Click here to switch to the map view.

The map label for this gene is nuoJ [H]

Identifier: 146341104

GI number: 146341104

Start: 4377549

End: 4378187

Strand: Reverse

Name: nuoJ [H]

Synonym: BRADO4175

Alternate gene names: 146341104

Gene position: 4378187-4377549 (Counterclockwise)

Preceding gene: 146341105

Following gene: 146341103

Centisome position: 58.72

GC content: 61.66

Gene sequence:

>639_bases
ATGATCCTTCCTGCGCTCTTCTTTTATCTCTTCGCGGCGGTCTGCGTGGCCTCCGCCGTGATGGTGATCGTCTCGAAGAA
CCCCGTTCACTCGGTGCTCTATCTGATCCTCGCCTTCGTCAACGCCTCCGGCCTGTTCGTGCTGATGGGCGCGGAGTTCC
TGGCGATGATCCTGATCGTCGTCTATGTCGGCGCGGTCGCGGTGTTGTTCCTGTTCGTGATCATGATGCTCGACGTGGAC
TTCACCGAGCTGCGCGAGGGCTTCCTGCAGTACATGCCGATCGGTCTCGTGATCGGCGGCATCTTCCTGTTCGAGCTGTT
GCTGACCGTGTCCTACTGGGTCATCAACCCGTCGACGCCGAAGGCGATCACGGCGGCGATCCCGACCAACGTCACCAACA
CCGAGGCGCTCGGCCTCGTGCTCTATACGAAGTACGTCCATTACTTCCAGCTGTCGGGCATGATCCTGCTGGTGGCGATG
ATCGGCGCGATCGTGCTGACCTTGCGCCACAAGGCGAGCGTCAAGCGCCAGGACATCAACGTCCAGAACGCGCGCACGCC
TGACATGGCGATGGCGGTTCGCAAGGTCGCGGTCGGGCAGGGCCTGCAGGACACGGATGCCGCGGAGTGGGTGAAATGA

Upstream 100 bases:

>100_bases
CTACTATGACAAGGCCAAGCTGCTCGCGAACGGCGACCGCTGGGAGCGCGAGATCTCCAAAGCCATCGCGCTCGACGCGC
CGTACCGCTGAGGCCGTCCG

Downstream 100 bases:

>100_bases
CCATCGGACTGGGACATTACCTCGCGGTCGCCGCGATGCTGTTCACGCTCGGCATCCTCGGCATCTTCCTGAACCGCAAG
AACATCATCGTCATCCTGAT

Product: NADH dehydrogenase subunit J

Products: NA

Alternate protein names: NADH dehydrogenase I subunit J; NDH-1 subunit J [H]

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MILPALFFYLFAAVCVASAVMVIVSKNPVHSVLYLILAFVNASGLFVLMGAEFLAMILIVVYVGAVAVLFLFVIMMLDVD
FTELREGFLQYMPIGLVIGGIFLFELLLTVSYWVINPSTPKAITAAIPTNVTNTEALGLVLYTKYVHYFQLSGMILLVAM
IGAIVLTLRHKASVKRQDINVQNARTPDMAMAVRKVAVGQGLQDTDAAEWVK

Sequences:

>Translated_212_residues
MILPALFFYLFAAVCVASAVMVIVSKNPVHSVLYLILAFVNASGLFVLMGAEFLAMILIVVYVGAVAVLFLFVIMMLDVD
FTELREGFLQYMPIGLVIGGIFLFELLLTVSYWVINPSTPKAITAAIPTNVTNTEALGLVLYTKYVHYFQLSGMILLVAM
IGAIVLTLRHKASVKRQDINVQNARTPDMAMAVRKVAVGQGLQDTDAAEWVK
>Mature_212_residues
MILPALFFYLFAAVCVASAVMVIVSKNPVHSVLYLILAFVNASGLFVLMGAEFLAMILIVVYVGAVAVLFLFVIMMLDVD
FTELREGFLQYMPIGLVIGGIFLFELLLTVSYWVINPSTPKAITAAIPTNVTNTEALGLVLYTKYVHYFQLSGMILLVAM
IGAIVLTLRHKASVKRQDINVQNARTPDMAMAVRKVAVGQGLQDTDAAEWVK

Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat

COG id: COG0839

COG function: function code C; NADH:ubiquinone oxidoreductase subunit 6 (chain J)

Gene ontology:

Cell location: Cellular chromatophore membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I subunit 6 family [H]

Homologues:

Organism=Escherichia coli, GI1788616, Length=180, Percent_Identity=31.6666666666667, Blast_Score=79, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001457 [H]

Pfam domain/function: PF00499 Oxidored_q3 [H]

EC number: =1.6.99.5 [H]

Molecular weight: Translated: 23223; Mature: 23223

Theoretical pI: Translated: 7.59; Mature: 7.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILPALFFYLFAAVCVASAVMVIVSKNPVHSVLYLILAFVNASGLFVLMGAEFLAMILIV
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHH
VYVGAVAVLFLFVIMMLDVDFTELREGFLQYMPIGLVIGGIFLFELLLTVSYWVINPSTP
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCC
KAITAAIPTNVTNTEALGLVLYTKYVHYFQLSGMILLVAMIGAIVLTLRHKASVKRQDIN
CCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
VQNARTPDMAMAVRKVAVGQGLQDTDAAEWVK
CCCCCCHHHHHHHHHHHHCCCCCCCCHHHCCC
>Mature Secondary Structure
MILPALFFYLFAAVCVASAVMVIVSKNPVHSVLYLILAFVNASGLFVLMGAEFLAMILIV
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHH
VYVGAVAVLFLFVIMMLDVDFTELREGFLQYMPIGLVIGGIFLFELLLTVSYWVINPSTP
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCC
KAITAAIPTNVTNTEALGLVLYTKYVHYFQLSGMILLVAMIGAIVLTLRHKASVKRQDIN
CCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
VQNARTPDMAMAVRKVAVGQGLQDTDAAEWVK
CCCCCCHHHHHHHHHHHHCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8566820 [H]