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The map label for this gene is secF [H]

Identifier: 146340963

GI number: 146340963

Start: 4223180

End: 4224205

Strand: Reverse

Name: secF [H]

Synonym: BRADO4034

Alternate gene names: 146340963

Gene position: 4224205-4223180 (Counterclockwise)

Preceding gene: 146340964

Following gene: 146340962

Centisome position: 56.65

GC content: 62.96

Gene sequence:

>1026_bases
GTGACACACTGGTTTCTCATCGGGCTTGGCATCCTGATCGCGGTGCTGACGGTGGTCAGCGCGCTCGGCCTGCTGCCGTC
GCTGCGCATCGTTCCCGACGACACGCATTTCGACTTCACGCAGTTTCGCCGCATCAGCTTCCCGATCTCGGCGGCGCTGT
CGATCCTGGCGATCGTGCTGTTCTTCACCCATGGCCTCAACCTCGGCATCGACTTCCGCGGCGGCAGCCTGCTCGAGGTG
CGGGCCAAGTCGGGCACCGCCGACATCGCCGGAATGCGCGCGACGCTCTCGACGCTCGGTCTTGGCGAAGTGCAGTTGCA
GCAGTTCGGTGCTGATACCGATGCATCGGTTCTGATCCGTATCGCCGAGCAGCCGGGCGGCGACGCCGCGCAGCAGGAGG
CTGCCAACAAGGTGAAGGCGGCGATCGGTGATTCCGTCGAGTATCGCCGCATCGAGGTCGTGGGCCCGCGTGTCTCCGGT
GAGTTCCTGGCCGTCGGTCTACTCGGCCTCATGCTCGCGATCGTCTCGATCCTGATCTATCTCTGGTTCCGCTTCGAGTG
GCAGTTCGCGCTCGGCGCCATGATCGCCAACGTCCACGACATCGTGCTGACGATCGGCTTCATGTCGATCAGCCAGGTCG
ATTTCGACCTGACCAGCATCGCGGCGCTGCTGACCATTCTCGGCTATTCGCTGAACGACACCGTCGTCATTTACGACCGA
ATCCGCGAGATGCTGCGTCGCTACAAGAAGATGCCGATGCCGCAGCTTCTCAACGAGTCGATCAACTCGACGCTGTCGCG
CTCGATCATCACCCACGTCACGGTGACGCTGGCGCTGCTCGCGCTGCTGTTGTTCGGCGGTCCGGCGATCCACAGCTTCA
CGGCTGTCATGATGTTCGGCGTGGTGCTGGTCGGCACCTACACCTCTATCTTCATCGCGTCTCCGATCCTGATCTATCTC
GGCGTGCACGCGATGCGCGCCGAGGCGCAGGACGACAAGCCGGCGGCGAAAAAGAAAACCCCGTGA

Upstream 100 bases:

>100_bases
TCCTCACCACGGTCTTCACCGCCTTCACGCTGACCCGTCTGATCGTCGCGTGGTGGGTGCGGTGGAAGCGGCCGCAAAGC
GTGCCAATCTAGGAGCTACT

Downstream 100 bases:

>100_bases
TTCGCAGGAAGCTGGCCTTTGGATCATATCCAGAGGCAGCAAGTTGATCTCGGACATGGCCACTGCGAACGACACACCCC
ACTTCCCTCGGTTCGCGCCG

Product: preprotein translocase subunit SecF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 340

Protein sequence:

>341_residues
MTHWFLIGLGILIAVLTVVSALGLLPSLRIVPDDTHFDFTQFRRISFPISAALSILAIVLFFTHGLNLGIDFRGGSLLEV
RAKSGTADIAGMRATLSTLGLGEVQLQQFGADTDASVLIRIAEQPGGDAAQQEAANKVKAAIGDSVEYRRIEVVGPRVSG
EFLAVGLLGLMLAIVSILIYLWFRFEWQFALGAMIANVHDIVLTIGFMSISQVDFDLTSIAALLTILGYSLNDTVVIYDR
IREMLRRYKKMPMPQLLNESINSTLSRSIITHVTVTLALLALLLFGGPAIHSFTAVMMFGVVLVGTYTSIFIASPILIYL
GVHAMRAEAQDDKPAAKKKTP

Sequences:

>Translated_341_residues
MTHWFLIGLGILIAVLTVVSALGLLPSLRIVPDDTHFDFTQFRRISFPISAALSILAIVLFFTHGLNLGIDFRGGSLLEV
RAKSGTADIAGMRATLSTLGLGEVQLQQFGADTDASVLIRIAEQPGGDAAQQEAANKVKAAIGDSVEYRRIEVVGPRVSG
EFLAVGLLGLMLAIVSILIYLWFRFEWQFALGAMIANVHDIVLTIGFMSISQVDFDLTSIAALLTILGYSLNDTVVIYDR
IREMLRRYKKMPMPQLLNESINSTLSRSIITHVTVTLALLALLLFGGPAIHSFTAVMMFGVVLVGTYTSIFIASPILIYL
GVHAMRAEAQDDKPAAKKKTP
>Mature_340_residues
THWFLIGLGILIAVLTVVSALGLLPSLRIVPDDTHFDFTQFRRISFPISAALSILAIVLFFTHGLNLGIDFRGGSLLEVR
AKSGTADIAGMRATLSTLGLGEVQLQQFGADTDASVLIRIAEQPGGDAAQQEAANKVKAAIGDSVEYRRIEVVGPRVSGE
FLAVGLLGLMLAIVSILIYLWFRFEWQFALGAMIANVHDIVLTIGFMSISQVDFDLTSIAALLTILGYSLNDTVVIYDRI
REMLRRYKKMPMPQLLNESINSTLSRSIITHVTVTLALLALLLFGGPAIHSFTAVMMFGVVLVGTYTSIFIASPILIYLG
VHAMRAEAQDDKPAAKKKTP

Specific function: Involved in protein export [H]

COG id: COG0341

COG function: function code U; Preprotein translocase subunit SecF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secD/secF family. SecF subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786610, Length=306, Percent_Identity=36.6013071895425, Blast_Score=204, Evalue=6e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022813
- InterPro:   IPR022646
- InterPro:   IPR022645
- InterPro:   IPR005665 [H]

Pfam domain/function: PF07549 Sec_GG; PF02355 SecD_SecF [H]

EC number: NA

Molecular weight: Translated: 37035; Mature: 36904

Theoretical pI: Translated: 7.26; Mature: 7.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHWFLIGLGILIAVLTVVSALGLLPSLRIVPDDTHFDFTQFRRISFPISAALSILAIVL
CCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHCCCHHHHHHHHHHHH
FFTHGLNLGIDFRGGSLLEVRAKSGTADIAGMRATLSTLGLGEVQLQQFGADTDASVLIR
HHHCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCCEEEEE
IAEQPGGDAAQQEAANKVKAAIGDSVEYRRIEVVGPRVSGEFLAVGLLGLMLAIVSILIY
EECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
LWFRFEWQFALGAMIANVHDIVLTIGFMSISQVDFDLTSIAALLTILGYSLNDTVVIYDR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCEEEHHH
IREMLRRYKKMPMPQLLNESINSTLSRSIITHVTVTLALLALLLFGGPAIHSFTAVMMFG
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
VVLVGTYTSIFIASPILIYLGVHAMRAEAQDDKPAAKKKTP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
THWFLIGLGILIAVLTVVSALGLLPSLRIVPDDTHFDFTQFRRISFPISAALSILAIVL
CHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHCCCHHHHHHHHHHHH
FFTHGLNLGIDFRGGSLLEVRAKSGTADIAGMRATLSTLGLGEVQLQQFGADTDASVLIR
HHHCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCCEEEEE
IAEQPGGDAAQQEAANKVKAAIGDSVEYRRIEVVGPRVSGEFLAVGLLGLMLAIVSILIY
EECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
LWFRFEWQFALGAMIANVHDIVLTIGFMSISQVDFDLTSIAALLTILGYSLNDTVVIYDR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCEEEHHH
IREMLRRYKKMPMPQLLNESINSTLSRSIITHVTVTLALLALLLFGGPAIHSFTAVMMFG
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
VVLVGTYTSIFIASPILIYLGVHAMRAEAQDDKPAAKKKTP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA