Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146340865
Identifier: 146340865
GI number: 146340865
Start: 4111059
End: 4111973
Strand: Reverse
Name: 146340865
Synonym: BRADO3930
Alternate gene names: NA
Gene position: 4111973-4111059 (Counterclockwise)
Preceding gene: 146340866
Following gene: 146340864
Centisome position: 55.15
GC content: 55.85
Gene sequence:
>915_bases ATGAGCATACTTCGCGAAATCCAGGCGGCGATCCTTCAGGAAAATCCAGACCTCGGCACAATACTTCTCAAATTGCGGTT TTTGGCGTCCCGCCTCGGCAGTGAGCCGCTTGAGGATTGGGTTAGGTTTGAAGCTGAGGGATATTCGAAGGAGGCCGTGA CAGTTCCTAGTTATCGAGTAGTGCCGCTGTCGTTCTCCGGCAGTTGGTCCGGTCCTTTTGGTTCTGGCATCCGAAACGCG CCTATTCCGACGTATTTAGTGGAAATGCACGCTGGAAAAGGCTCGGCCGAGAGTAAGATCAGGGAAAGCATTGCGACCGT GCAGGAGATGGCTTCCCGCGAGAGCGGGATAGGGGTCAATGCGTCCAATCTGATCCTGTTGCTGCAAGGCAAGGTTTATG AAGACTACGCTTGTAACGAAATCACTGCCGAAATATCGCAGGTTGCCTTGCGAGAGATCGTGCAGACCGTTAGGGCAAGG ATACTTGAGCTCACCATAGAGCTCGAAAAGCGCGTGCCGGCAGCTGTCGAGGTCACCTTGCATCAGGTGGTAGGCCAGCC AGCCGACAGCGCGGCGACGGTCACTCAGATCTTCAATCAGACGGTCTACGGTAACGTGACGCATGTAACAGCCACCGAGG GCGCTCAAGTAAGCCTCGCGATAGTCGCGGGTGATGCTGTCTCGATGGTGAGTGAGCTTGCTAAAGCTGGATTGCCGGCG GACGCAGCCAAAGAGATCACGGACATAGTTGCTGAGGAAAACCCTCAGAGCGCGGACAAGCCTTTAGGTCCGAAGGCCCT GGCTTGGCTGAAGAAGAATGCGCCGAAGGTCGCGTCGGGAGCTTGGAAGATCGGCTCGGCAGTGGCTACCGATCTGCTCA AAGAGGCGGCTCTGAAGTACTACGGGCTGAAGTGA
Upstream 100 bases:
>100_bases TCCGCGAGAACATAGCGGCTACGCAAAGTCACCGGGCGGCCTTTGGACTTGATGCCGCCTAGCCCCAGCATAGTTTAGCC GCACGGCCGGAGCTTGCCAG
Downstream 100 bases:
>100_bases GCCTTTCCACAGACGCAGCTCGGTGCGTTGCAGAGTTATCGGCAACTGCTTGACTCCGGCACAGGCAATCACTCCCTGAT TCGGAGCAAAGCAATGATCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MSILREIQAAILQENPDLGTILLKLRFLASRLGSEPLEDWVRFEAEGYSKEAVTVPSYRVVPLSFSGSWSGPFGSGIRNA PIPTYLVEMHAGKGSAESKIRESIATVQEMASRESGIGVNASNLILLLQGKVYEDYACNEITAEISQVALREIVQTVRAR ILELTIELEKRVPAAVEVTLHQVVGQPADSAATVTQIFNQTVYGNVTHVTATEGAQVSLAIVAGDAVSMVSELAKAGLPA DAAKEITDIVAEENPQSADKPLGPKALAWLKKNAPKVASGAWKIGSAVATDLLKEAALKYYGLK
Sequences:
>Translated_304_residues MSILREIQAAILQENPDLGTILLKLRFLASRLGSEPLEDWVRFEAEGYSKEAVTVPSYRVVPLSFSGSWSGPFGSGIRNA PIPTYLVEMHAGKGSAESKIRESIATVQEMASRESGIGVNASNLILLLQGKVYEDYACNEITAEISQVALREIVQTVRAR ILELTIELEKRVPAAVEVTLHQVVGQPADSAATVTQIFNQTVYGNVTHVTATEGAQVSLAIVAGDAVSMVSELAKAGLPA DAAKEITDIVAEENPQSADKPLGPKALAWLKKNAPKVASGAWKIGSAVATDLLKEAALKYYGLK >Mature_303_residues SILREIQAAILQENPDLGTILLKLRFLASRLGSEPLEDWVRFEAEGYSKEAVTVPSYRVVPLSFSGSWSGPFGSGIRNAP IPTYLVEMHAGKGSAESKIRESIATVQEMASRESGIGVNASNLILLLQGKVYEDYACNEITAEISQVALREIVQTVRARI LELTIELEKRVPAAVEVTLHQVVGQPADSAATVTQIFNQTVYGNVTHVTATEGAQVSLAIVAGDAVSMVSELAKAGLPAD AAKEITDIVAEENPQSADKPLGPKALAWLKKNAPKVASGAWKIGSAVATDLLKEAALKYYGLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32467; Mature: 32336
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSILREIQAAILQENPDLGTILLKLRFLASRLGSEPLEDWVRFEAEGYSKEAVTVPSYRV CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEECCCEEE VPLSFSGSWSGPFGSGIRNAPIPTYLVEMHAGKGSAESKIRESIATVQEMASRESGIGVN EEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCC ASNLILLLQGKVYEDYACNEITAEISQVALREIVQTVRARILELTIELEKRVPAAVEVTL CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH HQVVGQPADSAATVTQIFNQTVYGNVTHVTATEGAQVSLAIVAGDAVSMVSELAKAGLPA HHHHCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEEEECHHHHHHHHHHHCCCCC DAAKEITDIVAEENPQSADKPLGPKALAWLKKNAPKVASGAWKIGSAVATDLLKEAALKY HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHHH YGLK CCCC >Mature Secondary Structure SILREIQAAILQENPDLGTILLKLRFLASRLGSEPLEDWVRFEAEGYSKEAVTVPSYRV HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEECCCEEE VPLSFSGSWSGPFGSGIRNAPIPTYLVEMHAGKGSAESKIRESIATVQEMASRESGIGVN EEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCC ASNLILLLQGKVYEDYACNEITAEISQVALREIVQTVRARILELTIELEKRVPAAVEVTL CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH HQVVGQPADSAATVTQIFNQTVYGNVTHVTATEGAQVSLAIVAGDAVSMVSELAKAGLPA HHHHCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEEEECHHHHHHHHHHHCCCCC DAAKEITDIVAEENPQSADKPLGPKALAWLKKNAPKVASGAWKIGSAVATDLLKEAALKY HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHHH YGLK CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA