Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
---|---|
Accession | NC_009445 |
Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is lpxA [H]
Identifier: 146341058
GI number: 146341058
Start: 4324176
End: 4324988
Strand: Reverse
Name: lpxA [H]
Synonym: BRADO4129
Alternate gene names: 146341058
Gene position: 4324988-4324176 (Counterclockwise)
Preceding gene: 146341059
Following gene: 146341057
Centisome position: 58.0
GC content: 66.42
Gene sequence:
>813_bases ATGAGCAAGATTGATCCCACCGCCCGTGTCGAGGCCGGCGCCGTGATCGGCGAGGGCACCGTGATCGGTCCCTATTGCAT CATCGGCCCGAACGTCGTGATCGGCGCGAACTGCAAGCTGATCAGCCACGTCCAGATCATGGGTCACACCACGATCGGCG ACGACAATGTGATCTCGCCCTTCGTCGTGCTCGGCGGCGCCCCGCAGGACCTCAGTTATCGCGGCGAGCCGCACCGGCTC GAGATCGGCTCCGGCTGCACCTTCCGCGAGGGCGTGACGATGAACATCGGCACCACCAAGGGCGGCGGCCTGACCAAGGT CGGCAATGGCGGGTTCTTCATGAACAACGCCCACGTCGCCCATGATTGCGTCGTCGGCAACAACGTGATCTTCGCAACCT CGGCGACGCTTGGCGGCCATGTGGAGGTCGGCGATGCCGTCTACATCGGCGGGCTCTCCGCCGTGCATCAGTTCACCCGG ATCGGGCATGGCGTGATGGTCGGCGGCGTCTGCGGCGTGCGCGGTGACGTCATCCCCTATGGTCTCGTCAACGGCCAGTA CGCCGCGCTCGAAGGCCTCAACGTGATCGGAATGAAGCGCCGCAAGTTCACCCGCGAGCGGCTCGCGACCGTTCGCGCCT TCTATCAGAAGCTGTTCCACGGCCCCGGCGTGTTCGCCGATCGCCTCGCGGCCGTGCGCCCGATGGCCGGTGACGATCCG GCCATCGACGAAATCCTCGCCTTTATCGAAGGCGGCCGCCACCGCGCGCTGTGTCTGCCGGAGATCGGCAGATCGGCGCC CGCCGAGGCCTGA
Upstream 100 bases:
>100_bases TCCACGGCGATGCTAAGGTCGACGGCGTGGTCGTCGCCGAGGCCGATGTCGGCGCGATGCTGACCGACTGACGTGCTGAA AAAGAGTTGGTTGCGTTGAG
Downstream 100 bases:
>100_bases TCGTCATGGGTGGGCCGGACAGCGAGACCACGGCGCCTGTCGGCCTGATTGCCGCCGGCGGCGTGCTGCCGTTCGCGGTC GCTGACGCCATCGTTGCGCG
Product: UDP-N-acetylglucosamine acyltransferase
Products: NA
Alternate protein names: UDP-N-acetylglucosamine acyltransferase [H]
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MSKIDPTARVEAGAVIGEGTVIGPYCIIGPNVVIGANCKLISHVQIMGHTTIGDDNVISPFVVLGGAPQDLSYRGEPHRL EIGSGCTFREGVTMNIGTTKGGGLTKVGNGGFFMNNAHVAHDCVVGNNVIFATSATLGGHVEVGDAVYIGGLSAVHQFTR IGHGVMVGGVCGVRGDVIPYGLVNGQYAALEGLNVIGMKRRKFTRERLATVRAFYQKLFHGPGVFADRLAAVRPMAGDDP AIDEILAFIEGGRHRALCLPEIGRSAPAEA
Sequences:
>Translated_270_residues MSKIDPTARVEAGAVIGEGTVIGPYCIIGPNVVIGANCKLISHVQIMGHTTIGDDNVISPFVVLGGAPQDLSYRGEPHRL EIGSGCTFREGVTMNIGTTKGGGLTKVGNGGFFMNNAHVAHDCVVGNNVIFATSATLGGHVEVGDAVYIGGLSAVHQFTR IGHGVMVGGVCGVRGDVIPYGLVNGQYAALEGLNVIGMKRRKFTRERLATVRAFYQKLFHGPGVFADRLAAVRPMAGDDP AIDEILAFIEGGRHRALCLPEIGRSAPAEA >Mature_269_residues SKIDPTARVEAGAVIGEGTVIGPYCIIGPNVVIGANCKLISHVQIMGHTTIGDDNVISPFVVLGGAPQDLSYRGEPHRLE IGSGCTFREGVTMNIGTTKGGGLTKVGNGGFFMNNAHVAHDCVVGNNVIFATSATLGGHVEVGDAVYIGGLSAVHQFTRI GHGVMVGGVCGVRGDVIPYGLVNGQYAALEGLNVIGMKRRKFTRERLATVRAFYQKLFHGPGVFADRLAAVRPMAGDDPA IDEILAFIEGGRHRALCLPEIGRSAPAEA
Specific function: Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell [H]
COG id: COG1043
COG function: function code M; Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family. LpxA subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786378, Length=245, Percent_Identity=47.3469387755102, Blast_Score=214, Evalue=4e-57,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010137 - InterPro: IPR011004 [H]
Pfam domain/function: NA
EC number: =2.3.1.129 [H]
Molecular weight: Translated: 28202; Mature: 28071
Theoretical pI: Translated: 7.59; Mature: 7.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKIDPTARVEAGAVIGEGTVIGPYCIIGPNVVIGANCKLISHVQIMGHTTIGDDNVISP CCCCCCCCEEECCEEEECCEEECCEEEECCCEEEECCCEEEEEEEEEEEEECCCCCCCCC FVVLGGAPQDLSYRGEPHRLEIGSGCTFREGVTMNIGTTKGGGLTKVGNGGFFMNNAHVA EEEECCCCCCCCCCCCCCEEEECCCCEECCCEEEEECCCCCCCEEEECCCCEEECCCCEE HDCVVGNNVIFATSATLGGHVEVGDAVYIGGLSAVHQFTRIGHGVMVGGVCGVRGDVIPY EEEEECCCEEEEEECCCCCEEEECCEEEECCHHHHHHHHHHCCCEEECCEECCCCCCCEE GLVNGQYAALEGLNVIGMKRRKFTRERLATVRAFYQKLFHGPGVFADRLAAVRPMAGDDP EECCCCEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCH AIDEILAFIEGGRHRALCLPEIGRSAPAEA HHHHHHHHHHCCCEEEEECHHCCCCCCCCC >Mature Secondary Structure SKIDPTARVEAGAVIGEGTVIGPYCIIGPNVVIGANCKLISHVQIMGHTTIGDDNVISP CCCCCCCEEECCEEEECCEEECCEEEECCCEEEECCCEEEEEEEEEEEEECCCCCCCCC FVVLGGAPQDLSYRGEPHRLEIGSGCTFREGVTMNIGTTKGGGLTKVGNGGFFMNNAHVA EEEECCCCCCCCCCCCCCEEEECCCCEECCCEEEEECCCCCCCEEEECCCCEEECCCCEE HDCVVGNNVIFATSATLGGHVEVGDAVYIGGLSAVHQFTRIGHGVMVGGVCGVRGDVIPY EEEEECCCEEEEEECCCCCEEEECCEEEECCHHHHHHHHHHCCCEEECCEECCCCCCCEE GLVNGQYAALEGLNVIGMKRRKFTRERLATVRAFYQKLFHGPGVFADRLAAVRPMAGDDP EECCCCEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCH AIDEILAFIEGGRHRALCLPEIGRSAPAEA HHHHHHHHHHCCCEEEEECHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA