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The map label for this gene is tibC [H]

Identifier: 146340901

GI number: 146340901

Start: 4154316

End: 4156445

Strand: Direct

Name: tibC [H]

Synonym: BRADO3968

Alternate gene names: 146340901

Gene position: 4154316-4156445 (Clockwise)

Preceding gene: 146340900

Following gene: 146340902

Centisome position: 55.71

GC content: 66.06

Gene sequence:

>2130_bases
ATGACGATTGCAAATTTTCCCCGCGCCTCGGGCGCGACGATGGTGCCGCCAGTTGCGATCCCGCCAGCGGATGGCCGACA
GATGGTCTCGGCCGGTACGGCGGAGCGGCTTGCGAAGCCGCGACTGCCGCCACCAGCGGCCGTTCCGACTCAGGAAGGCC
CCCAGGGGCTTCGGTTCGATTTCAACGACGGTTGCCGGGTGATGCTGCCCGACACCGGACAGGCGTGGCGCGTCCGGCTG
AGCGATCTCGAGACCGCGAATGTCCTGTTCGACATCGAGCTTCGCTCGGGGCACGTCAACAGCAACAAACGATATTTCGT
GCCCTTCAGGCTCGAGGTCTGGTCCGCGCAGACTCTGTTGCTGCGCCACGACTACGACGCCAGCGGGCGCGACATCCTGA
TCCAGTTTCCGATCGGCACCATCGGCGACATCATCGGCTGGCTCGGCTACGCGATGAAGTTCAAGGAGATGCACAAGTGC
CGACTGACCTGCGCGCTGGGCGAGCCGCTGATCGCGCTGTTCCAGGCCGCCTATCCCGACGTCGCCTTCGTCACACACGA
TCAGATTCAGGCTGAGCGCTATTACGCCACCTACTCCGTCGCCCTGTTCTTCGACGACGCCGCCCAGGTGTATCAGCCTT
GCGACTTCCGGCAGGTCGGCCTGCATCGCACTGCAGCCCATATTCTCGGCGTCGATCCGGCGGAACGCCCGCCGCGCGTT
GCGCTCGATGACAACAGCCGACCGATCGCGGAGCCGTATGTCTGCATCGCCGTGCAGGCCACGACCCAATGCAAGCATTG
GAACAATCCTGAAGGCTGGCACAGCCTCGTGGACTTCCTCAAGGCCACCGGCTATCGCGTGATCTGCATCGATCAGAAAG
CGGAGAGCAGCCGCGGCGATTTCCGCACCCGGATTCCCGCTGACGCCGAGGACCAGACCGGCGAACGACCGCTGCGGGAG
CGCGCGCGCTGGCTGCGGCACGCCGACGTCTTCATCGGGCTGTCCTCGGGCCTGTCCTGGCTCGCCTGGGCCGTGGGCAC
GCCCGTGGTGCTGATCAGCGGCTTCACTGATCCGATCAACGAGTTTGCGACGCCTTACCGCGTTATCAATCGGCACGCCT
GCAACAGCTGCTGGAATGATGCGCGTCACCGCTTCGACCACACCGACGCGCTGTGGTGTCCGCGTTGGAAGGACACGCCG
CGGCAGTTCGAATGCACGCGCCTGATCAAGGCTAAGCAGGTCGAAGGCATGTTGCGCAGAGTGCCGGGCTTCGGGCAGGG
ATTGCTCCCCAAGCCGCCCGGGCCGCCGGCGGCGCAGCAGTTGACCCAGCCGACGAACGCTCCGCCGCTCGCCGCGGGTT
TTCCGGGCGCAGCCGGCAAGGATCAGCCGATTGCACTCGCTGCCGTGCTGGCGCAGCCGCGCGGAGAGGTTCCGCATGGC
GGCCTCGCTTCAGGCGTGACCGTGGCCGCCGGCATTTTGCTGGATCAGGCCGCCGCACAGATTTCAGAAGGCGACCGCAA
CGCAAGGGCCAGCGATCTCCCCGGTGCCCTGCAGAACTACAAGCAGAGCATCGATATCGTCCGGCGGCTGACGCAGGCCG
ATCCGGACAATGCCGGCTTCCAGCGCAACCTGTCCGTCGCCTTGAACCGGATCGGCGCCGTGCTGTTCGTTCAGCGCAAT
CTCCAGGGCGCACACGCGGCCTATTCCGCCAGCCTGGCTGTCATCGAGAAACTGACGGCTGCTCATCCCGCCCATCTCAG
CTTCCGCCGCGATCTCGCCTGGTGCCACGCGCTGCTGGCCGACGTGCTCGGGGCCCAGGGCCGCCACGCCGAAGCCTTCG
AGCAGCGTCGCAACAACGCAGCCGTCGTCACGCAGCTCGCCAACGCCGCACCCGACGATTCGCCGTTGCAGCAGGCGCTG
GCAACGTCCTACCAAAATCTTGGCGACGCCTTCCTTCCTCTCGGCAATATCGATGGCGCCCTGACCGTCTACCGGATCAG
CCTCGGCCTGACCAAGCGCGAGCTCGATGCGAACGGGCAGGATCCGGGCTGGAACGCGCTCTACACCAGCCTGCTCCAGA
AGATCCGGGCTGCCCTGCTCGCGCAGCGCCAAGTCGCGCCATCGGCCTGA

Upstream 100 bases:

>100_bases
CCCGTTCTCGATCAGTGGCGCCGTGCCTTCGTGGAGTAACAAGATCTGACATGTCACGGGCTGCGTCCGCAAGGGACGCA
GACCGGCTCGGCCGATCAGC

Downstream 100 bases:

>100_bases
ACGTGGCCTGCAGCTCGGCAAATCACCGCAGACAACTCAATCTGTCAGCACGATGACCGCTCTCCGGCGCACCAGCCGCG
TTACGTGACTGATTGTCACT

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 709; Mature: 708

Protein sequence:

>709_residues
MTIANFPRASGATMVPPVAIPPADGRQMVSAGTAERLAKPRLPPPAAVPTQEGPQGLRFDFNDGCRVMLPDTGQAWRVRL
SDLETANVLFDIELRSGHVNSNKRYFVPFRLEVWSAQTLLLRHDYDASGRDILIQFPIGTIGDIIGWLGYAMKFKEMHKC
RLTCALGEPLIALFQAAYPDVAFVTHDQIQAERYYATYSVALFFDDAAQVYQPCDFRQVGLHRTAAHILGVDPAERPPRV
ALDDNSRPIAEPYVCIAVQATTQCKHWNNPEGWHSLVDFLKATGYRVICIDQKAESSRGDFRTRIPADAEDQTGERPLRE
RARWLRHADVFIGLSSGLSWLAWAVGTPVVLISGFTDPINEFATPYRVINRHACNSCWNDARHRFDHTDALWCPRWKDTP
RQFECTRLIKAKQVEGMLRRVPGFGQGLLPKPPGPPAAQQLTQPTNAPPLAAGFPGAAGKDQPIALAAVLAQPRGEVPHG
GLASGVTVAAGILLDQAAAQISEGDRNARASDLPGALQNYKQSIDIVRRLTQADPDNAGFQRNLSVALNRIGAVLFVQRN
LQGAHAAYSASLAVIEKLTAAHPAHLSFRRDLAWCHALLADVLGAQGRHAEAFEQRRNNAAVVTQLANAAPDDSPLQQAL
ATSYQNLGDAFLPLGNIDGALTVYRISLGLTKRELDANGQDPGWNALYTSLLQKIRAALLAQRQVAPSA

Sequences:

>Translated_709_residues
MTIANFPRASGATMVPPVAIPPADGRQMVSAGTAERLAKPRLPPPAAVPTQEGPQGLRFDFNDGCRVMLPDTGQAWRVRL
SDLETANVLFDIELRSGHVNSNKRYFVPFRLEVWSAQTLLLRHDYDASGRDILIQFPIGTIGDIIGWLGYAMKFKEMHKC
RLTCALGEPLIALFQAAYPDVAFVTHDQIQAERYYATYSVALFFDDAAQVYQPCDFRQVGLHRTAAHILGVDPAERPPRV
ALDDNSRPIAEPYVCIAVQATTQCKHWNNPEGWHSLVDFLKATGYRVICIDQKAESSRGDFRTRIPADAEDQTGERPLRE
RARWLRHADVFIGLSSGLSWLAWAVGTPVVLISGFTDPINEFATPYRVINRHACNSCWNDARHRFDHTDALWCPRWKDTP
RQFECTRLIKAKQVEGMLRRVPGFGQGLLPKPPGPPAAQQLTQPTNAPPLAAGFPGAAGKDQPIALAAVLAQPRGEVPHG
GLASGVTVAAGILLDQAAAQISEGDRNARASDLPGALQNYKQSIDIVRRLTQADPDNAGFQRNLSVALNRIGAVLFVQRN
LQGAHAAYSASLAVIEKLTAAHPAHLSFRRDLAWCHALLADVLGAQGRHAEAFEQRRNNAAVVTQLANAAPDDSPLQQAL
ATSYQNLGDAFLPLGNIDGALTVYRISLGLTKRELDANGQDPGWNALYTSLLQKIRAALLAQRQVAPSA
>Mature_708_residues
TIANFPRASGATMVPPVAIPPADGRQMVSAGTAERLAKPRLPPPAAVPTQEGPQGLRFDFNDGCRVMLPDTGQAWRVRLS
DLETANVLFDIELRSGHVNSNKRYFVPFRLEVWSAQTLLLRHDYDASGRDILIQFPIGTIGDIIGWLGYAMKFKEMHKCR
LTCALGEPLIALFQAAYPDVAFVTHDQIQAERYYATYSVALFFDDAAQVYQPCDFRQVGLHRTAAHILGVDPAERPPRVA
LDDNSRPIAEPYVCIAVQATTQCKHWNNPEGWHSLVDFLKATGYRVICIDQKAESSRGDFRTRIPADAEDQTGERPLRER
ARWLRHADVFIGLSSGLSWLAWAVGTPVVLISGFTDPINEFATPYRVINRHACNSCWNDARHRFDHTDALWCPRWKDTPR
QFECTRLIKAKQVEGMLRRVPGFGQGLLPKPPGPPAAQQLTQPTNAPPLAAGFPGAAGKDQPIALAAVLAQPRGEVPHGG
LASGVTVAAGILLDQAAAQISEGDRNARASDLPGALQNYKQSIDIVRRLTQADPDNAGFQRNLSVALNRIGAVLFVQRNL
QGAHAAYSASLAVIEKLTAAHPAHLSFRRDLAWCHALLADVLGAQGRHAEAFEQRRNNAAVVTQLANAAPDDSPLQQALA
TSYQNLGDAFLPLGNIDGALTVYRISLGLTKRELDANGQDPGWNALYTSLLQKIRAALLAQRQVAPSA

Specific function: Glycosylates the tibA adhesin [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002201 [H]

Pfam domain/function: PF01075 Glyco_transf_9 [H]

EC number: NA

Molecular weight: Translated: 77539; Mature: 77408

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIANFPRASGATMVPPVAIPPADGRQMVSAGTAERLAKPRLPPPAAVPTQEGPQGLRFD
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCEEE
FNDGCRVMLPDTGQAWRVRLSDLETANVLFDIELRSGHVNSNKRYFVPFRLEVWSAQTLL
CCCCCEEEECCCCCEEEEEECCCCEEEEEEEEEEECCCCCCCCEEEEEEEEEECCCEEEE
LRHDYDASGRDILIQFPIGTIGDIIGWLGYAMKFKEMHKCRLTCALGEPLIALFQAAYPD
EEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHCCCC
VAFVTHDQIQAERYYATYSVALFFDDAAQVYQPCDFRQVGLHRTAAHILGVDPAERPPRV
EEEEEHHHHHHHHEEEEEEEEEEECCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCEE
ALDDNSRPIAEPYVCIAVQATTQCKHWNNPEGWHSLVDFLKATGYRVICIDQKAESSRGD
EECCCCCCCCCCEEEEEEEECHHCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCC
FRTRIPADAEDQTGERPLRERARWLRHADVFIGLSSGLSWLAWAVGTPVVLISGFTDPIN
CEECCCCCCCCCCCCCHHHHHHHHHHHHHHEEEHHCCHHHHHHHHCCCEEEEECCCHHHH
EFATPYRVINRHACNSCWNDARHRFDHTDALWCPRWKDTPRQFECTRLIKAKQVEGMLRR
HHCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHH
VPGFGQGLLPKPPGPPAAQQLTQPTNAPPLAAGFPGAAGKDQPIALAAVLAQPRGEVPHG
CCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHCCCCCCCCC
GLASGVTVAAGILLDQAAAQISEGDRNARASDLPGALQNYKQSIDIVRRLTQADPDNAGF
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
QRNLSVALNRIGAVLFVQRNLQGAHAAYSASLAVIEKLTAAHPAHLSFRRDLAWCHALLA
HHHHHHHHHHHCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
DVLGAQGRHAEAFEQRRNNAAVVTQLANAAPDDSPLQQALATSYQNLGDAFLPLGNIDGA
HHHCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHCCCCCCCCC
LTVYRISLGLTKRELDANGQDPGWNALYTSLLQKIRAALLAQRQVAPSA
EEEEEEECCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TIANFPRASGATMVPPVAIPPADGRQMVSAGTAERLAKPRLPPPAAVPTQEGPQGLRFD
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCEEE
FNDGCRVMLPDTGQAWRVRLSDLETANVLFDIELRSGHVNSNKRYFVPFRLEVWSAQTLL
CCCCCEEEECCCCCEEEEEECCCCEEEEEEEEEEECCCCCCCCEEEEEEEEEECCCEEEE
LRHDYDASGRDILIQFPIGTIGDIIGWLGYAMKFKEMHKCRLTCALGEPLIALFQAAYPD
EEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHCCCC
VAFVTHDQIQAERYYATYSVALFFDDAAQVYQPCDFRQVGLHRTAAHILGVDPAERPPRV
EEEEEHHHHHHHHEEEEEEEEEEECCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCEE
ALDDNSRPIAEPYVCIAVQATTQCKHWNNPEGWHSLVDFLKATGYRVICIDQKAESSRGD
EECCCCCCCCCCEEEEEEEECHHCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCC
FRTRIPADAEDQTGERPLRERARWLRHADVFIGLSSGLSWLAWAVGTPVVLISGFTDPIN
CEECCCCCCCCCCCCCHHHHHHHHHHHHHHEEEHHCCHHHHHHHHCCCEEEEECCCHHHH
EFATPYRVINRHACNSCWNDARHRFDHTDALWCPRWKDTPRQFECTRLIKAKQVEGMLRR
HHCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHH
VPGFGQGLLPKPPGPPAAQQLTQPTNAPPLAAGFPGAAGKDQPIALAAVLAQPRGEVPHG
CCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHCCCCCCCCC
GLASGVTVAAGILLDQAAAQISEGDRNARASDLPGALQNYKQSIDIVRRLTQADPDNAGF
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
QRNLSVALNRIGAVLFVQRNLQGAHAAYSASLAVIEKLTAAHPAHLSFRRDLAWCHALLA
HHHHHHHHHHHCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
DVLGAQGRHAEAFEQRRNNAAVVTQLANAAPDDSPLQQALATSYQNLGDAFLPLGNIDGA
HHHCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHCCCCCCCCC
LTVYRISLGLTKRELDANGQDPGWNALYTSLLQKIRAALLAQRQVAPSA
EEEEEEECCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10417177 [H]