Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146340843
Identifier: 146340843
GI number: 146340843
Start: 4083027
End: 4084340
Strand: Direct
Name: 146340843
Synonym: BRADO3906
Alternate gene names: NA
Gene position: 4083027-4084340 (Clockwise)
Preceding gene: 146340837
Following gene: 146340844
Centisome position: 54.76
GC content: 63.17
Gene sequence:
>1314_bases ATGCGAGTTGCGGTGGTTGGAACAGGAATTGCGGGGAATGCCGCGGCCTGGTCCTTGGCGAAGCGTTATCCGATCACCGT GTACGAGCGCGACATCCGTCCAGGCGGCCACAGCCACACCGTCACGATCGACTATGGCGGCACCCCTGTTTCGGTCGATA TCGGCTTCATCGTCTACAATGAGCTGAATTATCCCGAGTTGACGGCGCTGTTCGATCATCTCGGCGTCGAGACCGTCGAT AGCAGCATGAGCTTCGCCGTCACGGCGGATGCCGGCCGGTTCGAATGGAAGGGCGGCGGCAATACCTGGCTCGACACCGC CAAAGGGCTGTTCGCGCAGCCAAGCAACCTGCTGTCGACGTCATATCTCTGGATGCTGAGGGACATCCTCACCTTCAACG AGCAGAGCACCGCCGACTTCAAGGCCGGCCGCCTGGCGGGGCTCACGCTCGGCGATTATTTTCGCCGCAACCATTTCGCC CCGCGCCTGCTGACCGATTATTTGGCGCCGATGGGCGCCGCGATCTGGTCGGCGCCGGCCTCCGAAATGCTGGATTTTCC GGCTGAAAACTTCGTGGCCTTCTTCAGCAACCATCGCTTGCTGCAATATGACCGTCCGGTCTGGCGTACGGTGAAGGGCG GCAGCCGCAGCTATGTCGACAAGCTGACGGCGAGCTTCCGCAACCATGTCAGGCTTGGCAGCGCCGTCACGCGCATCGAG CGCACATCTCATGGTGTCGTCGTCGAGGATAGCAGTGGTCATCGCGACAGCTATGATCACGTCGTCATCGCGGCTCATAG CGACCAGGCGCTCGCCATGCTTGCCGACGCCGACGAGCACGAGCGCGGCGTGCTCGGTGCGATCAAGTACTCGCCCAACA CGATCTACCTCCACCGCGATGCCAGGCTGATGCCAAAGCGGCGGCGCGCCTGGGCGTCGTGGAATTTCCTGCGCTGGCAG CGCGAGGGCGTTCCGCTGAACGACGTCGCTGTGACCTATTGGATGAACAATCTGCAGGGCATCGACCACGATAAGCCGCT GTTTGTCAGCCTCAACCCTCCCTTCGCTCCGGAGCCGGAACTGACTTTCGGCAAATATGTCTGCGAGCATCCGCAATACA CCGCTGCCGCCTTTGCGGCGCAGAAGCGTCTGGCGGCGATTCAGGGGCAGCGCCACACCTGGTTCTGCGGGGCCTGGACG GGTTATGGTTTCCACGAGGACGGGCTGCGCTCGGGGCTCGCGGTGGCGGAGGCACTCGGCGCGACCGTCCCGTGGCGCGG ACTTCCCGCCGAGCTTGCCGAAGCCGCGGAATAG
Upstream 100 bases:
>100_bases TGTTACGGGCCATTTTGAGCAGGGTGTGACGCGGGGAGCGCGCTCTGAAACCCATTGCTGGCGGCTCCGTAACTTGCACG TGAACTTCAGGGGGGCATTC
Downstream 100 bases:
>100_bases GCACGAAATGGATATCGACCAACCGGGAGATCGAGGCGCGGCGGCCACACTCTACGTCGGCGAGGTGATGCATGCCCGGA TGCGGCCGACGACGCATCGC
Product: hypothetical protein
Products: NA
Alternate protein names: FAD Dependent Oxidoreductase; Amine Oxidase Flavin-Containing; Dehydrogenase; Amine Oxidoreductase; Flavin Containing Amine Oxidoreductase; Flavin-Containing Amine Oxidase; Amino-Oxidase; Oxidoreductase; Amine Oxidase Flavin-Containing Superfamily; FAD-Dependent Oxidoreductase; Amino Oxidase; Flavin Containing Amine Oxidoreductase Protein; Amine Oxidase Flavin-Containing Protein; Amine Oxidase Protein; Amine OxidaseFAD Dependent Oxidoreductase; Amine-Oxidase; Fad Dependent Oxidoreductase; Flavin Containing Amine Oxidoreductas; Lipoprotein
Number of amino acids: Translated: 437; Mature: 437
Protein sequence:
>437_residues MRVAVVGTGIAGNAAAWSLAKRYPITVYERDIRPGGHSHTVTIDYGGTPVSVDIGFIVYNELNYPELTALFDHLGVETVD SSMSFAVTADAGRFEWKGGGNTWLDTAKGLFAQPSNLLSTSYLWMLRDILTFNEQSTADFKAGRLAGLTLGDYFRRNHFA PRLLTDYLAPMGAAIWSAPASEMLDFPAENFVAFFSNHRLLQYDRPVWRTVKGGSRSYVDKLTASFRNHVRLGSAVTRIE RTSHGVVVEDSSGHRDSYDHVVIAAHSDQALAMLADADEHERGVLGAIKYSPNTIYLHRDARLMPKRRRAWASWNFLRWQ REGVPLNDVAVTYWMNNLQGIDHDKPLFVSLNPPFAPEPELTFGKYVCEHPQYTAAAFAAQKRLAAIQGQRHTWFCGAWT GYGFHEDGLRSGLAVAEALGATVPWRGLPAELAEAAE
Sequences:
>Translated_437_residues MRVAVVGTGIAGNAAAWSLAKRYPITVYERDIRPGGHSHTVTIDYGGTPVSVDIGFIVYNELNYPELTALFDHLGVETVD SSMSFAVTADAGRFEWKGGGNTWLDTAKGLFAQPSNLLSTSYLWMLRDILTFNEQSTADFKAGRLAGLTLGDYFRRNHFA PRLLTDYLAPMGAAIWSAPASEMLDFPAENFVAFFSNHRLLQYDRPVWRTVKGGSRSYVDKLTASFRNHVRLGSAVTRIE RTSHGVVVEDSSGHRDSYDHVVIAAHSDQALAMLADADEHERGVLGAIKYSPNTIYLHRDARLMPKRRRAWASWNFLRWQ REGVPLNDVAVTYWMNNLQGIDHDKPLFVSLNPPFAPEPELTFGKYVCEHPQYTAAAFAAQKRLAAIQGQRHTWFCGAWT GYGFHEDGLRSGLAVAEALGATVPWRGLPAELAEAAE >Mature_437_residues MRVAVVGTGIAGNAAAWSLAKRYPITVYERDIRPGGHSHTVTIDYGGTPVSVDIGFIVYNELNYPELTALFDHLGVETVD SSMSFAVTADAGRFEWKGGGNTWLDTAKGLFAQPSNLLSTSYLWMLRDILTFNEQSTADFKAGRLAGLTLGDYFRRNHFA PRLLTDYLAPMGAAIWSAPASEMLDFPAENFVAFFSNHRLLQYDRPVWRTVKGGSRSYVDKLTASFRNHVRLGSAVTRIE RTSHGVVVEDSSGHRDSYDHVVIAAHSDQALAMLADADEHERGVLGAIKYSPNTIYLHRDARLMPKRRRAWASWNFLRWQ REGVPLNDVAVTYWMNNLQGIDHDKPLFVSLNPPFAPEPELTFGKYVCEHPQYTAAAFAAQKRLAAIQGQRHTWFCGAWT GYGFHEDGLRSGLAVAEALGATVPWRGLPAELAEAAE
Specific function: Unknown
COG id: COG2907
COG function: function code R; Predicted NAD/FAD-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48539; Mature: 48539
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVAVVGTGIAGNAAAWSLAKRYPITVYERDIRPGGHSHTVTIDYGGTPVSVDIGFIVYN CEEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCCCEEEEEEECCEEEEEEEEEEEEE ELNYPELTALFDHLGVETVDSSMSFAVTADAGRFEWKGGGNTWLDTAKGLFAQPSNLLST CCCCCHHHHHHHHCCCCEECCCCEEEEEECCCCEEECCCCCHHHHHHCCHHCCCHHHHHH SYLWMLRDILTFNEQSTADFKAGRLAGLTLGDYFRRNHFAPRLLTDYLAPMGAAIWSAPA HHHHHHHHHHHCCCCCCCCCCCCCEEECCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCH SEMLDFPAENFVAFFSNHRLLQYDRPVWRTVKGGSRSYVDKLTASFRNHVRLGSAVTRIE HHHHCCCHHHHHHHHCCCEEEEECCCHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH RTSHGVVVEDSSGHRDSYDHVVIAAHSDQALAMLADADEHERGVLGAIKYSPNTIYLHRD HCCCCEEEECCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCEEEEEEECCCEEEEECC ARLMPKRRRAWASWNFLRWQREGVPLNDVAVTYWMNNLQGIDHDKPLFVSLNPPFAPEPE CCCCCHHHHHHCCCCEEEEECCCCCHHHHEEEEEHHHCCCCCCCCCEEEECCCCCCCCCC LTFGKYVCEHPQYTAAAFAAQKRLAAIQGQRHTWFCGAWTGYGFHEDGLRSGLAVAEALG CCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHC ATVPWRGLPAELAEAAE CCCCCCCCCHHHHHHCC >Mature Secondary Structure MRVAVVGTGIAGNAAAWSLAKRYPITVYERDIRPGGHSHTVTIDYGGTPVSVDIGFIVYN CEEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCCCEEEEEEECCEEEEEEEEEEEEE ELNYPELTALFDHLGVETVDSSMSFAVTADAGRFEWKGGGNTWLDTAKGLFAQPSNLLST CCCCCHHHHHHHHCCCCEECCCCEEEEEECCCCEEECCCCCHHHHHHCCHHCCCHHHHHH SYLWMLRDILTFNEQSTADFKAGRLAGLTLGDYFRRNHFAPRLLTDYLAPMGAAIWSAPA HHHHHHHHHHHCCCCCCCCCCCCCEEECCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCH SEMLDFPAENFVAFFSNHRLLQYDRPVWRTVKGGSRSYVDKLTASFRNHVRLGSAVTRIE HHHHCCCHHHHHHHHCCCEEEEECCCHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH RTSHGVVVEDSSGHRDSYDHVVIAAHSDQALAMLADADEHERGVLGAIKYSPNTIYLHRD HCCCCEEEECCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCEEEEEEECCCEEEEECC ARLMPKRRRAWASWNFLRWQREGVPLNDVAVTYWMNNLQGIDHDKPLFVSLNPPFAPEPE CCCCCHHHHHHCCCCEEEEECCCCCHHHHEEEEEHHHCCCCCCCCCEEEECCCCCCCCCC LTFGKYVCEHPQYTAAAFAAQKRLAAIQGQRHTWFCGAWTGYGFHEDGLRSGLAVAEALG CCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHC ATVPWRGLPAELAEAAE CCCCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA