Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146341171
Identifier: 146341171
GI number: 146341171
Start: 4446379
End: 4447488
Strand: Direct
Name: 146341171
Synonym: BRADO4244
Alternate gene names: NA
Gene position: 4446379-4447488 (Clockwise)
Preceding gene: 146341170
Following gene: 146341172
Centisome position: 59.63
GC content: 62.88
Gene sequence:
>1110_bases ATGGACTTTGGCAGGATTTCACGACGGCATCTGTTGCAGGGTGGCGCGGCGCTGACGCTCGGCGCAGCCGCGGGCCTGCG GCCGGCCTTCGCGGCGGAGACGACGATCGGCTTCATCTATGTCGGCTCGCGCGACGACTACGGCTACAACCAGGCGCATG CGCAGGGCGCGGCGGCGCTGAAGAAGCTGCCCGGGCTGAAGGTGATCGAAGAGGAGAAGGTGCCGGAAACCGACGCAGTC GAGAAGACGATCGAGTCGATGATCAATCTCGACGGCGCCAGCCTGCTGTTCCCGACTTCATTCGGTTACTACAATCCGCA CATGATCAAGATGGCCAACAAGTACCCGAAGCTGCGCTTCGAGCACTGCGGCGGCCTGTGGAGCGAGAAGGATCCGAAGA ACGCCGGCTCCTATTTCGGCTACATCGACGAGGCGCAATATCTGTCCGGCATCGTTGCGGGCTACACCAGCAAGAGCGGC AAGCTCGGCTTCGTCGCCGCCAAGCCGATCCCGCAGGTACTGCGCAACATCAACGCCTTCACGCTCGGCGCGCAGCTCGC CAATCCCAAGGCGACCACGCAGGTGATCTTCACCGGCGACTGGTCGATGCCGGTCAAGGAAGCCGAGGCGACCAACAGCC TGATCGACCAGGGCGTCGACGTTCTCACCTGCCATGTCGACGGTCCGAAGACGATGGTCGAGAACGCGGCGCGCCGCGGC GCCTTCGTCACCGGCTATCACGTCAACCAGTCGCCGCTGGCGCCGAAGGCGTATCTCACCGGCGCCGAATGGAATTGGGA GGCGCTGTATCCGAAGTTCGTCAAGATGCTGGCCGCCGGCGAGAGCATTCCGAACTTCTATCGCGGCGGTCTCAAGGAAG AGCTGGTGAAGACGTCGCCTTATGGCGAGGCTGTCTCCGAGCAGGCGCGCAAGCATGCCGACGAGATCAAGGCCAAATTC CTCGGCGAGGGCTATACGATCTTCAAGGGCCCGATCAAGGACAACAAGGGCAACACCGTGATCACCGCAGGCACCGAGCG CGGTCAGAAGGATCCTGAGCTCGAGAAGATGGACTACCTGGTCGAGGGCGTGATCGGAGCGACGTCGTGA
Upstream 100 bases:
>100_bases CCTGGCACAAAGCTTGAAAAGCTCCTTCCTTGAGGCTCCGCCGTGCCGGTGTAGCCGAGATGACAGGGCGCGGGCCAGGG CTCGCCGAGGGAGCACACCA
Downstream 100 bases:
>100_bases CCACGGAGGCGGCCGATCCGGTTGATGCGGCCGCCATCGCGCCGGCCGCCGACGCAGGCTTTCTGCAGCGTTACGGCGCG AGCATTGAGTACATTCTCAT
Product: ABC transporter substrate-binding protein
Products: NA
Alternate protein names: Bmp Family Protein; Basic Membrane Protein; Lipoprotein; Bmp Family Membrane Protein; ABC Transporter Periplasmic/Surface Lipoprotein; Outer Membrane Lipoprotein; ABC Transporter; Membrane Lipoprotein; Basic Membrane Protein Family Protein; ABC Transporter Periplasmic Protein Surface Lipoprotein; Basic Membrane Lipoprotein Family; Lipoprotein Bmp Family; Twin-Arginine Translocation Pathway Signal; Lipoprotein Periplasmic Protein; Tat Pathway Signal Sequence/Basic Membrane Protein; Basic Membrane Lipoprotein Family Protein; Surface Lipoprotein; Basic Membrane Protein A-Like Protein; Signal Peptide Protein; ABC Transporter Periplasmic Protein; Med/BMP Family Lipoprotein
Number of amino acids: Translated: 369; Mature: 369
Protein sequence:
>369_residues MDFGRISRRHLLQGGAALTLGAAAGLRPAFAAETTIGFIYVGSRDDYGYNQAHAQGAAALKKLPGLKVIEEEKVPETDAV EKTIESMINLDGASLLFPTSFGYYNPHMIKMANKYPKLRFEHCGGLWSEKDPKNAGSYFGYIDEAQYLSGIVAGYTSKSG KLGFVAAKPIPQVLRNINAFTLGAQLANPKATTQVIFTGDWSMPVKEAEATNSLIDQGVDVLTCHVDGPKTMVENAARRG AFVTGYHVNQSPLAPKAYLTGAEWNWEALYPKFVKMLAAGESIPNFYRGGLKEELVKTSPYGEAVSEQARKHADEIKAKF LGEGYTIFKGPIKDNKGNTVITAGTERGQKDPELEKMDYLVEGVIGATS
