Click here to switch to the map view.

The map label for this gene is tatB

Identifier: 146340975

GI number: 146340975

Start: 4234181

End: 4234717

Strand: Reverse

Name: tatB

Synonym: BRADO4046

Alternate gene names: 146340975

Gene position: 4234717-4234181 (Counterclockwise)

Preceding gene: 146340976

Following gene: 146340974

Centisome position: 56.79

GC content: 66.67

Gene sequence:

>537_bases
ATGTTCGATATCGGCTGGAGTGAACTGCTCGTCATTGGGGTCGTCGCGCTGATTGCGATCGGCCCCAAGGAGCTTCCCGG
CGTTCTGCGCATGGTCGGGCAGTGGATGGGCAAGGCCCGCCGGATGGCCTCGGAGTTTCAGGGCCAGTTCCAGGAGGCCA
TGCGCGAGGCCGAGATGGCCGATCTCAAGAAGAGTTTTGACGAGGTCAAGGAAGCGGCGAGCGGCTTCTCCCCGGCGGGC
ATGATGTCGTCGCTGCAGCGCGACGTCGACAAGGCGCTGGACATCGAGGGTGTCGACAAGCCCGCCGAGCCGGTCATTGC
GACATCGCCGGAGCCGGTTGCTTCGGTCGAAACTCCCGTCACTCCGACGACCCCCGAGCCTCCGCACGCCGAGACCTTCG
TGGAGGCCGAAGCTCATCAGGCCGTCGGCGAGCCGCTGGCCATTGTGCGCGAGATCAAACCCGAGCCGCAGCCGCAGCCC
GCCGATGGCGCCGCGCCGGCCGAGCCCGAACGCCTGAAGGACGCCAAAGCGTCATGA

Upstream 100 bases:

>100_bases
CTGTTGATGCGGCGCGGGCGGCGCGCGCTCCCGCAACTGCGGACCTGCTCGGATGGAGCAGGGCGGGATCAGAGGCGTCG
TCGCGTAGGCGGATTGTTAG

Downstream 100 bases:

>100_bases
CCGTCGAAGATATCGAGGCCAGCAAGGCCCCGCTGATGGACCACCTGATCGAGCTGCGCTCGCGGCTGATCAAGGCGCTG
CTCGGCTTCGGCGTGGCCTT

Product: putative sec-independent protein secretion pathway component TatB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MFDIGWSELLVIGVVALIAIGPKELPGVLRMVGQWMGKARRMASEFQGQFQEAMREAEMADLKKSFDEVKEAASGFSPAG
MMSSLQRDVDKALDIEGVDKPAEPVIATSPEPVASVETPVTPTTPEPPHAETFVEAEAHQAVGEPLAIVREIKPEPQPQP
ADGAAPAEPERLKDAKAS

Sequences:

>Translated_178_residues
MFDIGWSELLVIGVVALIAIGPKELPGVLRMVGQWMGKARRMASEFQGQFQEAMREAEMADLKKSFDEVKEAASGFSPAG
MMSSLQRDVDKALDIEGVDKPAEPVIATSPEPVASVETPVTPTTPEPPHAETFVEAEAHQAVGEPLAIVREIKPEPQPQP
ADGAAPAEPERLKDAKAS
>Mature_178_residues
MFDIGWSELLVIGVVALIAIGPKELPGVLRMVGQWMGKARRMASEFQGQFQEAMREAEMADLKKSFDEVKEAASGFSPAG
MMSSLQRDVDKALDIEGVDKPAEPVIATSPEPVASVETPVTPTTPEPPHAETFVEAEAHQAVGEPLAIVREIKPEPQPQP
ADGAAPAEPERLKDAKAS

Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei

COG id: COG1826

COG function: function code U; Sec-independent protein secretion pathway components

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tatB family

Homologues:

Organism=Escherichia coli, GI48994984, Length=155, Percent_Identity=30.3225806451613, Blast_Score=65, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): TATB_BRASO (A4YV72)

Other databases:

- EMBL:   CU234118
- RefSeq:   YP_001206023.1
- STRING:   A4YV72
- GeneID:   5121194
- GenomeReviews:   CU234118_GR
- KEGG:   bra:BRADO4046
- eggNOG:   COG1826
- HOGENOM:   HBG751935
- OMA:   STNNMLT
- ProtClustDB:   CLSK2392389
- BioCyc:   BSP376:BRADO4046-MONOMER
- HAMAP:   MF_00237
- InterPro:   IPR003369
- InterPro:   IPR018448
- InterPro:   IPR003998
- PRINTS:   PR01506
- TIGRFAMs:   TIGR01410

Pfam domain/function: PF02416 MttA_Hcf106

EC number: NA

Molecular weight: Translated: 19053; Mature: 19053

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1c50bf04)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDIGWSELLVIGVVALIAIGPKELPGVLRMVGQWMGKARRMASEFQGQFQEAMREAEMA
CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLKKSFDEVKEAASGFSPAGMMSSLQRDVDKALDIEGVDKPAEPVIATSPEPVASVETPV
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCC
TPTTPEPPHAETFVEAEAHQAVGEPLAIVREIKPEPQPQPADGAAPAEPERLKDAKAS
CCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCH
>Mature Secondary Structure
MFDIGWSELLVIGVVALIAIGPKELPGVLRMVGQWMGKARRMASEFQGQFQEAMREAEMA
CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLKKSFDEVKEAASGFSPAGMMSSLQRDVDKALDIEGVDKPAEPVIATSPEPVASVETPV
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCC
TPTTPEPPHAETFVEAEAHQAVGEPLAIVREIKPEPQPQPADGAAPAEPERLKDAKAS
CCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA