Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is pyrG [H]
Identifier: 146341032
GI number: 146341032
Start: 4292696
End: 4294327
Strand: Reverse
Name: pyrG [H]
Synonym: BRADO4103
Alternate gene names: 146341032
Gene position: 4294327-4292696 (Counterclockwise)
Preceding gene: 146341033
Following gene: 146341031
Centisome position: 57.59
GC content: 65.38
Gene sequence:
>1632_bases ATGGCGCGGTACATCTTCATCACCGGCGGCGTGGTTTCCTCGCTCGGAAAGGGTCTGGCTTCAGCCGCGTTAGGCGCGCT GCTGCAGGCCCGCGGCTACAAGGTCCGGCTTCGCAAGCTCGACCCCTATCTCAACCTCGATCCAGGCACGATGTCGCCGT ATCAGCACGGCGAAGTGTTCGTGACCGATGACGGCGCGGAGACCGATCTCGATCTCGGCCATTACGAACGCTTCACCGGG CGGCCCGCGACCAAGGCCGACAACATCACCACGGGGCGCATCTACCAGGACATCCTGACCAAGGAGCGCCGCGGCGATTA TCTCGGAGCGACCATCCAGGTCGTCCCGCATGTGACCAATGCGATCAAGGATTTCGTGCTGTCGGGCAATGACGAGTACG ACTTCGTGCTGGTCGAGATCGGCGGCACCGTCGGCGACATCGAGGGCCTGCCGTTCTTCGAGGCGATCCGCCAACTCGGC AACGAGCTGCCGCGCCACCACGCGATCTACATTCATCTCACGCTGCTGCCGTACATCCCGAGCGCCGGCGAATTGAAGAC CAAGCCGACACAGCATTCGGTCAAGGAGCTGCGCTCGATCGGCATCCAGCCGGACATCCTGCTGTGCCGCACCGATCGCG AGATCCCGAAGGAGGAGCGGCGCAAGCTCGGCCTGTTCTGCAACGTGCGCGAGAGCGCCGTGATCGAGGCGCGCGACGTC GACAACATCTACGCCGTGCCGGAGGCCTATCACGCCGCCGGCCTCGACGACGAGGTGCTGGCCGCGTTCGGGATCGAGCC GCGGATTCCGCCGGCGCTTGCGAGCTGGCACACGATCAACGAGCGCGTCCGTAATCCGGAAGGCGACGTGACGATCGCGA TCGTCGGCAAGTACACGGGCATGAAGGATGCCTACAAGTCGCTGATCGAAGCGCTGTCCCATGGCGGCATCGCCAACAAG GTCCGCGTCAAGCTCGACTGGATCGAGAGCGAGGTGTTCGAGAACGAGGACCCCGCGCCGTTCCTGGAGCACGTCAACGG CATCCTGGTGCCCGGCGGCTTCGGCCAGCGCGGCGCGGAAGGCAAGATCCGCGCGGCGCAGTTCGCCAGGGAGCGCGACG TGCCGTATTTCGGCATCTGTTTCGGCATGCAGATGGCGGTGATCGAAGCAGCGCGCAATCTCGTCGGAATCACCGAGGCA AACTCGACCGAGTTCGGCCCGACCAAGGAGCCGCTGGTCGGTCTGATGACCGAGTGGCTGCGCGGCAACGAACTGGAGAA GCGCTCGCAGAGCGGCGATCTCGGCGGCACGATGCGGCTCGGCGCCTATCCCGCGACGCTCAAGCGCGGCAGCCGCGTGT CCGAGGTCTATGGCGGCGCCACCGAGATCTCGGAGCGGCACCGCCATCGCTACGAGGTCAACACCGCCTACAAGGACCGG CTCGAGCAGCATGGCTTGAAGTTCTCCGGCCTGTCGCCCGACGGCGTGCTGCCGGAGATCGTGGAGTACGAGGACCATCC CTGGTTCATCGGCGTCCAGTTCCACCCCGAGCTGAAGTCGCGCCCGTTCGAGCCGCACCCGCTGTTCGCATCGTTCATCC AGGCGGCGATGGTGCAGAGCCGGCTGGTGTGA
Upstream 100 bases:
>100_bases CATTCATGTTTTGACGTAACCCACAGGCCCCCGACATCGTTGCGGGCTGGTCACGATTCGTTTTGGCGAATCGAGCGCGC GGCATTAAAGGTAGGGTCCC
Downstream 100 bases:
>100_bases TCGGTTGCTGCCCCCGGGCAAGCCGTCATTGCGAGCGAAGCGAAGCAATCCAGAGTGCTTGCGCAGCCCTGGATTGCTTC GTCGCTGACGCTCCTCGCAA
Product: CTP synthetase
Products: NA
Alternate protein names: CTP synthetase; UTP--ammonia ligase [H]
Number of amino acids: Translated: 543; Mature: 542
Protein sequence:
>543_residues MARYIFITGGVVSSLGKGLASAALGALLQARGYKVRLRKLDPYLNLDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFTG RPATKADNITTGRIYQDILTKERRGDYLGATIQVVPHVTNAIKDFVLSGNDEYDFVLVEIGGTVGDIEGLPFFEAIRQLG NELPRHHAIYIHLTLLPYIPSAGELKTKPTQHSVKELRSIGIQPDILLCRTDREIPKEERRKLGLFCNVRESAVIEARDV DNIYAVPEAYHAAGLDDEVLAAFGIEPRIPPALASWHTINERVRNPEGDVTIAIVGKYTGMKDAYKSLIEALSHGGIANK VRVKLDWIESEVFENEDPAPFLEHVNGILVPGGFGQRGAEGKIRAAQFARERDVPYFGICFGMQMAVIEAARNLVGITEA NSTEFGPTKEPLVGLMTEWLRGNELEKRSQSGDLGGTMRLGAYPATLKRGSRVSEVYGGATEISERHRHRYEVNTAYKDR LEQHGLKFSGLSPDGVLPEIVEYEDHPWFIGVQFHPELKSRPFEPHPLFASFIQAAMVQSRLV
Sequences:
>Translated_543_residues MARYIFITGGVVSSLGKGLASAALGALLQARGYKVRLRKLDPYLNLDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFTG RPATKADNITTGRIYQDILTKERRGDYLGATIQVVPHVTNAIKDFVLSGNDEYDFVLVEIGGTVGDIEGLPFFEAIRQLG NELPRHHAIYIHLTLLPYIPSAGELKTKPTQHSVKELRSIGIQPDILLCRTDREIPKEERRKLGLFCNVRESAVIEARDV DNIYAVPEAYHAAGLDDEVLAAFGIEPRIPPALASWHTINERVRNPEGDVTIAIVGKYTGMKDAYKSLIEALSHGGIANK VRVKLDWIESEVFENEDPAPFLEHVNGILVPGGFGQRGAEGKIRAAQFARERDVPYFGICFGMQMAVIEAARNLVGITEA NSTEFGPTKEPLVGLMTEWLRGNELEKRSQSGDLGGTMRLGAYPATLKRGSRVSEVYGGATEISERHRHRYEVNTAYKDR LEQHGLKFSGLSPDGVLPEIVEYEDHPWFIGVQFHPELKSRPFEPHPLFASFIQAAMVQSRLV >Mature_542_residues ARYIFITGGVVSSLGKGLASAALGALLQARGYKVRLRKLDPYLNLDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFTGR PATKADNITTGRIYQDILTKERRGDYLGATIQVVPHVTNAIKDFVLSGNDEYDFVLVEIGGTVGDIEGLPFFEAIRQLGN ELPRHHAIYIHLTLLPYIPSAGELKTKPTQHSVKELRSIGIQPDILLCRTDREIPKEERRKLGLFCNVRESAVIEARDVD NIYAVPEAYHAAGLDDEVLAAFGIEPRIPPALASWHTINERVRNPEGDVTIAIVGKYTGMKDAYKSLIEALSHGGIANKV RVKLDWIESEVFENEDPAPFLEHVNGILVPGGFGQRGAEGKIRAAQFARERDVPYFGICFGMQMAVIEAARNLVGITEAN STEFGPTKEPLVGLMTEWLRGNELEKRSQSGDLGGTMRLGAYPATLKRGSRVSEVYGGATEISERHRHRYEVNTAYKDRL EQHGLKFSGLSPDGVLPEIVEYEDHPWFIGVQFHPELKSRPFEPHPLFASFIQAAMVQSRLV
Specific function: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen [H]
COG id: COG0504
COG function: function code F; CTP synthase (UTP-ammonia lyase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Homo sapiens, GI148491070, Length=557, Percent_Identity=43.8061041292639, Blast_Score=466, Evalue=1e-131, Organism=Homo sapiens, GI28559085, Length=560, Percent_Identity=42.8571428571429, Blast_Score=460, Evalue=1e-129, Organism=Homo sapiens, GI28559083, Length=560, Percent_Identity=42.8571428571429, Blast_Score=460, Evalue=1e-129, Organism=Homo sapiens, GI221316689, Length=560, Percent_Identity=42.8571428571429, Blast_Score=460, Evalue=1e-129, Organism=Escherichia coli, GI1789142, Length=536, Percent_Identity=57.4626865671642, Blast_Score=604, Evalue=1e-174, Organism=Caenorhabditis elegans, GI25148299, Length=612, Percent_Identity=36.7647058823529, Blast_Score=400, Evalue=1e-112, Organism=Saccharomyces cerevisiae, GI6322563, Length=570, Percent_Identity=40.3508771929825, Blast_Score=431, Evalue=1e-121, Organism=Saccharomyces cerevisiae, GI6319432, Length=567, Percent_Identity=40.3880070546737, Blast_Score=428, Evalue=1e-120, Organism=Drosophila melanogaster, GI24664469, Length=558, Percent_Identity=43.5483870967742, Blast_Score=460, Evalue=1e-129, Organism=Drosophila melanogaster, GI21357815, Length=504, Percent_Identity=42.6587301587302, Blast_Score=395, Evalue=1e-110,
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004468 - InterPro: IPR017456 - InterPro: IPR017926 - InterPro: IPR000991 [H]
Pfam domain/function: PF06418 CTP_synth_N; PF00117 GATase [H]
EC number: =6.3.4.2 [H]
Molecular weight: Translated: 60228; Mature: 60097
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARYIFITGGVVSSLGKGLASAALGALLQARGYKVRLRKLDPYLNLDPGTMSPYQHGEVF CCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEECCCCCCCCCCCCEEE VTDDGAETDLDLGHYERFTGRPATKADNITTGRIYQDILTKERRGDYLGATIQVVPHVTN EECCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEHHHHHH AIKDFVLSGNDEYDFVLVEIGGTVGDIEGLPFFEAIRQLGNELPRHHAIYIHLTLLPYIP HHHHHHHCCCCCCCEEEEEECCCEECCCCCCHHHHHHHHHHHCCCCEEEEEEEEEECCCC SAGELKTKPTQHSVKELRSIGIQPDILLCRTDREIPKEERRKLGLFCNVRESAVIEARDV CCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHCCEEEECCCCCEEEECCC DNIYAVPEAYHAAGLDDEVLAAFGIEPRIPPALASWHTINERVRNPEGDVTIAIVGKYTG CCEEECCCHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCC MKDAYKSLIEALSHGGIANKVRVKLDWIESEVFENEDPAPFLEHVNGILVPGGFGQRGAE HHHHHHHHHHHHHCCCCCCEEEEEEEEHHHHHHCCCCCCHHHHHCCCEEECCCCCCCCCC GKIRAAQFARERDVPYFGICFGMQMAVIEAARNLVGITEANSTEFGPTKEPLVGLMTEWL CCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHH RGNELEKRSQSGDLGGTMRLGAYPATLKRGSRVSEVYGGATEISERHRHRYEVNTAYKDR CCCHHHHHHCCCCCCCEEEECCCHHHHHCCCHHHHHHCCHHHHHHHHHHHEECCHHHHHH LEQHGLKFSGLSPDGVLPEIVEYEDHPWFIGVQFHPELKSRPFEPHPLFASFIQAAMVQS HHHCCCEECCCCCCCCCCHHHCCCCCCEEEEEEECCHHHCCCCCCCHHHHHHHHHHHHHH RLV HCC >Mature Secondary Structure ARYIFITGGVVSSLGKGLASAALGALLQARGYKVRLRKLDPYLNLDPGTMSPYQHGEVF CEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEECCCCCCCCCCCCEEE VTDDGAETDLDLGHYERFTGRPATKADNITTGRIYQDILTKERRGDYLGATIQVVPHVTN EECCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEHHHHHH AIKDFVLSGNDEYDFVLVEIGGTVGDIEGLPFFEAIRQLGNELPRHHAIYIHLTLLPYIP HHHHHHHCCCCCCCEEEEEECCCEECCCCCCHHHHHHHHHHHCCCCEEEEEEEEEECCCC SAGELKTKPTQHSVKELRSIGIQPDILLCRTDREIPKEERRKLGLFCNVRESAVIEARDV CCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHCCEEEECCCCCEEEECCC DNIYAVPEAYHAAGLDDEVLAAFGIEPRIPPALASWHTINERVRNPEGDVTIAIVGKYTG CCEEECCCHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCC MKDAYKSLIEALSHGGIANKVRVKLDWIESEVFENEDPAPFLEHVNGILVPGGFGQRGAE HHHHHHHHHHHHHCCCCCCEEEEEEEEHHHHHHCCCCCCHHHHHCCCEEECCCCCCCCCC GKIRAAQFARERDVPYFGICFGMQMAVIEAARNLVGITEANSTEFGPTKEPLVGLMTEWL CCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHH RGNELEKRSQSGDLGGTMRLGAYPATLKRGSRVSEVYGGATEISERHRHRYEVNTAYKDR CCCHHHHHHCCCCCCCEEEECCCHHHHHCCCHHHHHHCCHHHHHHHHHHHEECCHHHHHH LEQHGLKFSGLSPDGVLPEIVEYEDHPWFIGVQFHPELKSRPFEPHPLFASFIQAAMVQS HHHCCCEECCCCCCCCCCHHHCCCCCCEEEEEEECCHHHCCCCCCCHHHHHHHHHHHHHH RLV HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12597275 [H]