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The map label for this gene is nlpA [H]

Identifier: 146341204

GI number: 146341204

Start: 4479665

End: 4480492

Strand: Direct

Name: nlpA [H]

Synonym: BRADO4278

Alternate gene names: 146341204

Gene position: 4479665-4480492 (Clockwise)

Preceding gene: 146341203

Following gene: 146341210

Centisome position: 60.08

GC content: 61.96

Gene sequence:

>828_bases
ATGCATCACATCACCAGATCGCAATTCGTCGGCCTGCTCGCCGCCTCCGTCCTCTTGATCGTCTCGGTCAGCGGCGCATG
GGCGCAAGCCTCCGAGAAGAAGGAGCTCAAGGTCGGCTTCGTCCCGGGTCCTTACATCGACGAGTTCAAGATCGGCGTCG
CGCCCGAATTGCAAAAGAAGGGCTACCAGATCCGCTACGTCGAGTTCTCGACCGGCCTCGAGGCCAACAATGCCGTGTTC
AAGAGCGAGATCGACGCCAATGTGATGCAGCACACGATCTTTCTGAACTCCTACAATGAGCGGCAGAACACCGACCTCAC
CGGCATCGTGCACGTGCCGACGCCGCCGATGGGGATCTACTCCAAGAAGCACCCGCTCGGCACCAAGATCGGCCAGGGCG
CCAAGATCGCGGTCCCCAACGATCCCGTCAATTTGCAGCGCGCGCTGTGGATCCTGCGCGATCTCGGCCTGATCGAGATC
CGCGACTCCAAGCCGATCGACGTCACCGAACTCGACGTCATCAAGAACCCCGGCGGCATCAAGATCGTCCCGCTCGAGGC
GGCACAGGCGCCGCGCGCGCTCGACGATGTCGACTTCGCCGCCATCCAGGGCAATTTCGCGATCTTCAGCGGCCTGAAGC
TGACCAACGCCTTCGCGCTGGAGAAGATGACGACGCCCTACATCAACGTGGTCGCCGTCAAGCGCGGCAATGCCGAGACC
GCCTGGGCCAAGGACATCGTCGACGGCTACAAGTCACCGGGCTTCAAGGCGGCCATCCTCGCGGATCGCTTCTATGACGG
CTTCACCCTGCCCGACTACATGAAGTGA

Upstream 100 bases:

>100_bases
GGCCATCGCCTGAGCGCCTTTTCACGGGCGGCGCGGAATGCCAACAGGCGCCCGCGCCGCCTTTCGTTTGGTTCAAGCCT
TATCAAGCCTTGGAAGTCAC

Downstream 100 bases:

>100_bases
GCCATCGCGGCGGTCCGTCCCGGGTCGCCGCGAATCTCTCCGGGTCCGCAGTTACTTCAATCCGAAGCCGAGCGCGCGCA
GCGCCTCAGCCAGTTTGTCG

Product: putative D-methionine ABC transporter perisplasmic binding lipoprotein (metQ-like)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MHHITRSQFVGLLAASVLLIVSVSGAWAQASEKKELKVGFVPGPYIDEFKIGVAPELQKKGYQIRYVEFSTGLEANNAVF
KSEIDANVMQHTIFLNSYNERQNTDLTGIVHVPTPPMGIYSKKHPLGTKIGQGAKIAVPNDPVNLQRALWILRDLGLIEI
RDSKPIDVTELDVIKNPGGIKIVPLEAAQAPRALDDVDFAAIQGNFAIFSGLKLTNAFALEKMTTPYINVVAVKRGNAET
AWAKDIVDGYKSPGFKAAILADRFYDGFTLPDYMK

Sequences:

>Translated_275_residues
MHHITRSQFVGLLAASVLLIVSVSGAWAQASEKKELKVGFVPGPYIDEFKIGVAPELQKKGYQIRYVEFSTGLEANNAVF
KSEIDANVMQHTIFLNSYNERQNTDLTGIVHVPTPPMGIYSKKHPLGTKIGQGAKIAVPNDPVNLQRALWILRDLGLIEI
RDSKPIDVTELDVIKNPGGIKIVPLEAAQAPRALDDVDFAAIQGNFAIFSGLKLTNAFALEKMTTPYINVVAVKRGNAET
AWAKDIVDGYKSPGFKAAILADRFYDGFTLPDYMK
>Mature_275_residues
MHHITRSQFVGLLAASVLLIVSVSGAWAQASEKKELKVGFVPGPYIDEFKIGVAPELQKKGYQIRYVEFSTGLEANNAVF
KSEIDANVMQHTIFLNSYNERQNTDLTGIVHVPTPPMGIYSKKHPLGTKIGQGAKIAVPNDPVNLQRALWILRDLGLIEI
RDSKPIDVTELDVIKNPGGIKIVPLEAAQAPRALDDVDFAAIQGNFAIFSGLKLTNAFALEKMTTPYINVVAVKRGNAET
AWAKDIVDGYKSPGFKAAILADRFYDGFTLPDYMK

Specific function: Unknown

COG id: COG1464

COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface antigen

Gene ontology:

Cell location: Cell inner membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpA lipoprotein family [H]

Homologues:

Organism=Escherichia coli, GI1790093, Length=247, Percent_Identity=33.6032388663968, Blast_Score=135, Evalue=4e-33,
Organism=Escherichia coli, GI1786396, Length=261, Percent_Identity=31.0344827586207, Blast_Score=119, Evalue=2e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004872
- InterPro:   IPR004478 [H]

Pfam domain/function: PF03180 Lipoprotein_9 [H]

EC number: NA

Molecular weight: Translated: 30170; Mature: 30170

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHHITRSQFVGLLAASVLLIVSVSGAWAQASEKKELKVGFVPGPYIDEFKIGVAPELQKK
CCCCCHHHHHHHHHHHHHHHEECCCCHHCCCCCCCEEEEECCCCCCCCEECCCCCHHHHC
GYQIRYVEFSTGLEANNAVFKSEIDANVMQHTIFLNSYNERQNTDLTGIVHVPTPPMGIY
CCEEEEEEEECCCCCCCCEEHHHHHHHHEEEEEEEECCCCCCCCCEEEEEECCCCCCCCC
SKKHPLGTKIGQGAKIAVPNDPVNLQRALWILRDLGLIEIRDSKPIDVTELDVIKNPGGI
CCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHCCEEEECCCCCCCEEEEEEEECCCCE
KIVPLEAAQAPRALDDVDFAAIQGNFAIFSGLKLTNAFALEKMTTPYINVVAVKRGNAET
EEEEECCCCCCCCCCCCCEEEEECCEEEEECCCHHHHHHHHHCCCCEEEEEEEECCCCCH
AWAKDIVDGYKSPGFKAAILADRFYDGFTLPDYMK
HHHHHHHHHHCCCCCEEEEEEHHHCCCCCCCCCCC
>Mature Secondary Structure
MHHITRSQFVGLLAASVLLIVSVSGAWAQASEKKELKVGFVPGPYIDEFKIGVAPELQKK
CCCCCHHHHHHHHHHHHHHHEECCCCHHCCCCCCCEEEEECCCCCCCCEECCCCCHHHHC
GYQIRYVEFSTGLEANNAVFKSEIDANVMQHTIFLNSYNERQNTDLTGIVHVPTPPMGIY
CCEEEEEEEECCCCCCCCEEHHHHHHHHEEEEEEEECCCCCCCCCEEEEEECCCCCCCCC
SKKHPLGTKIGQGAKIAVPNDPVNLQRALWILRDLGLIEIRDSKPIDVTELDVIKNPGGI
CCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHCCEEEECCCCCCCEEEEEEEECCCCE
KIVPLEAAQAPRALDDVDFAAIQGNFAIFSGLKLTNAFALEKMTTPYINVVAVKRGNAET
EEEEECCCCCCCCCCCCCEEEEECCEEEEECCCHHHHHHHHHCCCCEEEEEEEECCCCCH
AWAKDIVDGYKSPGFKAAILADRFYDGFTLPDYMK
HHHHHHHHHHCCCCCEEEEEEHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]