Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146340915
Identifier: 146340915
GI number: 146340915
Start: 4177772
End: 4178611
Strand: Reverse
Name: 146340915
Synonym: BRADO3984
Alternate gene names: NA
Gene position: 4178611-4177772 (Counterclockwise)
Preceding gene: 146340916
Following gene: 146340914
Centisome position: 56.04
GC content: 67.14
Gene sequence:
>840_bases ATGAGTGCGGTATTTGAGCCGCAACCCGACATCCTTCTGGTCGATGGCGGCGTGGAGGGCGCCGGTGGCGCCAGTCGATC GATCAGCCTGATGTCGCTCATGCCGGACTACAAGCTGCAGGCAGTCAGGACGCTGGATGAAGCCGACGCCTGCTTGCGCC GGTCCGCCGCCGCGATCGTCGTGCTCAATATTGAAGACCTCAATGGCAGCGGAGGACAGGCGATCGAGAGACTTCGGTCG GCTCAGCCGGACGTTCCGATCATCGTCGTCAACGGTCCTGCCAGCGACGGACTGCGCCGCGCCTATCTTCAAGCCGGCGC GCAGCGCTACATCGCGCAGGTCGAGGTTGGACCCGGCTCGCTGAGCCGCGCGGTGCGGGATCTGACCCGGCGGCGGGCGG GGGCGCTGCTGCGGCAGGAGACGAGAAGGTTGGCTGCGCACGGGACGCGAAGCGACGTCGCTCGGGTCCCGCGCTCCGCT GGCCGTCCTGCACCCACCGAGGCGCTTCGGATCGCGCGACCGGCGCAGTTCGAAGGACTCGTCGATGCCTATGCGGCCCT GTTCGACCGCTACCCCCAAACGTACGCCTCACGGAACCGCAAGCCGGCGCAGATGATGCTGCGTATCGTGAGCTGCCTCG GGGAGTTCCACGGCGGTCCCCGTGACCTCGTGGATATTCACATGGCGGCTTTGCAACGGGTCACCAGCGCGCTGCCCGGC CGGCGCGCCGACGCGCTGGTCGTCGAGAGTCGCCTGCTTGCGTTGGAAATGATGGGTCTGCTGGCGTCGCACTATCGAGA TGCTCATCGCTGCGGCCATTCCGACGGGAGCGGTGCATGA
Upstream 100 bases:
>100_bases GGCGCTGTCTTAGTCGGCCGGCCCGTCGCCCAGCCGCGCGTCGCTTAATGCGAAGGAGCAATGGTGAGTGGCGGCCAGCA GCGCCGAGGAGCTCGGCACC
Downstream 100 bases:
>100_bases CGTACCATCTCGGACTTTTTGTCACCGGACAGACCCTGCATTCGCTGCGCGCGATCGAAAATCTACGCCGCATCTGCGAG CAGGAATTCGCGGGCCTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MSAVFEPQPDILLVDGGVEGAGGASRSISLMSLMPDYKLQAVRTLDEADACLRRSAAAIVVLNIEDLNGSGGQAIERLRS AQPDVPIIVVNGPASDGLRRAYLQAGAQRYIAQVEVGPGSLSRAVRDLTRRRAGALLRQETRRLAAHGTRSDVARVPRSA GRPAPTEALRIARPAQFEGLVDAYAALFDRYPQTYASRNRKPAQMMLRIVSCLGEFHGGPRDLVDIHMAALQRVTSALPG RRADALVVESRLLALEMMGLLASHYRDAHRCGHSDGSGA
Sequences:
>Translated_279_residues MSAVFEPQPDILLVDGGVEGAGGASRSISLMSLMPDYKLQAVRTLDEADACLRRSAAAIVVLNIEDLNGSGGQAIERLRS AQPDVPIIVVNGPASDGLRRAYLQAGAQRYIAQVEVGPGSLSRAVRDLTRRRAGALLRQETRRLAAHGTRSDVARVPRSA GRPAPTEALRIARPAQFEGLVDAYAALFDRYPQTYASRNRKPAQMMLRIVSCLGEFHGGPRDLVDIHMAALQRVTSALPG RRADALVVESRLLALEMMGLLASHYRDAHRCGHSDGSGA >Mature_278_residues SAVFEPQPDILLVDGGVEGAGGASRSISLMSLMPDYKLQAVRTLDEADACLRRSAAAIVVLNIEDLNGSGGQAIERLRSA QPDVPIIVVNGPASDGLRRAYLQAGAQRYIAQVEVGPGSLSRAVRDLTRRRAGALLRQETRRLAAHGTRSDVARVPRSAG RPAPTEALRIARPAQFEGLVDAYAALFDRYPQTYASRNRKPAQMMLRIVSCLGEFHGGPRDLVDIHMAALQRVTSALPGR RADALVVESRLLALEMMGLLASHYRDAHRCGHSDGSGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29980; Mature: 29849
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAVFEPQPDILLVDGGVEGAGGASRSISLMSLMPDYKLQAVRTLDEADACLRRSAAAIV CCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEE VLNIEDLNGSGGQAIERLRSAQPDVPIIVVNGPASDGLRRAYLQAGAQRYIAQVEVGPGS EEEEECCCCCCHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHEECCCHH LSRAVRDLTRRRAGALLRQETRRLAAHGTRSDVARVPRSAGRPAPTEALRIARPAQFEGL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHCCCCCCHHHHHHCCCHHHHHH VDAYAALFDRYPQTYASRNRKPAQMMLRIVSCLGEFHGGPRDLVDIHMAALQRVTSALPG HHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC RRADALVVESRLLALEMMGLLASHYRDAHRCGHSDGSGA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SAVFEPQPDILLVDGGVEGAGGASRSISLMSLMPDYKLQAVRTLDEADACLRRSAAAIV CCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEE VLNIEDLNGSGGQAIERLRSAQPDVPIIVVNGPASDGLRRAYLQAGAQRYIAQVEVGPGS EEEEECCCCCCHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHEECCCHH LSRAVRDLTRRRAGALLRQETRRLAAHGTRSDVARVPRSAGRPAPTEALRIARPAQFEGL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHCCCCCCHHHHHHCCCHHHHHH VDAYAALFDRYPQTYASRNRKPAQMMLRIVSCLGEFHGGPRDLVDIHMAALQRVTSALPG HHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC RRADALVVESRLLALEMMGLLASHYRDAHRCGHSDGSGA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA