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The map label for this gene is ygiV [H]

Identifier: 146341182

GI number: 146341182

Start: 4458520

End: 4459428

Strand: Reverse

Name: ygiV [H]

Synonym: BRADO4255

Alternate gene names: 146341182

Gene position: 4459428-4458520 (Counterclockwise)

Preceding gene: 146341183

Following gene: 146341181

Centisome position: 59.81

GC content: 64.25

Gene sequence:

>909_bases
ATGAAGGCGGCACTGCAGAGCTACCACGCCCGGATGCAGCGGGTGCTTGATCACATCGAGCGCAATCTCGATGACGATCT
GACTTTGGACACGCTGAGCAGTATCGCAGCCTATTCGAAGTACCACTTCCACCGCCAGTTCACCGCGACCTTCGGCCTGT
CAGTGCATCGCTATATTCAGCTCGCCCGCATGAAGCGGGCATCCTACCAGCTGGCCTATCACGATGCGCAGACCGTCACC
GACGTCGCGATGGAGGCCGGCTATGATGCACCGGACGCCTTCGCCCGCGCCTTCCGCCAGCGGTTCGGGCAATCGCCTTC
AGCCTTCCGGAAGTCTCCCGACTGGGAGCCGTGGCTTGCGGCCTTCGGGCCTCTCGACGAAGCGAGGAGCAAGCTCATGC
AGACGACCTTCACCAATACGGACGTGATCATCCGCGACGTGCCGTCCACGCGCGTGGCGATCATGGAGCATCGCGGCGAT
CCCGCCTCGCTCGGTGCCACGATCCAGCGGTTCATTGCCTGGCGCAAGGCCGCAGGTCTGCATCCCACAACGAACCCGAC
CTTCACGATCTGGCGTTCCGAACGACGTCCCGCATCACCCGCCGACTACAGCGTGGATCTCTGCGTCGGTACCGACGAGC
CGATGATCGCAGATGGCGATCAGGTCAAGCTCGGCGAAATTCCCGGCGGGCGATGTGCGGTGCTGCGGGTGGTCGGCAAC
ACCCACAATCTGGAACCCGCCGCCCTCTATCTCTACCGCGACTGGCTGCCGGCCAGCGGCGAGGAGGCGCGCGACTTCCC
GATCTACTGCCAACGGCTGAGCTTCTTTCCCGAGGTGCCGGAGCATCAGACGGCCGCGGACCTGTTTTTGCCGCTGAAGG
CGCGCGCCGATCAGCCGCGGCCAGTCTAG

Upstream 100 bases:

>100_bases
AACACCACCACAGCTCCGCGCTTCGCCATAAATCCGCAAGATCGATCGAGCACGGCCGATCCGAGCCTGCTTAAGCTTTG
CTGCCACGGAGCACGGACCG

Downstream 100 bases:

>100_bases
ACGGGTTCCAGTTCCCTTCGGGAACTCGGCTTAAGCGTCGACGTTGATGCTGCGGCACAACCAGGGCCACACACCCTGGC
ATTGAACCTTTGCGCCGACG

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MKAALQSYHARMQRVLDHIERNLDDDLTLDTLSSIAAYSKYHFHRQFTATFGLSVHRYIQLARMKRASYQLAYHDAQTVT
DVAMEAGYDAPDAFARAFRQRFGQSPSAFRKSPDWEPWLAAFGPLDEARSKLMQTTFTNTDVIIRDVPSTRVAIMEHRGD
PASLGATIQRFIAWRKAAGLHPTTNPTFTIWRSERRPASPADYSVDLCVGTDEPMIADGDQVKLGEIPGGRCAVLRVVGN
THNLEPAALYLYRDWLPASGEEARDFPIYCQRLSFFPEVPEHQTAADLFLPLKARADQPRPV

Sequences:

>Translated_302_residues
MKAALQSYHARMQRVLDHIERNLDDDLTLDTLSSIAAYSKYHFHRQFTATFGLSVHRYIQLARMKRASYQLAYHDAQTVT
DVAMEAGYDAPDAFARAFRQRFGQSPSAFRKSPDWEPWLAAFGPLDEARSKLMQTTFTNTDVIIRDVPSTRVAIMEHRGD
PASLGATIQRFIAWRKAAGLHPTTNPTFTIWRSERRPASPADYSVDLCVGTDEPMIADGDQVKLGEIPGGRCAVLRVVGN
THNLEPAALYLYRDWLPASGEEARDFPIYCQRLSFFPEVPEHQTAADLFLPLKARADQPRPV
>Mature_302_residues
MKAALQSYHARMQRVLDHIERNLDDDLTLDTLSSIAAYSKYHFHRQFTATFGLSVHRYIQLARMKRASYQLAYHDAQTVT
DVAMEAGYDAPDAFARAFRQRFGQSPSAFRKSPDWEPWLAAFGPLDEARSKLMQTTFTNTDVIIRDVPSTRVAIMEHRGD
PASLGATIQRFIAWRKAAGLHPTTNPTFTIWRSERRPASPADYSVDLCVGTDEPMIADGDQVKLGEIPGGRCAVLRVVGN
THNLEPAALYLYRDWLPASGEEARDFPIYCQRLSFFPEVPEHQTAADLFLPLKARADQPRPV

Specific function: Represses expression of mcbR [H]

COG id: COG3449

COG function: function code L; DNA gyrase inhibitor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI48994918, Length=153, Percent_Identity=35.2941176470588, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1790857, Length=253, Percent_Identity=26.0869565217391, Blast_Score=76, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010499
- InterPro:   IPR011256 [H]

Pfam domain/function: PF06445 AraC_E_bind [H]

EC number: NA

Molecular weight: Translated: 34098; Mature: 34098

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAALQSYHARMQRVLDHIERNLDDDLTLDTLSSIAAYSKYHFHRQFTATFGLSVHRYIQ
CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LARMKRASYQLAYHDAQTVTDVAMEAGYDAPDAFARAFRQRFGQSPSAFRKSPDWEPWLA
HHHHHHHHHHEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHCCCCCCCHHHH
AFGPLDEARSKLMQTTFTNTDVIIRDVPSTRVAIMEHRGDPASLGATIQRFIAWRKAAGL
HHCCHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCC
HPTTNPTFTIWRSERRPASPADYSVDLCVGTDEPMIADGDQVKLGEIPGGRCAVLRVVGN
CCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCEECCCCEEEECCCCCCCEEEEEEECC
THNLEPAALYLYRDWLPASGEEARDFPIYCQRLSFFPEVPEHQTAADLFLPLKARADQPR
CCCCCHHEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHEEEHHCCCCCCC
PV
CC
>Mature Secondary Structure
MKAALQSYHARMQRVLDHIERNLDDDLTLDTLSSIAAYSKYHFHRQFTATFGLSVHRYIQ
CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LARMKRASYQLAYHDAQTVTDVAMEAGYDAPDAFARAFRQRFGQSPSAFRKSPDWEPWLA
HHHHHHHHHHEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHCCCCCCCHHHH
AFGPLDEARSKLMQTTFTNTDVIIRDVPSTRVAIMEHRGDPASLGATIQRFIAWRKAAGL
HHCCHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCC
HPTTNPTFTIWRSERRPASPADYSVDLCVGTDEPMIADGDQVKLGEIPGGRCAVLRVVGN
CCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCEECCCCEEEECCCCCCCEEEEEEECC
THNLEPAALYLYRDWLPASGEEARDFPIYCQRLSFFPEVPEHQTAADLFLPLKARADQPR
CCCCCHHEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHEEEHHCCCCCCC
PV
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]