Sequences:
>Translated_369_residues MDFGRISRRHLLQGGAALTLGAAAGLRPAFAAETTIGFIYVGSRDDYGYNQAHAQGAAALKKLPGLKVIEEEKVPETDAV EKTIESMINLDGASLLFPTSFGYYNPHMIKMANKYPKLRFEHCGGLWSEKDPKNAGSYFGYIDEAQYLSGIVAGYTSKSG KLGFVAAKPIPQVLRNINAFTLGAQLANPKATTQVIFTGDWSMPVKEAEATNSLIDQGVDVLTCHVDGPKTMVENAARRG AFVTGYHVNQSPLAPKAYLTGAEWNWEALYPKFVKMLAAGESIPNFYRGGLKEELVKTSPYGEAVSEQARKHADEIKAKF LGEGYTIFKGPIKDNKGNTVITAGTERGQKDPELEKMDYLVEGVIGATS >Mature_369_residues MDFGRISRRHLLQGGAALTLGAAAGLRPAFAAETTIGFIYVGSRDDYGYNQAHAQGAAALKKLPGLKVIEEEKVPETDAV EKTIESMINLDGASLLFPTSFGYYNPHMIKMANKYPKLRFEHCGGLWSEKDPKNAGSYFGYIDEAQYLSGIVAGYTSKSG KLGFVAAKPIPQVLRNINAFTLGAQLANPKATTQVIFTGDWSMPVKEAEATNSLIDQGVDVLTCHVDGPKTMVENAARRG AFVTGYHVNQSPLAPKAYLTGAEWNWEALYPKFVKMLAAGESIPNFYRGGLKEELVKTSPYGEAVSEQARKHADEIKAKF LGEGYTIFKGPIKDNKGNTVITAGTERGQKDPELEKMDYLVEGVIGATS
Specific function: Unknown
COG id: COG1744
COG function: function code R; Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40030; Mature: 40030
Theoretical pI: Translated: 7.67; Mature: 7.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFGRISRRHLLQGGAALTLGAAAGLRPAFAAETTIGFIYVGSRDDYGYNQAHAQGAAAL CCCHHHHHHHHHCCCCEEEECHHCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHH KKLPGLKVIEEEKVPETDAVEKTIESMINLDGASLLFPTSFGYYNPHMIKMANKYPKLRF HHCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEECCCCCCEEH EHCGGLWSEKDPKNAGSYFGYIDEAQYLSGIVAGYTSKSGKLGFVAAKPIPQVLRNINAF HHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHCCCEE TLGAQLANPKATTQVIFTGDWSMPVKEAEATNSLIDQGVDVLTCHVDGPKTMVENAARRG EECCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHCC AFVTGYHVNQSPLAPKAYLTGAEWNWEALYPKFVKMLAAGESIPNFYRGGLKEELVKTSP CEEEEEECCCCCCCCHHEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHCCC YGEAVSEQARKHADEIKAKFLGEGYTIFKGPIKDNKGNTVITAGTERGQKDPELEKMDYL CHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCHHHHHHH VEGVIGATS HHHHHCCCC >Mature Secondary Structure MDFGRISRRHLLQGGAALTLGAAAGLRPAFAAETTIGFIYVGSRDDYGYNQAHAQGAAAL CCCHHHHHHHHHCCCCEEEECHHCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHH KKLPGLKVIEEEKVPETDAVEKTIESMINLDGASLLFPTSFGYYNPHMIKMANKYPKLRF HHCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEECCCCCCEEH EHCGGLWSEKDPKNAGSYFGYIDEAQYLSGIVAGYTSKSGKLGFVAAKPIPQVLRNINAF HHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHCCCEE TLGAQLANPKATTQVIFTGDWSMPVKEAEATNSLIDQGVDVLTCHVDGPKTMVENAARRG EECCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHCC AFVTGYHVNQSPLAPKAYLTGAEWNWEALYPKFVKMLAAGESIPNFYRGGLKEELVKTSP CEEEEEECCCCCCCCHHEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHCCC YGEAVSEQARKHADEIKAKFLGEGYTIFKGPIKDNKGNTVITAGTERGQKDPELEKMDYL CHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCHHHHHHH VEGVIGATS HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA