| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is livG [H]
Identifier: 146341002
GI number: 146341002
Start: 4261505
End: 4262233
Strand: Reverse
Name: livG [H]
Synonym: BRADO4073
Alternate gene names: 146341002
Gene position: 4262233-4261505 (Counterclockwise)
Preceding gene: 146341003
Following gene: 146341001
Centisome position: 57.16
GC content: 66.39
Gene sequence:
>729_bases ATGGCGGACCTCGTTCCTCTGCTCAAGGCCGAGCACCTGACGATGCGTTTCGGCGGCGTGGTCGCCAACGACGACATCAC CTTCACCCTCCAGGAGATGGAGCTGCGCTGCCTGATCGGCCCCAACGGCGCCGGCAAGAGCACCTTCTTCAAGACGCTCA CCGGCCAGCTCGTACCGACCTCCGGCACCATCTCCTTCCGCGGCATGCCGATCGCGGGGAAGGCGTCGCACGAGATCGCG CGCATGGGCATCGGCATCAAGACCCAGGTCCCGAACGTCTTCAACGGCCTTTCGGTGCGCGAGAACATCTGGCTCGCCGT GCGCCGCAAGGCGACGCCGCGCCAGCAGGGCCCGGCCGTCGACGCCGTGCTGGAGATGATCCGGTTGACTGACTACGCCG ACAGCATCGTCGCGACGCTCTCGCACGGCCAGCGGCAATGGGTCGAGATCGGCATGGTGCTCGCCGCCGAGCCGGAGCTA ATCCTGCTCGACGAGCCCGCCGCGGGAATGACCGACGAGGAGACGTTCCATACGGCCGCGATCATCCGCGAGATCAACCA GACCCGCGCCATCGTCGTCGTCGAGCACGACATGGAGTTCATCAAGCAGATCGCCAAGCGCGTGACCGTGTTCCACCAGG GCCGCGTGCTGGTCGAGGACACCGTCGACAAGGTGCTCGCCGACCAGCGCGTGCGCGACGTCTATCTCGGCAAGAAGGTG GCGGCATGA
Upstream 100 bases:
>100_bases GCGCGTGATCTCGTGATGCGGCTGATCCCGGACAGGAAGAAGACCAACGACCAGCCGGTGCAGTCAGCGGCGGCGCCGCA TCCCGCAGGAGCCGAATGAC
Downstream 100 bases:
>100_bases GCACGCTTCTCGAGGTCAAGGGGCTCAAATCCGGCTATGGCCGGATCCCGATCCTGTTCGGCGTCGATCTCACCGTCGGC GATGGCGAGTATCTCGGCAT
Product: putative branched-chain amino acid ABC transporter ATP-binding protein
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: LIV-I protein G [H]
Number of amino acids: Translated: 242; Mature: 241
Protein sequence:
>242_residues MADLVPLLKAEHLTMRFGGVVANDDITFTLQEMELRCLIGPNGAGKSTFFKTLTGQLVPTSGTISFRGMPIAGKASHEIA RMGIGIKTQVPNVFNGLSVRENIWLAVRRKATPRQQGPAVDAVLEMIRLTDYADSIVATLSHGQRQWVEIGMVLAAEPEL ILLDEPAAGMTDEETFHTAAIIREINQTRAIVVVEHDMEFIKQIAKRVTVFHQGRVLVEDTVDKVLADQRVRDVYLGKKV AA
Sequences:
>Translated_242_residues MADLVPLLKAEHLTMRFGGVVANDDITFTLQEMELRCLIGPNGAGKSTFFKTLTGQLVPTSGTISFRGMPIAGKASHEIA RMGIGIKTQVPNVFNGLSVRENIWLAVRRKATPRQQGPAVDAVLEMIRLTDYADSIVATLSHGQRQWVEIGMVLAAEPEL ILLDEPAAGMTDEETFHTAAIIREINQTRAIVVVEHDMEFIKQIAKRVTVFHQGRVLVEDTVDKVLADQRVRDVYLGKKV AA >Mature_241_residues ADLVPLLKAEHLTMRFGGVVANDDITFTLQEMELRCLIGPNGAGKSTFFKTLTGQLVPTSGTISFRGMPIAGKASHEIAR MGIGIKTQVPNVFNGLSVRENIWLAVRRKATPRQQGPAVDAVLEMIRLTDYADSIVATLSHGQRQWVEIGMVLAAEPELI LLDEPAAGMTDEETFHTAAIIREINQTRAIVVVEHDMEFIKQIAKRVTVFHQGRVLVEDTVDKVLADQRVRDVYLGKKVA A
Specific function: Component of the leucine-specific transport system [H]
COG id: COG4674
COG function: function code R; Uncharacterized ABC-type transport system, ATPase component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI116734710, Length=219, Percent_Identity=30.5936073059361, Blast_Score=89, Evalue=3e-18, Organism=Homo sapiens, GI27881501, Length=199, Percent_Identity=27.1356783919598, Blast_Score=88, Evalue=7e-18, Organism=Homo sapiens, GI30795238, Length=199, Percent_Identity=27.1356783919598, Blast_Score=88, Evalue=7e-18, Organism=Homo sapiens, GI45446740, Length=237, Percent_Identity=27.8481012658228, Blast_Score=88, Evalue=8e-18, Organism=Homo sapiens, GI47078218, Length=237, Percent_Identity=27.8481012658228, Blast_Score=88, Evalue=8e-18, Organism=Homo sapiens, GI31657092, Length=210, Percent_Identity=29.5238095238095, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI153792144, Length=200, Percent_Identity=27.5, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI105990541, Length=212, Percent_Identity=29.7169811320755, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI27436953, Length=200, Percent_Identity=25.5, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI150417984, Length=180, Percent_Identity=27.2222222222222, Blast_Score=79, Evalue=3e-15, Organism=Homo sapiens, GI21536376, Length=208, Percent_Identity=26.9230769230769, Blast_Score=79, Evalue=5e-15, Organism=Homo sapiens, GI6005701, Length=199, Percent_Identity=27.6381909547739, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI27262624, Length=196, Percent_Identity=29.0816326530612, Blast_Score=76, Evalue=2e-14, Organism=Homo sapiens, GI27262626, Length=196, Percent_Identity=29.0816326530612, Blast_Score=76, Evalue=2e-14, Organism=Homo sapiens, GI27477115, Length=192, Percent_Identity=26.0416666666667, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI108773784, Length=182, Percent_Identity=27.4725274725275, Blast_Score=68, Evalue=6e-12, Organism=Homo sapiens, GI108773782, Length=182, Percent_Identity=27.4725274725275, Blast_Score=68, Evalue=6e-12, Organism=Homo sapiens, GI9665248, Length=187, Percent_Identity=26.2032085561497, Blast_Score=64, Evalue=8e-11, Organism=Escherichia coli, GI1789864, Length=251, Percent_Identity=35.0597609561753, Blast_Score=144, Evalue=4e-36, Organism=Escherichia coli, GI1789593, Length=234, Percent_Identity=30.7692307692308, Blast_Score=110, Evalue=1e-25, Organism=Escherichia coli, GI1788897, Length=224, Percent_Identity=33.9285714285714, Blast_Score=108, Evalue=3e-25, Organism=Escherichia coli, GI1790190, Length=243, Percent_Identity=32.9218106995885, Blast_Score=107, Evalue=8e-25, Organism=Escherichia coli, GI87082268, Length=239, Percent_Identity=31.3807531380753, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1788472, Length=236, Percent_Identity=31.3559322033898, Blast_Score=100, Evalue=8e-23, Organism=Escherichia coli, GI1790525, Length=239, Percent_Identity=31.3807531380753, Blast_Score=99, Evalue=2e-22, Organism=Escherichia coli, GI1786803, Length=246, Percent_Identity=28.0487804878049, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI1787792, Length=225, Percent_Identity=30.2222222222222, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI48994943, Length=217, Percent_Identity=30.8755760368664, Blast_Score=96, Evalue=1e-21, Organism=Escherichia coli, GI1787089, Length=210, Percent_Identity=32.8571428571429, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI1788210, Length=226, Percent_Identity=30.5309734513274, Blast_Score=95, Evalue=3e-21, Organism=Escherichia coli, GI1788761, Length=227, Percent_Identity=29.5154185022026, Blast_Score=94, Evalue=7e-21, Organism=Escherichia coli, GI1790739, Length=235, Percent_Identity=27.6595744680851, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI87081791, Length=217, Percent_Identity=28.5714285714286, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI87081782, Length=226, Percent_Identity=28.7610619469027, Blast_Score=92, Evalue=2e-20, Organism=Escherichia coli, GI1789991, Length=222, Percent_Identity=32.4324324324324, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI1786398, Length=213, Percent_Identity=27.6995305164319, Blast_Score=88, Evalue=5e-19, Organism=Escherichia coli, GI87081834, Length=223, Percent_Identity=27.8026905829596, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1788225, Length=231, Percent_Identity=29.4372294372294, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1786872, Length=209, Percent_Identity=30.622009569378, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI48995001, Length=220, Percent_Identity=27.7272727272727, Blast_Score=85, Evalue=5e-18, Organism=Escherichia coli, GI1790467, Length=214, Percent_Identity=29.4392523364486, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1786698, Length=219, Percent_Identity=29.6803652968037, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI87081709, Length=214, Percent_Identity=26.1682242990654, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1786253, Length=231, Percent_Identity=27.2727272727273, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI1790544, Length=248, Percent_Identity=27.4193548387097, Blast_Score=78, Evalue=5e-16, Organism=Escherichia coli, GI1786345, Length=234, Percent_Identity=23.9316239316239, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1787029, Length=224, Percent_Identity=25.4464285714286, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1786563, Length=216, Percent_Identity=26.8518518518519, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1789891, Length=216, Percent_Identity=28.2407407407407, Blast_Score=75, Evalue=3e-15, Organism=Escherichia coli, GI48994997, Length=239, Percent_Identity=27.1966527196653, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1789672, Length=228, Percent_Identity=27.1929824561404, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI1787712, Length=229, Percent_Identity=26.2008733624454, Blast_Score=73, Evalue=1e-14, Organism=Escherichia coli, GI1789873, Length=215, Percent_Identity=27.4418604651163, Blast_Score=73, Evalue=1e-14, Organism=Escherichia coli, GI1788450, Length=218, Percent_Identity=27.0642201834862, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1789032, Length=245, Percent_Identity=25.7142857142857, Blast_Score=72, Evalue=2e-14, Organism=Escherichia coli, GI1787041, Length=211, Percent_Identity=27.4881516587678, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1789962, Length=222, Percent_Identity=23.8738738738739, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1788506, Length=217, Percent_Identity=27.1889400921659, Blast_Score=68, Evalue=5e-13, Organism=Escherichia coli, GI1790162, Length=247, Percent_Identity=25.9109311740891, Blast_Score=68, Evalue=7e-13, Organism=Escherichia coli, GI1789586, Length=221, Percent_Identity=26.2443438914027, Blast_Score=67, Evalue=8e-13, Organism=Escherichia coli, GI1787370, Length=218, Percent_Identity=25.6880733944954, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1787547, Length=218, Percent_Identity=27.9816513761468, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1786319, Length=218, Percent_Identity=26.1467889908257, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI1787758, Length=212, Percent_Identity=25.9433962264151, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1786654, Length=229, Percent_Identity=26.6375545851528, Blast_Score=62, Evalue=3e-11, Organism=Escherichia coli, GI1788165, Length=200, Percent_Identity=25, Blast_Score=61, Evalue=8e-11, Organism=Escherichia coli, GI1786653, Length=232, Percent_Identity=25, Blast_Score=61, Evalue=8e-11, Organism=Escherichia coli, GI1788644, Length=199, Percent_Identity=25.6281407035176, Blast_Score=61, Evalue=9e-11, Organism=Caenorhabditis elegans, GI115533608, Length=194, Percent_Identity=30.9278350515464, Blast_Score=96, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17510237, Length=208, Percent_Identity=26.4423076923077, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI71983516, Length=208, Percent_Identity=27.8846153846154, Blast_Score=81, Evalue=4e-16, Organism=Caenorhabditis elegans, GI71983510, Length=208, Percent_Identity=27.8846153846154, Blast_Score=81, Evalue=4e-16, Organism=Caenorhabditis elegans, GI71983523, Length=208, Percent_Identity=27.8846153846154, Blast_Score=81, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17565586, Length=231, Percent_Identity=25.974025974026, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI212646699, Length=200, Percent_Identity=28, Blast_Score=71, Evalue=6e-13, Organism=Caenorhabditis elegans, GI193211017, Length=219, Percent_Identity=27.3972602739726, Blast_Score=70, Evalue=8e-13, Organism=Caenorhabditis elegans, GI71996809, Length=219, Percent_Identity=26.4840182648402, Blast_Score=70, Evalue=9e-13, Organism=Caenorhabditis elegans, GI193211015, Length=219, Percent_Identity=26.4840182648402, Blast_Score=70, Evalue=9e-13, Organism=Caenorhabditis elegans, GI17511077, Length=202, Percent_Identity=27.2277227722772, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71992290, Length=210, Percent_Identity=27.1428571428571, Blast_Score=66, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6320296, Length=187, Percent_Identity=27.2727272727273, Blast_Score=65, Evalue=1e-11, Organism=Drosophila melanogaster, GI24643674, Length=218, Percent_Identity=29.3577981651376, Blast_Score=91, Evalue=6e-19, Organism=Drosophila melanogaster, GI28573571, Length=213, Percent_Identity=27.2300469483568, Blast_Score=84, Evalue=7e-17, Organism=Drosophila melanogaster, GI24648314, Length=216, Percent_Identity=25.462962962963, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI28573573, Length=203, Percent_Identity=28.0788177339901, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI116007184, Length=224, Percent_Identity=29.0178571428571, Blast_Score=80, Evalue=9e-16, Organism=Drosophila melanogaster, GI221500365, Length=224, Percent_Identity=29.0178571428571, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI28571209, Length=202, Percent_Identity=25.2475247524752, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI221512771, Length=212, Percent_Identity=25, Blast_Score=74, Evalue=7e-14, Organism=Drosophila melanogaster, GI24581191, Length=200, Percent_Identity=28, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI24581189, Length=200, Percent_Identity=28, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI24581193, Length=200, Percent_Identity=28, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI24581195, Length=200, Percent_Identity=28, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI28574150, Length=217, Percent_Identity=26.7281105990783, Blast_Score=71, Evalue=6e-13, Organism=Drosophila melanogaster, GI116007328, Length=217, Percent_Identity=26.7281105990783, Blast_Score=71, Evalue=6e-13, Organism=Drosophila melanogaster, GI24666092, Length=207, Percent_Identity=24.1545893719807, Blast_Score=65, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 26641; Mature: 26510
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADLVPLLKAEHLTMRFGGVVANDDITFTLQEMELRCLIGPNGAGKSTFFKTLTGQLVPT CCCCHHHHHHHHEEEEECCEEECCCEEEEEEEEEEEEEECCCCCCCHHHHHHHCCCEECC SGTISFRGMPIAGKASHEIARMGIGIKTQVPNVFNGLSVRENIWLAVRRKATPRQQGPAV CCEEEECCCCCCCCCHHHHHHHCCCCEECCCHHHCCCCCCCCEEEEEECCCCCCCCCCHH DAVLEMIRLTDYADSIVATLSHGQRQWVEIGMVLAAEPELILLDEPAAGMTDEETFHTAA HHHHHHHHHHHHHHHHHHHHHCCHHHHHHEEEEEECCCCEEEEECCCCCCCCCHHHHHHH IIREINQTRAIVVVEHDMEFIKQIAKRVTVFHQGRVLVEDTVDKVLADQRVRDVYLGKKV HHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHC AA CC >Mature Secondary Structure ADLVPLLKAEHLTMRFGGVVANDDITFTLQEMELRCLIGPNGAGKSTFFKTLTGQLVPT CCCHHHHHHHHEEEEECCEEECCCEEEEEEEEEEEEEECCCCCCCHHHHHHHCCCEECC SGTISFRGMPIAGKASHEIARMGIGIKTQVPNVFNGLSVRENIWLAVRRKATPRQQGPAV CCEEEECCCCCCCCCHHHHHHHCCCCEECCCHHHCCCCCCCCEEEEEECCCCCCCCCCHH DAVLEMIRLTDYADSIVATLSHGQRQWVEIGMVLAAEPELILLDEPAAGMTDEETFHTAA HHHHHHHHHHHHHHHHHHHHHCCHHHHHHEEEEEECCCCEEEEECCCCCCCCCHHHHHHH IIREINQTRAIVVVEHDMEFIKQIAKRVTVFHQGRVLVEDTVDKVLADQRVRDVYLGKKV HHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHC AA CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]