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The map label for this gene is yjeF [C]

Identifier: 146341132

GI number: 146341132

Start: 4404408

End: 4405907

Strand: Reverse

Name: yjeF [C]

Synonym: BRADO4203

Alternate gene names: 146341132

Gene position: 4405907-4404408 (Counterclockwise)

Preceding gene: 146341135

Following gene: 146341129

Centisome position: 59.09

GC content: 70.4

Gene sequence:

>1500_bases
ATGGACGTGTTGACCACGAGTGAAATGGAGCGCGCCGACCGGCTGACGATCGCAGCCGGGACGCCGGGCTTCTCGTTGAT
GCTGAGTGCAGGCCAGGCGGTGGCCGCAGCCGCCATGGATCTGGTCGACGAGGGGCCGATCCTGGTCGTGTGCGGTCCCG
GCAACAACGGCGGCGATGGCTTCGTTGCGGCGGCCGAGCTCGCCGCGCAAGGCCGCGACGTCTCAGTCATCCTGATGTGC
GAGCGAGATGCGTTGCAGGGCGATGCGGCCTCCGCCGCCAGGGGCTGGAAGTTTCCGGTGCTGCCATTCACGCCGCAGGC
GATCGGCAAGCCGGCGCTGATCATCGATGCGTTGTTCGGTGCTGGTCTCAGCCGCCCGGTCACGGGCGAGCCCTCCGACG
TGATCGCCGCGATCAATGCCAATGGCGCGCCGGTGCTGGCCGTCGATCTGCCGAGCGGCATCAACGGCACCACCGGCGCG
GTGATGGGCATCGCGGTCCGCGCCACCGAGACCGTCACGTTCTTCCGCAAGAAGCCGGCGCATCTGTTGCTGCCGGGACG
CCAGCATTGCGGCCGAGTCCGGCTCGCCGACATCGGCATCGATCCGCATGTGCTCGAGGAGATTCGGCCGCTCGCTTTCG
AGAACGAGCCGGAGCTGTGGCAGCCGCGCTTTCCGGTGCCACGCATTGACGGCCACAAATATGCGCGCGGTCATGTGCTG
GCGATGTCGGGCGATGTCGCGGCGACAGGGGCCTCGCGCATGGCGGCGCGCGCCGCGCTGCGCGCCGGCGCCGGCCTGGT
GACGCTGGCTTCGCCGCGCGATGCACTCGCGGTCAACGCGGCCGCGCTGACGGCGGTGATGGTGCGGGCGGCCGACAGCG
CGATCGAGTTCGGCGAGCTGCTCGGCGACAAGCGCTACAACACTTGCATTATCGGCCCCGGCAGCGGCGTCGGCGAGCGT
ACCCGCGACCTCGTCTTCACGGGGCTTGGCGCGCAGCGTCATCTCGTCCTCGATGCCGATGCGCTGACCAGCTTCGCCGA
TGCGCCCGAGCGGCTGTTCGAGCAGATCCGGGCGACGGCCGACGCGCAGGTCGTGCTGACGCCGCACGAAGGCGAATTCC
CGCGGCTGTTTTCCGACCTCAGCAACAAGCATCCCGGCCGCTCCAAGCTGGAGCGCGTGCGCGCCGCCGCCGCGCGCTGC
GGTGCGGTGGTGCTGCTGAAAGGCGCCGACACCACCGTGGCCGCCCCTGACGGGCGCGCGGCGATCGCCGCCAACGCGCC
ACCCTGGCTCGCCACCGCCGGCGCCGGCGACGTGCTCGCCGGCATCATCGCAGGGCTGCTCGCGCAGGGCGTTCCGGCGT
TCGAGGCGGCCTGCATCGGCGTCTGGATGCATGGCGAGGCGGGATCGGAGGCGGGGCCCGGATTGATCGCGGAGGACCTG
ACGGAGACGCTGCCTGCGGTGTTCCGGCGGCTCTATGACAGGTTTGGGATCGAGTACTGA

Upstream 100 bases:

>100_bases
GGAATCGGCCCGCTCGCACGGGGCGCGGGGTTGCGGGGCGGGATCAGCCCAGAGATCGGGCCGCTGCTGGAGATCGCGGC
TGCAGGGGATACGAGCAGCA

Downstream 100 bases:

>100_bases
TGGATGAGGAGCGCTGCTGCTCAGCCACGACTGTCATGCCCGCGAAGGCGGGCATCCAGTACGCCGCGGCCCATCGATTC
AATCAAAGACGCCTCGGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 499; Mature: 499

Protein sequence:

>499_residues
MDVLTTSEMERADRLTIAAGTPGFSLMLSAGQAVAAAAMDLVDEGPILVVCGPGNNGGDGFVAAAELAAQGRDVSVILMC
ERDALQGDAASAARGWKFPVLPFTPQAIGKPALIIDALFGAGLSRPVTGEPSDVIAAINANGAPVLAVDLPSGINGTTGA
VMGIAVRATETVTFFRKKPAHLLLPGRQHCGRVRLADIGIDPHVLEEIRPLAFENEPELWQPRFPVPRIDGHKYARGHVL
AMSGDVAATGASRMAARAALRAGAGLVTLASPRDALAVNAAALTAVMVRAADSAIEFGELLGDKRYNTCIIGPGSGVGER
TRDLVFTGLGAQRHLVLDADALTSFADAPERLFEQIRATADAQVVLTPHEGEFPRLFSDLSNKHPGRSKLERVRAAAARC
GAVVLLKGADTTVAAPDGRAAIAANAPPWLATAGAGDVLAGIIAGLLAQGVPAFEAACIGVWMHGEAGSEAGPGLIAEDL
TETLPAVFRRLYDRFGIEY

Sequences:

>Translated_499_residues
MDVLTTSEMERADRLTIAAGTPGFSLMLSAGQAVAAAAMDLVDEGPILVVCGPGNNGGDGFVAAAELAAQGRDVSVILMC
ERDALQGDAASAARGWKFPVLPFTPQAIGKPALIIDALFGAGLSRPVTGEPSDVIAAINANGAPVLAVDLPSGINGTTGA
VMGIAVRATETVTFFRKKPAHLLLPGRQHCGRVRLADIGIDPHVLEEIRPLAFENEPELWQPRFPVPRIDGHKYARGHVL
AMSGDVAATGASRMAARAALRAGAGLVTLASPRDALAVNAAALTAVMVRAADSAIEFGELLGDKRYNTCIIGPGSGVGER
TRDLVFTGLGAQRHLVLDADALTSFADAPERLFEQIRATADAQVVLTPHEGEFPRLFSDLSNKHPGRSKLERVRAAAARC
GAVVLLKGADTTVAAPDGRAAIAANAPPWLATAGAGDVLAGIIAGLLAQGVPAFEAACIGVWMHGEAGSEAGPGLIAEDL
TETLPAVFRRLYDRFGIEY
>Mature_499_residues
MDVLTTSEMERADRLTIAAGTPGFSLMLSAGQAVAAAAMDLVDEGPILVVCGPGNNGGDGFVAAAELAAQGRDVSVILMC
ERDALQGDAASAARGWKFPVLPFTPQAIGKPALIIDALFGAGLSRPVTGEPSDVIAAINANGAPVLAVDLPSGINGTTGA
VMGIAVRATETVTFFRKKPAHLLLPGRQHCGRVRLADIGIDPHVLEEIRPLAFENEPELWQPRFPVPRIDGHKYARGHVL
AMSGDVAATGASRMAARAALRAGAGLVTLASPRDALAVNAAALTAVMVRAADSAIEFGELLGDKRYNTCIIGPGSGVGER
TRDLVFTGLGAQRHLVLDADALTSFADAPERLFEQIRATADAQVVLTPHEGEFPRLFSDLSNKHPGRSKLERVRAAAARC
GAVVLLKGADTTVAAPDGRAAIAANAPPWLATAGAGDVLAGIIAGLLAQGVPAFEAACIGVWMHGEAGSEAGPGLIAEDL
TETLPAVFRRLYDRFGIEY

Specific function: Unknown

COG id: COG0063

COG function: function code G; Predicted sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 YjeF N-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1790609, Length=514, Percent_Identity=33.2684824902724, Blast_Score=180, Evalue=2e-46,
Organism=Caenorhabditis elegans, GI17509719, Length=117, Percent_Identity=36.7521367521368, Blast_Score=69, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017953
- InterPro:   IPR000631
- InterPro:   IPR004443 [H]

Pfam domain/function: PF01256 Carb_kinase; PF03853 YjeF_N [H]

EC number: NA

Molecular weight: Translated: 51621; Mature: 51621

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: PS01050 UPF0031_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVLTTSEMERADRLTIAAGTPGFSLMLSAGQAVAAAAMDLVDEGPILVVCGPGNNGGDG
CCCCCCHHHHHCCEEEEEECCCCCEEEEECCHHHHHHHHHHHCCCCEEEEECCCCCCCCC
FVAAAELAAQGRDVSVILMCERDALQGDAASAARGWKFPVLPFTPQAIGKPALIIDALFG
HHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHCCCCCCCCCCCCHHHHCCCHHHHHHHHC
AGLSRPVTGEPSDVIAAINANGAPVLAVDLPSGINGTTGAVMGIAVRATETVTFFRKKPA
CCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCEEEEEEEEHHEEEEHHCCCC
HLLLPGRQHCGRVRLADIGIDPHVLEEIRPLAFENEPELWQPRFPVPRIDGHKYARGHVL
EEECCCHHHCCEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
AMSGDVAATGASRMAARAALRAGAGLVTLASPRDALAVNAAALTAVMVRAADSAIEFGEL
EECCCEECCCHHHHHHHHHHHCCCCEEEECCCCCHHEEHHHHHHHHHHHHHHHHHHHHHH
LGDKRYNTCIIGPGSGVGERTRDLVFTGLGAQRHLVLDADALTSFADAPERLFEQIRATA
HCCCCCCEEEEECCCCCCCHHHEEEEECCCCCEEEEEEHHHHHHHHCCHHHHHHHHHCCC
DAQVVLTPHEGEFPRLFSDLSNKHPGRSKLERVRAAAARCGAVVLLKGADTTVAAPDGRA
CCEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCCE
AIAANAPPWLATAGAGDVLAGIIAGLLAQGVPAFEAACIGVWMHGEAGSEAGPGLIAEDL
EEECCCCCCEEECCCHHHHHHHHHHHHHCCCCCHHEEEEEEEEECCCCCCCCCCCHHHHH
TETLPAVFRRLYDRFGIEY
HHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDVLTTSEMERADRLTIAAGTPGFSLMLSAGQAVAAAAMDLVDEGPILVVCGPGNNGGDG
CCCCCCHHHHHCCEEEEEECCCCCEEEEECCHHHHHHHHHHHCCCCEEEEECCCCCCCCC
FVAAAELAAQGRDVSVILMCERDALQGDAASAARGWKFPVLPFTPQAIGKPALIIDALFG
HHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHCCCCCCCCCCCCHHHHCCCHHHHHHHHC
AGLSRPVTGEPSDVIAAINANGAPVLAVDLPSGINGTTGAVMGIAVRATETVTFFRKKPA
CCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCEEEEEEEEHHEEEEHHCCCC
HLLLPGRQHCGRVRLADIGIDPHVLEEIRPLAFENEPELWQPRFPVPRIDGHKYARGHVL
EEECCCHHHCCEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
AMSGDVAATGASRMAARAALRAGAGLVTLASPRDALAVNAAALTAVMVRAADSAIEFGEL
EECCCEECCCHHHHHHHHHHHCCCCEEEECCCCCHHEEHHHHHHHHHHHHHHHHHHHHHH
LGDKRYNTCIIGPGSGVGERTRDLVFTGLGAQRHLVLDADALTSFADAPERLFEQIRATA
HCCCCCCEEEEECCCCCCCHHHEEEEECCCCCEEEEEEHHHHHHHHCCHHHHHHHHHCCC
DAQVVLTPHEGEFPRLFSDLSNKHPGRSKLERVRAAAARCGAVVLLKGADTTVAAPDGRA
CCEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCCE
AIAANAPPWLATAGAGDVLAGIIAGLLAQGVPAFEAACIGVWMHGEAGSEAGPGLIAEDL
EEECCCCCCEEECCCHHHHHHHHHHHHHCCCCCHHEEEEEEEEECCCCCCCCCCCHHHHH
TETLPAVFRRLYDRFGIEY
HHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]