHHHHHHHHHHHHHCCCEEEECCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCEE LAAGGTSFLSHLLGSRTNTGDGYLLAAEAGAELSGMEFTAAYTIAPAHSTMTRSMAYAFA EECCCHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHH TYYDTDGRELDLPFGPQQTIGLARALLAGPVFCSLHRLPDDIKARLHTISPNVPLVFDRW EEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEEEECCCCCEEEECC GIDPWRDRFEVTLHNDGTIRGLGGVRVDDVDGRTSVPGLFVAGDNASREKVAGAISGGGN CCCCCCCCEEEEEECCCEEEECCCEEEECCCCCCCCCEEEEECCCCCHHHHHEEECCCCC INSAWALTSGVRAGQAAARLSRSIGAKASTLTPLGKAGLRPHLRTRALDHDAIRAGVRAE CCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHCCCCC MHPFDKTLFRKESTLAASQRALDGLWREISDHAGGDVMRSRETAALVATARWSVATARRR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCEEEEEEHHHHHHHHHHH TESRGLHRRIDHPGLDPNLAVRLVSRGLDRVEITADTCHAADAPIELEAAS HHHCCHHHHCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA