Click here to switch to the map view.

The map label for this gene is yajC [H]

Identifier: 146340965

GI number: 146340965

Start: 4225900

End: 4226268

Strand: Reverse

Name: yajC [H]

Synonym: BRADO4036

Alternate gene names: 146340965

Gene position: 4226268-4225900 (Counterclockwise)

Preceding gene: 146340966

Following gene: 146340964

Centisome position: 56.68

GC content: 63.41

Gene sequence:

>369_bases
ATGCTGATTACCCCTGCCTATGCCCAGGCCGCCGGCGCTGGCGATACCAACAGCATGCTGATGTCGCTGCTGCCGTTCGC
GCTGATCTTCGTGATCATGTATTTCCTGATCCTGCGGCCGCAGCAGAAGAAGGTCAAAGAGCACGCCGACCTCGTCAAGA
ACGTCCGCCGCGGCGATACCATCGTGACCCAGGGCGGTCTGGTCGGCAAGGTCACCAAGGTGGTCGACGACGACCAGGTC
GAGTTCGAGATCGCCGACGGCGTTCGCGTCCGCCAGATGCGCCAGATGATCACGGGCGTCCGAACCAAGGGCGAGCCCGC
CAAAGCCGACTCGAAGGCCGATGCGAAGGACGAGAAGGCCGCGAGCTGA

Upstream 100 bases:

>100_bases
ATTCCGCGCGAAATTCGCAAGAGGCCGGCCCGCGCCGAGATCAGCGTGGTTCGCCGGCTATTTCCGTCTCACCGGGCACT
GGCCCACGAGGATCGACCGC

Downstream 100 bases:

>100_bases
TCGCGGCCTGGCCGGCGCGCGACGCCGGGCTTTGCCTGATGTTCTGATTTTCCGGGCCGCCCGCGGCCCTTACGGACAAC
CTCCATGTTGTATTTCACGC

Product: preprotein translocase YajC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MLITPAYAQAAGAGDTNSMLMSLLPFALIFVIMYFLILRPQQKKVKEHADLVKNVRRGDTIVTQGGLVGKVTKVVDDDQV
EFEIADGVRVRQMRQMITGVRTKGEPAKADSKADAKDEKAAS

Sequences:

>Translated_122_residues
MLITPAYAQAAGAGDTNSMLMSLLPFALIFVIMYFLILRPQQKKVKEHADLVKNVRRGDTIVTQGGLVGKVTKVVDDDQV
EFEIADGVRVRQMRQMITGVRTKGEPAKADSKADAKDEKAAS
>Mature_122_residues
MLITPAYAQAAGAGDTNSMLMSLLPFALIFVIMYFLILRPQQKKVKEHADLVKNVRRGDTIVTQGGLVGKVTKVVDDDQV
EFEIADGVRVRQMRQMITGVRTKGEPAKADSKADAKDEKAAS

Specific function: Not known; elicits an immunogenic response in mice [H]

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0092 family [H]

Homologues:

Organism=Escherichia coli, GI1786608, Length=95, Percent_Identity=41.0526315789474, Blast_Score=78, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003849 [H]

Pfam domain/function: PF02699 YajC [H]

EC number: NA

Molecular weight: Translated: 13335; Mature: 13335

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLITPAYAQAAGAGDTNSMLMSLLPFALIFVIMYFLILRPQQKKVKEHADLVKNVRRGDT
CCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCE
IVTQGGLVGKVTKVVDDDQVEFEIADGVRVRQMRQMITGVRTKGEPAKADSKADAKDEKA
EEECCCCHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
AS
CC
>Mature Secondary Structure
MLITPAYAQAAGAGDTNSMLMSLLPFALIFVIMYFLILRPQQKKVKEHADLVKNVRRGDT
CCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCE
IVTQGGLVGKVTKVVDDDQVEFEIADGVRVRQMRQMITGVRTKGEPAKADSKADAKDEKA
EEECCCCHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
AS
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9826342 [H]