Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146341160
Identifier: 146341160
GI number: 146341160
Start: 4434177
End: 4435448
Strand: Direct
Name: 146341160
Synonym: BRADO4232
Alternate gene names: NA
Gene position: 4434177-4435448 (Clockwise)
Preceding gene: 146341159
Following gene: 146341163
Centisome position: 59.47
GC content: 66.43
Gene sequence:
>1272_bases ATGGCGTACACGGCCGCGGCCGGAGAGTTTGCGTCGAGGCCGATCGCTCCTCCGGGCGTGATCGGCCTCCAGCGCGCGCT CGTCTGGCTGATCGGGGCCGCCGGCGCCATCGTGTTCATCGAACCGAGCCCGTACGAGCTCGTCACGCTCGCCTCCGCCG CGGTCTTCGTCGCGACCGGGATCAGGTTGCGCGCCGTATTTCTTTTTCTCCTTCTTCTCCTCTTCCTGATCAATCTCGGC TACACGGTCAGCGCCGTACCGCTGCTGGACGACTCCAAGATCGCAAGCTGGATCGCGACCTCCTGGTACATGGCGGTCAC GGCGCTGCTGCTGGCCATGGTCACGGCAGAAGATACCGCCGCGCGCCTCGATATGCTCCGGCGTGGCCTCGTCATGGGCG GCGCGATGGCCGGTCTTGCTGGCATTGCCGGCTACTTTCATCTCGTGCCCGGCGGCACCGACCTCCTTACGCTGTATGGC CGCGCACGCGGCACGTTCAAGGATCCGAACGTGCTCGGCGCGTTCCTGATCCTGCCGGCGCTGCTGGCGCTGCAGAACGT GGTCACTGCGCGCCTCGCCGCGACGATGCGGGCGAGCTTCGCGCTCGGCATCATGGCGCTCGCCATCCTGCTCGCGTTTT CGCGCGCGGCCTGGGGCGGCCTCGTGCTCACCGCCGCCTTCATGCTGGTGCTGATGGTGCTCACCAGCCAGACCCGGGGC GAGCGGTCGCGCATCATCGTCATGACGCTCGCCGCGGCGGTCGCGGGGGTCGTCCTGATCGGCATTCTGCTCTCCATCGA CTCCATCGCCGACATGTTCAAGCAGCGGGCGAGCTTCGACCAGAGCTACGACGAGGGCCGCTTCGGCCGCTTCGGCCGTC ACATCCTCGGCGCCGACATGGCGCTCGATCTGCCGTTCGGGATCGGACCGTTGCAGTTCCACAACTACTTTCCCGAGGAC ACACACAACTCCTATCTCAACGCCTTCATGTCCGGCGGCTGGCTGTCCGGCATCTGCTATCCCGCGCTCGTCTTCACCAC CGTCATTCTCGGCTTCCGCTACCTGTTCGCGCGCGTGCCGTGGCAGCGCACCTACATCGCCGTGTTCTCCGCGTTCCTCG GCACCGTCGGCGAGAGCTTCATCATCGACACCGACCATTGGCGCCACTTCTTCCTGATGCTCGGCACGATGTGGGGCATG ATCGCCGCCACCCGCGCACACCAGGCGGAGGCGAGCCGATCAGCATCGATCGGCTCGCACGCGGTCTCCTAA
Upstream 100 bases:
>100_bases TTACTGATGTCAGGGATCCGGAGCGAGCATCAGCCCGCTTCGTGCGTGTGATTGGCGGACCCCGCCAATCGTTGCGTATG AGTGTGAGTGTGAGTTCGTA
Downstream 100 bases:
>100_bases TCCTCCACCGTGAACGTCAGGCCGGCATTGTCGACCAGACGCTTGATCAGGCTGTCCTGCAGCGCGGCGCCCGGGGTCCA GAAGCCGCCCTTCACACTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 423; Mature: 422
Protein sequence:
>423_residues MAYTAAAGEFASRPIAPPGVIGLQRALVWLIGAAGAIVFIEPSPYELVTLASAAVFVATGIRLRAVFLFLLLLLFLINLG YTVSAVPLLDDSKIASWIATSWYMAVTALLLAMVTAEDTAARLDMLRRGLVMGGAMAGLAGIAGYFHLVPGGTDLLTLYG RARGTFKDPNVLGAFLILPALLALQNVVTARLAATMRASFALGIMALAILLAFSRAAWGGLVLTAAFMLVLMVLTSQTRG ERSRIIVMTLAAAVAGVVLIGILLSIDSIADMFKQRASFDQSYDEGRFGRFGRHILGADMALDLPFGIGPLQFHNYFPED THNSYLNAFMSGGWLSGICYPALVFTTVILGFRYLFARVPWQRTYIAVFSAFLGTVGESFIIDTDHWRHFFLMLGTMWGM IAATRAHQAEASRSASIGSHAVS
Sequences:
>Translated_423_residues MAYTAAAGEFASRPIAPPGVIGLQRALVWLIGAAGAIVFIEPSPYELVTLASAAVFVATGIRLRAVFLFLLLLLFLINLG YTVSAVPLLDDSKIASWIATSWYMAVTALLLAMVTAEDTAARLDMLRRGLVMGGAMAGLAGIAGYFHLVPGGTDLLTLYG RARGTFKDPNVLGAFLILPALLALQNVVTARLAATMRASFALGIMALAILLAFSRAAWGGLVLTAAFMLVLMVLTSQTRG ERSRIIVMTLAAAVAGVVLIGILLSIDSIADMFKQRASFDQSYDEGRFGRFGRHILGADMALDLPFGIGPLQFHNYFPED THNSYLNAFMSGGWLSGICYPALVFTTVILGFRYLFARVPWQRTYIAVFSAFLGTVGESFIIDTDHWRHFFLMLGTMWGM IAATRAHQAEASRSASIGSHAVS >Mature_422_residues AYTAAAGEFASRPIAPPGVIGLQRALVWLIGAAGAIVFIEPSPYELVTLASAAVFVATGIRLRAVFLFLLLLLFLINLGY TVSAVPLLDDSKIASWIATSWYMAVTALLLAMVTAEDTAARLDMLRRGLVMGGAMAGLAGIAGYFHLVPGGTDLLTLYGR ARGTFKDPNVLGAFLILPALLALQNVVTARLAATMRASFALGIMALAILLAFSRAAWGGLVLTAAFMLVLMVLTSQTRGE RSRIIVMTLAAAVAGVVLIGILLSIDSIADMFKQRASFDQSYDEGRFGRFGRHILGADMALDLPFGIGPLQFHNYFPEDT HNSYLNAFMSGGWLSGICYPALVFTTVILGFRYLFARVPWQRTYIAVFSAFLGTVGESFIIDTDHWRHFFLMLGTMWGMI AATRAHQAEASRSASIGSHAVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45463; Mature: 45332
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYTAAAGEFASRPIAPPGVIGLQRALVWLIGAAGAIVFIEPSPYELVTLASAAVFVATG CCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHH IRLRAVFLFLLLLLFLINLGYTVSAVPLLDDSKIASWIATSWYMAVTALLLAMVTAEDTA HHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARLDMLRRGLVMGGAMAGLAGIAGYFHLVPGGTDLLTLYGRARGTFKDPNVLGAFLILPA HHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHH LLALQNVVTARLAATMRASFALGIMALAILLAFSRAAWGGLVLTAAFMLVLMVLTSQTRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC ERSRIIVMTLAAAVAGVVLIGILLSIDSIADMFKQRASFDQSYDEGRFGRFGRHILGADM CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCC ALDLPFGIGPLQFHNYFPEDTHNSYLNAFMSGGWLSGICYPALVFTTVILGFRYLFARVP EEECCCCCCHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC WQRTYIAVFSAFLGTVGESFIIDTDHWRHFFLMLGTMWGMIAATRAHQAEASRSASIGSH CHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC AVS CCC >Mature Secondary Structure AYTAAAGEFASRPIAPPGVIGLQRALVWLIGAAGAIVFIEPSPYELVTLASAAVFVATG CCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHH IRLRAVFLFLLLLLFLINLGYTVSAVPLLDDSKIASWIATSWYMAVTALLLAMVTAEDTA HHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARLDMLRRGLVMGGAMAGLAGIAGYFHLVPGGTDLLTLYGRARGTFKDPNVLGAFLILPA HHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHH LLALQNVVTARLAATMRASFALGIMALAILLAFSRAAWGGLVLTAAFMLVLMVLTSQTRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC ERSRIIVMTLAAAVAGVVLIGILLSIDSIADMFKQRASFDQSYDEGRFGRFGRHILGADM CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCC ALDLPFGIGPLQFHNYFPEDTHNSYLNAFMSGGWLSGICYPALVFTTVILGFRYLFARVP EEECCCCCCHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC WQRTYIAVFSAFLGTVGESFIIDTDHWRHFFLMLGTMWGMIAATRAHQAEASRSASIGSH CHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC AVS CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA