Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146340903
Identifier: 146340903
GI number: 146340903
Start: 4160792
End: 4162633
Strand: Direct
Name: 146340903
Synonym: BRADO3971
Alternate gene names: NA
Gene position: 4160792-4162633 (Clockwise)
Preceding gene: 146340902
Following gene: 146340904
Centisome position: 55.8
GC content: 66.61
Gene sequence:
>1842_bases ATGGCAGCCAATACCTTCAACCCGACGGCGCTGGCGAATGGCACGTCCAATCTGCTGGTTCGCGCCTCGGCGTTGAACCT TTCGACCGACCTCGTCCAGGCCGGTGTCGTGTTCAACGACGCCGTTCGCATTTCGACGGGCCTGTTCTCCACACCGCAGA ACAGCGGCAACTCCAATCCTTTCCTCGGCAGCTACACGACCGATCTGCATGCCGTGCAGAACGACATCGCCGCGATGCTG GCCAATCCGGGCCAGGTGACGCTGGGCGGCAAGGCGTTCACGCTCAACGCCACGGACACCGCCGTGTTGACGCAGGTGCA GAACGAGATCACGACGCTGATCAACGCTGCGCCGAACACGACCAATCCCAACACGCTGGCCGAGGCCGACCAGACCATTC ACAACGTGCAGCAGATGATCCTGCAGCAGATCCAGGGCGATGCGCATCTGTCCTCGGCGCTGAACAACGTGCAGTTCCTC GCCAATACCGGCGCAATGGACGTCGCGTTCCAATCGCTTCCCGCAGGCAATGACGGCACGGCCAATCTCGCGGCCGCCAC CGGCGGTGACCTCGCGGCCATCGGCCAGGTCTTCAATGCGGCAGCCGACCTCGCGCTCGGTGGCATCAGCGCCAACACTC TTGGCCAGATCACCGCCGACTTCACCGCGGTCCAGCAGGGCCTGATGGCCATCATCAACGATCCCGCGAAGCTCGCTGCG CTCGAGGCGGGTCAGACCGCCGTCGACGCTCAGACCACGACGCTGCATCTGATGACGCTGGCCGGCCAGATCGGCCTGCA GCTCAACAAGTACGACAGTGCTGAGACCCAGGCTAGTCCGACCGCCCTGCGCGGCACCGCCGACAACATTCTGGACATGA TCGACGTTTTCCAGAACGACGCGACCCTCAACAAGGCCGCGGGCGGAACGGGAACGCCTGGGCATGGCGGCGGCTTCTCG GAAATGCCGGGCGGCCTGACGGGCACGGTGACCCGCTTCCAGGACAACCAGGTTCAGACCAACTTCTGGGCCTCGTTCCT CGCCGAAGCCAATACTCTTGGCGCCAAGCTCAACGCCGTCGCGAACGGCACCGCGACAGCGACCCAGGACATCATCACAC AGATCGCGAACTACCAGAACTTCGGCGTGCAGTTCAACAATGCGCAAGGCGCCGTGTTCCAGGGCCGCTTCGACAACGAG CTCGCCGCGGGCGCGCTGCAGTCCGACTCCGCCATGGCGACCAAGGCGCTGATGGGCATCATGAACGGTGATACCGGCGC CGCGCTGGCGACCGACCAGGCCATGCTCAAGGCCGCAGCGGCCAACTTCATCGGCAATGCCGGCGACATCGGCGGCAACA ACATCGCGATCGGCGGCGTGGACTACGTGGGTTCGGCCACGTCATTCCTGACCGCCACCGCCGTGAACGGCATCGCGATG GGCACGGGCGCGCCGGCAGGCGCCAACCCGAACATCGCCAACGGTACCGGCGGCACGCCTGCGAGCACGACCACGCCGGG CGGCGGCGGGATGGCCGGTGGCGGAGCTGCGGGCGGCGGCGCTGCAGGAGGCGGTGCTGCAGGCGGCGGAGCCGCGGGCG GTGGCACCACCGGCGGAGGCACGACGGGCGGCGGTGCCGCCGGCGGAGGTACGACCGGCGGCAATACCGGCACCGGTAAT AACACCGGCAACAATCAGACGACCACGACGCATCACTGTCACCACCACCATCACAGCCACGACCATCATACGGCGGCGGC AGCTGCGGCTGCCACGGCGGGTGCGGCGGCGGGCGCTGCGGACATGTCGCACCACCACGCGATGCATCACATGTGGGGCT GA
Upstream 100 bases:
>100_bases CCGAGAGGAGTGAACGAGGCGTCGCAGCCCGATCAACGCCCGCGTGCTGCCCAATCCGCCAAGCAGCTGACGCCGGGTTG AAACTTGGGGAGATAATGTG
Downstream 100 bases:
>100_bases GCCCGTCCGCGACGCATTCTCGCTTCCGCCGGCACAGATTGCATCTGTGCCGGCGTTGTCGCTTTCGGGAGCAAGCGATC CCGAGCAGACCGAAGAGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 613; Mature: 612
Protein sequence:
>613_residues MAANTFNPTALANGTSNLLVRASALNLSTDLVQAGVVFNDAVRISTGLFSTPQNSGNSNPFLGSYTTDLHAVQNDIAAML ANPGQVTLGGKAFTLNATDTAVLTQVQNEITTLINAAPNTTNPNTLAEADQTIHNVQQMILQQIQGDAHLSSALNNVQFL ANTGAMDVAFQSLPAGNDGTANLAAATGGDLAAIGQVFNAAADLALGGISANTLGQITADFTAVQQGLMAIINDPAKLAA LEAGQTAVDAQTTTLHLMTLAGQIGLQLNKYDSAETQASPTALRGTADNILDMIDVFQNDATLNKAAGGTGTPGHGGGFS EMPGGLTGTVTRFQDNQVQTNFWASFLAEANTLGAKLNAVANGTATATQDIITQIANYQNFGVQFNNAQGAVFQGRFDNE LAAGALQSDSAMATKALMGIMNGDTGAALATDQAMLKAAAANFIGNAGDIGGNNIAIGGVDYVGSATSFLTATAVNGIAM GTGAPAGANPNIANGTGGTPASTTTPGGGGMAGGGAAGGGAAGGGAAGGGAAGGGTTGGGTTGGGAAGGGTTGGNTGTGN NTGNNQTTTTHHCHHHHHSHDHHTAAAAAAATAGAAAGAADMSHHHAMHHMWG
Sequences:
>Translated_613_residues MAANTFNPTALANGTSNLLVRASALNLSTDLVQAGVVFNDAVRISTGLFSTPQNSGNSNPFLGSYTTDLHAVQNDIAAML ANPGQVTLGGKAFTLNATDTAVLTQVQNEITTLINAAPNTTNPNTLAEADQTIHNVQQMILQQIQGDAHLSSALNNVQFL ANTGAMDVAFQSLPAGNDGTANLAAATGGDLAAIGQVFNAAADLALGGISANTLGQITADFTAVQQGLMAIINDPAKLAA LEAGQTAVDAQTTTLHLMTLAGQIGLQLNKYDSAETQASPTALRGTADNILDMIDVFQNDATLNKAAGGTGTPGHGGGFS EMPGGLTGTVTRFQDNQVQTNFWASFLAEANTLGAKLNAVANGTATATQDIITQIANYQNFGVQFNNAQGAVFQGRFDNE LAAGALQSDSAMATKALMGIMNGDTGAALATDQAMLKAAAANFIGNAGDIGGNNIAIGGVDYVGSATSFLTATAVNGIAM GTGAPAGANPNIANGTGGTPASTTTPGGGGMAGGGAAGGGAAGGGAAGGGAAGGGTTGGGTTGGGAAGGGTTGGNTGTGN NTGNNQTTTTHHCHHHHHSHDHHTAAAAAAATAGAAAGAADMSHHHAMHHMWG >Mature_612_residues AANTFNPTALANGTSNLLVRASALNLSTDLVQAGVVFNDAVRISTGLFSTPQNSGNSNPFLGSYTTDLHAVQNDIAAMLA NPGQVTLGGKAFTLNATDTAVLTQVQNEITTLINAAPNTTNPNTLAEADQTIHNVQQMILQQIQGDAHLSSALNNVQFLA NTGAMDVAFQSLPAGNDGTANLAAATGGDLAAIGQVFNAAADLALGGISANTLGQITADFTAVQQGLMAIINDPAKLAAL EAGQTAVDAQTTTLHLMTLAGQIGLQLNKYDSAETQASPTALRGTADNILDMIDVFQNDATLNKAAGGTGTPGHGGGFSE MPGGLTGTVTRFQDNQVQTNFWASFLAEANTLGAKLNAVANGTATATQDIITQIANYQNFGVQFNNAQGAVFQGRFDNEL AAGALQSDSAMATKALMGIMNGDTGAALATDQAMLKAAAANFIGNAGDIGGNNIAIGGVDYVGSATSFLTATAVNGIAMG TGAPAGANPNIANGTGGTPASTTTPGGGGMAGGGAAGGGAAGGGAAGGGAAGGGTTGGGTTGGGAAGGGTTGGNTGTGNN TGNNQTTTTHHCHHHHHSHDHHTAAAAAAATAGAAAGAADMSHHHAMHHMWG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60262; Mature: 60131
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAANTFNPTALANGTSNLLVRASALNLSTDLVQAGVVFNDAVRISTGLFSTPQNSGNSNP CCCCCCCCCEECCCCCCEEEEEECCCCHHHHHHHCEEECCCEEEECCCCCCCCCCCCCCC FLGSYTTDLHAVQNDIAAMLANPGQVTLGGKAFTLNATDTAVLTQVQNEITTLINAAPNT CCCCCHHHHHHHHHHHHHHHCCCCEEEECCEEEEECCCCHHHHHHHHHHHHHHHHCCCCC TNPNTLAEADQTIHNVQQMILQQIQGDAHLSSALNNVQFLANTGAMDVAFQSLPAGNDGT CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEECCCCHHHHHHHCCCCCCCC ANLAAATGGDLAAIGQVFNAAADLALGGISANTLGQITADFTAVQQGLMAIINDPAKLAA CEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHE LEAGQTAVDAQTTTLHLMTLAGQIGLQLNKYDSAETQASPTALRGTADNILDMIDVFQND ECCCCCEECCCHHEEEEEEHHHHHCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC ATLNKAAGGTGTPGHGGGFSEMPGGLTGTVTRFQDNQVQTNFWASFLAEANTLGAKLNAV CCCHHCCCCCCCCCCCCCHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHH ANGTATATQDIITQIANYQNFGVQFNNAQGAVFQGRFDNELAAGALQSDSAMATKALMGI CCCCCHHHHHHHHHHHCCHHCCEEEECCCCCEEECCCCCHHHHCCCCCCHHHHHHHHHHH MNGDTGAALATDQAMLKAAAANFIGNAGDIGGNNIAIGGVDYVGSATSFLTATAVNGIAM HCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHCCHHHHHHHHHHCCEEE GTGAPAGANPNIANGTGGTPASTTTPGGGGMAGGGAAGGGAAGGGAAGGGAAGGGTTGGG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TTGGGAAGGGTTGGNTGTGNNTGNNQTTTTHHCHHHHHSHDHHTAAAAAAATAGAAAGAA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECHHCCCCCCCHHHHHHHHHHHHCHHCCHH DMSHHHAMHHMWG HHHHHHHHHHCCC >Mature Secondary Structure AANTFNPTALANGTSNLLVRASALNLSTDLVQAGVVFNDAVRISTGLFSTPQNSGNSNP CCCCCCCCEECCCCCCEEEEEECCCCHHHHHHHCEEECCCEEEECCCCCCCCCCCCCCC FLGSYTTDLHAVQNDIAAMLANPGQVTLGGKAFTLNATDTAVLTQVQNEITTLINAAPNT CCCCCHHHHHHHHHHHHHHHCCCCEEEECCEEEEECCCCHHHHHHHHHHHHHHHHCCCCC TNPNTLAEADQTIHNVQQMILQQIQGDAHLSSALNNVQFLANTGAMDVAFQSLPAGNDGT CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEECCCCHHHHHHHCCCCCCCC ANLAAATGGDLAAIGQVFNAAADLALGGISANTLGQITADFTAVQQGLMAIINDPAKLAA CEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHE LEAGQTAVDAQTTTLHLMTLAGQIGLQLNKYDSAETQASPTALRGTADNILDMIDVFQND ECCCCCEECCCHHEEEEEEHHHHHCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC ATLNKAAGGTGTPGHGGGFSEMPGGLTGTVTRFQDNQVQTNFWASFLAEANTLGAKLNAV CCCHHCCCCCCCCCCCCCHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHH ANGTATATQDIITQIANYQNFGVQFNNAQGAVFQGRFDNELAAGALQSDSAMATKALMGI CCCCCHHHHHHHHHHHCCHHCCEEEECCCCCEEECCCCCHHHHCCCCCCHHHHHHHHHHH MNGDTGAALATDQAMLKAAAANFIGNAGDIGGNNIAIGGVDYVGSATSFLTATAVNGIAM HCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHCCHHHHHHHHHHCCEEE GTGAPAGANPNIANGTGGTPASTTTPGGGGMAGGGAAGGGAAGGGAAGGGAAGGGTTGGG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TTGGGAAGGGTTGGNTGTGNNTGNNQTTTTHHCHHHHHSHDHHTAAAAAAATAGAAAGAA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECHHCCCCCCCHHHHHHHHHHHHCHHCCHH DMSHHHAMHHMWG HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA