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The map label for this gene is scpB [H]

Identifier: 146340977

GI number: 146340977

Start: 4235337

End: 4236506

Strand: Reverse

Name: scpB [H]

Synonym: BRADO4048

Alternate gene names: 146340977

Gene position: 4236506-4235337 (Counterclockwise)

Preceding gene: 146340978

Following gene: 146340976

Centisome position: 56.82

GC content: 67.01

Gene sequence:

>1170_bases
TTGAGTAACGAAGAAGGAGACCCTGCCATGGCTAGCTTGGCGGAACTGCGCATGGAAGAGCCCGACGAGATCGCGACGAG
CGAGCCCGAGGTGCGCCCCGAAGCGTTGCGCATCCTGGAAGCCCTTCTGTTTGCCTCGGCCGAGCCGCTGGAGCAGGCCA
CGCTTGCCAAGCGTATGCCTGATGGTGTCGACATCAAGGCCGCGCTGGCGCAACTGCAGGCGGATTACGCCAATCGCGGC
GTGAATCTCGTACGCGTCGCCAACAAATGGAGCTTCCGCACCGCCGGCGATCTCGCCTGGCTGATGACGCGCGAGAGCAC
CGAGACGCGCAAGCTGTCGCGGGCGGCCATCGAGGTGCTGGCGATCGTCGCCTACCACCAGCCGGTGACGCGCGCCGAAA
TCGAAGAGATCCGCGGCGTGGTGACGTCAAAGGGCACCCTCGACGTTCTCCTGGAGACCGGCTGGATTAAGCCGCGCGGC
CGCCGCAAAACCCCGGGTCGGCCGCTCACCTTCGGTACGACGGATGCGTTCCTCACCCAGTTCAGCCTGGAAACCCTGGG
CGATCTGCCGGGTCTCGAAGAGCTGAAAGGCACGGGCCTGCTGGATTCGCGGCTGCCCACCGGCTTCACCGTCCCAACGC
CATCGGATGATCCGACCTTGCGTGAGGACGAGGAGCCACTGGATCCGGGTGATCTCGATCTGGCGCTGGCACCGGCGGTC
GAGGCTGAGGCGGGTGAGGCGGACGCCGCCGAGGCGGAGGCATCCGAGGACGAGCCGGCCGTCGCCGGGACGAGCCTGGT
CGAAAGCGGTGTGATCGAAACGCTGGCCGGTACGGGCGAGGCGGACGTCGGAGAGGCCGAGGCTGCCGTTCTGGATGACG
AACACGCGTCGCGGCTCGCCGTCGGCGATCTGACGATCTCGGACACGCAGGCGGACGCCGACGCAGCAAGCCTCGAGGTC
GAGGAGCTCGAGGACGAGGAACTCGTCGAGCAGATGGAGGACGAGGAGCTCGCCGCCGAGCAGGACGGCGAGACCGTCGC
CGAATTGGCCGGGGTTTCTGCCGAGGACGAGACGGAGTTCGATGTCGCCGAGGTCGAGTCCGACGAGGTTGAGTCCGACG
AGCACGACCGCGATACCGACGACGATGGCTCCGAGCACCGGGAGGGGTAA

Upstream 100 bases:

>100_bases
GGCAAGCTCGAGTTGAACCAGAAGCAGGCGTTCGCGCCGCTGTATTTTCGGAAGCGTCCACCGAACCAGCCCGGCGCGAT
GGCTGCGCCGGACTTGACGG

Downstream 100 bases:

>100_bases
CGGCCCGCGCGGCCGTTAACACTCGCGTTATTACGTAGCTCCGGCCGCGATTTGGCGGAGCCGAAGTGCTTGTTTTTGCG
GGCGCCGACGCCTACCTTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 388

Protein sequence:

>389_residues
MSNEEGDPAMASLAELRMEEPDEIATSEPEVRPEALRILEALLFASAEPLEQATLAKRMPDGVDIKAALAQLQADYANRG
VNLVRVANKWSFRTAGDLAWLMTRESTETRKLSRAAIEVLAIVAYHQPVTRAEIEEIRGVVTSKGTLDVLLETGWIKPRG
RRKTPGRPLTFGTTDAFLTQFSLETLGDLPGLEELKGTGLLDSRLPTGFTVPTPSDDPTLREDEEPLDPGDLDLALAPAV
EAEAGEADAAEAEASEDEPAVAGTSLVESGVIETLAGTGEADVGEAEAAVLDDEHASRLAVGDLTISDTQADADAASLEV
EELEDEELVEQMEDEELAAEQDGETVAELAGVSAEDETEFDVAEVESDEVESDEHDRDTDDDGSEHREG

Sequences:

>Translated_389_residues
MSNEEGDPAMASLAELRMEEPDEIATSEPEVRPEALRILEALLFASAEPLEQATLAKRMPDGVDIKAALAQLQADYANRG
VNLVRVANKWSFRTAGDLAWLMTRESTETRKLSRAAIEVLAIVAYHQPVTRAEIEEIRGVVTSKGTLDVLLETGWIKPRG
RRKTPGRPLTFGTTDAFLTQFSLETLGDLPGLEELKGTGLLDSRLPTGFTVPTPSDDPTLREDEEPLDPGDLDLALAPAV
EAEAGEADAAEAEASEDEPAVAGTSLVESGVIETLAGTGEADVGEAEAAVLDDEHASRLAVGDLTISDTQADADAASLEV
EELEDEELVEQMEDEELAAEQDGETVAELAGVSAEDETEFDVAEVESDEVESDEHDRDTDDDGSEHREG
>Mature_388_residues
SNEEGDPAMASLAELRMEEPDEIATSEPEVRPEALRILEALLFASAEPLEQATLAKRMPDGVDIKAALAQLQADYANRGV
NLVRVANKWSFRTAGDLAWLMTRESTETRKLSRAAIEVLAIVAYHQPVTRAEIEEIRGVVTSKGTLDVLLETGWIKPRGR
RKTPGRPLTFGTTDAFLTQFSLETLGDLPGLEELKGTGLLDSRLPTGFTVPTPSDDPTLREDEEPLDPGDLDLALAPAVE
AEAGEADAAEAEASEDEPAVAGTSLVESGVIETLAGTGEADVGEAEAAVLDDEHASRLAVGDLTISDTQADADAASLEVE
ELEDEELVEQMEDEELAAEQDGETVAELAGVSAEDETEFDVAEVESDEVESDEHDRDTDDDGSEHREG

Specific function: May participate in chromosomal partitioning during cell division (Potential) [H]

COG id: COG1386

COG function: function code K; Predicted transcriptional regulator containing the HTH domain

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005234
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04079 DUF387 [H]

EC number: NA

Molecular weight: Translated: 41679; Mature: 41547

Theoretical pI: Translated: 3.74; Mature: 3.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNEEGDPAMASLAELRMEEPDEIATSEPEVRPEALRILEALLFASAEPLEQATLAKRMP
CCCCCCCHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCC
DGVDIKAALAQLQADYANRGVNLVRVANKWSFRTAGDLAWLMTRESTETRKLSRAAIEVL
CCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHH
AIVAYHQPVTRAEIEEIRGVVTSKGTLDVLLETGWIKPRGRRKTPGRPLTFGTTDAFLTQ
HHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEECCCHHHHHHH
FSLETLGDLPGLEELKGTGLLDSRLPTGFTVPTPSDDPTLREDEEPLDPGDLDLALAPAV
HHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCC
EAEAGEADAAEAEASEDEPAVAGTSLVESGVIETLAGTGEADVGEAEAAVLDDEHASRLA
CCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCEEE
VGDLTISDTQADADAASLEVEELEDEELVEQMEDEELAAEQDGETVAELAGVSAEDETEF
ECCEEECCCCCCCCHHHCCHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCC
DVAEVESDEVESDEHDRDTDDDGSEHREG
CHHHCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SNEEGDPAMASLAELRMEEPDEIATSEPEVRPEALRILEALLFASAEPLEQATLAKRMP
CCCCCCHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCC
DGVDIKAALAQLQADYANRGVNLVRVANKWSFRTAGDLAWLMTRESTETRKLSRAAIEVL
CCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHH
AIVAYHQPVTRAEIEEIRGVVTSKGTLDVLLETGWIKPRGRRKTPGRPLTFGTTDAFLTQ
HHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEECCCHHHHHHH
FSLETLGDLPGLEELKGTGLLDSRLPTGFTVPTPSDDPTLREDEEPLDPGDLDLALAPAV
HHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCC
EAEAGEADAAEAEASEDEPAVAGTSLVESGVIETLAGTGEADVGEAEAAVLDDEHASRLA
CCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCEEE
VGDLTISDTQADADAASLEVEELEDEELVEQMEDEELAAEQDGETVAELAGVSAEDETEF
ECCEEECCCCCCCCHHHCCHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCC
DVAEVESDEVESDEHDRDTDDDGSEHREG
CHHHCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]