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The map label for this gene is dcrA [H]

Identifier: 146340816

GI number: 146340816

Start: 4050238

End: 4051500

Strand: Direct

Name: dcrA [H]

Synonym: BRADO3877

Alternate gene names: 146340816

Gene position: 4050238-4051500 (Clockwise)

Preceding gene: 146340814

Following gene: 146340819

Centisome position: 54.32

GC content: 68.41

Gene sequence:

>1263_bases
ATGGCTTTCTTCTCCGGCAAGTCGGCTGATCGCACGCACAACCTGTTGATGACCGAGATGTTCGAACGCCATCGCGACGC
CATCCTGGTGATGTCCGAGGGCAAGATCATCGCCTGCAACGAGACCGCGGTCCGCTTTGGCGGCTTCCGCAGCAAGCAGG
ACCTGCTGTCGCGCTCGCCCGCGACGATGGCTCCGGAGATCCAGCCGAACGGAAAGCGTTCCGCCGACATGGTCAAGGAG
ATGGATGCGAAGGCCAAGCGGGAAGGCCATGCCAGCTTCGAGTGGACGACCAAGCGCGCCGACGGCAGCCCGGCGCTGGT
GCAGATCACGCTGGTGCCGACCACGATCGAAGGCCAGACCTACGTCATGAGCTTCCGCCGCGATCTCTCCGATCTGATCG
CCGCGCGCGAGGAGAAGAAGCGCGCGCTGGACCGGATTGCCAAGGATTTCGAAGCCAGCGTCGGCGCGATCGCCAATGCG
ATCTCCGGCGCCTCGCGCGAGGTGGAGACCACCGCGGCCTCGCTGACGACGACGGCCGATCAGGCGGCGCAGCGCGTCGC
GCTGGTGGCCTCGGCGTCGAGCTCGGCTTCGTCAAACGTGCAGTCGGTCGCCGGCGCGACCGAGGAACTGTCGAGCTCGG
TCAGCGAGATCAACCGCCAGGTCGCGACCTCCTCGACCATCGCCGCCGAGGCGGTCGAGGCCTCCTCCCGCACCAACGAC
CTCGTCAACAGCCTCGCCGACGCCGCCGCCAAGATCGGCGCGGTCACCGACATGATCAATGCGATCGCCAGCCAGACCAA
TCTCCTCGCTCTGAACGCCACGATCGAGGCGGCGCGCGCCGGCGACGCCGGCCGCGGCTTCGCGGTGGTCGCCTCCGAGG
TGAAGAGCCTGTCGAGCCAGACCGCCAAGGCGACGGACGAGATCTCGGCCCATATCAGCGCGATGCAGCGCGCCACCAGC
GATACGGTCGCCGCGATCCAGGGCATCGGCGGCACCATCGGCCAGATCAGCGAGATCGCCAAGACGATCGCGACCGCGGT
CGATCAGCAGGGCCACGCCACGCAGGAGATCGCGCGCTCGGTCAGCCAGGCCGCGAGCGGCACCCGCGAGGTCGCGACCA
ACATCGGCTCGGTCAGCCAGACCGTGGAATCGGCCGGCGGCGCCGCGCGGCAGATGCTCGGCGCGGCCGGGCAGCTCGCC
AAACATGCCGACGAGCTGCGCGGCAAGGTGAAGGACTTCTTGACCGCCGTCGAGGCGGCGTAG

Upstream 100 bases:

>100_bases
AAACAATACGGGAGTGCGACCATGCCGCCGAAAGGTTTTGGTTAATTTTGCCCTGCTACGACTCGCACATTCTTCTCTGA
CAGTGGATTCGGGACCCCCC

Downstream 100 bases:

>100_bases
GACCGATCGCAGGCCTTGAGGTCCGCGATCAGACCCGCTCCGCGACGATGTCGCGGAGCAGCTGTTTGAAACGTGGATAG
GACTTTTTGGAACGACGCGA

Product: putative methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 420; Mature: 419

Protein sequence:

>420_residues
MAFFSGKSADRTHNLLMTEMFERHRDAILVMSEGKIIACNETAVRFGGFRSKQDLLSRSPATMAPEIQPNGKRSADMVKE
MDAKAKREGHASFEWTTKRADGSPALVQITLVPTTIEGQTYVMSFRRDLSDLIAAREEKKRALDRIAKDFEASVGAIANA
ISGASREVETTAASLTTTADQAAQRVALVASASSSASSNVQSVAGATEELSSSVSEINRQVATSSTIAAEAVEASSRTND
LVNSLADAAAKIGAVTDMINAIASQTNLLALNATIEAARAGDAGRGFAVVASEVKSLSSQTAKATDEISAHISAMQRATS
DTVAAIQGIGGTIGQISEIAKTIATAVDQQGHATQEIARSVSQAASGTREVATNIGSVSQTVESAGGAARQMLGAAGQLA
KHADELRGKVKDFLTAVEAA

Sequences:

>Translated_420_residues
MAFFSGKSADRTHNLLMTEMFERHRDAILVMSEGKIIACNETAVRFGGFRSKQDLLSRSPATMAPEIQPNGKRSADMVKE
MDAKAKREGHASFEWTTKRADGSPALVQITLVPTTIEGQTYVMSFRRDLSDLIAAREEKKRALDRIAKDFEASVGAIANA
ISGASREVETTAASLTTTADQAAQRVALVASASSSASSNVQSVAGATEELSSSVSEINRQVATSSTIAAEAVEASSRTND
LVNSLADAAAKIGAVTDMINAIASQTNLLALNATIEAARAGDAGRGFAVVASEVKSLSSQTAKATDEISAHISAMQRATS
DTVAAIQGIGGTIGQISEIAKTIATAVDQQGHATQEIARSVSQAASGTREVATNIGSVSQTVESAGGAARQMLGAAGQLA
KHADELRGKVKDFLTAVEAA
>Mature_419_residues
AFFSGKSADRTHNLLMTEMFERHRDAILVMSEGKIIACNETAVRFGGFRSKQDLLSRSPATMAPEIQPNGKRSADMVKEM
DAKAKREGHASFEWTTKRADGSPALVQITLVPTTIEGQTYVMSFRRDLSDLIAAREEKKRALDRIAKDFEASVGAIANAI
SGASREVETTAASLTTTADQAAQRVALVASASSSASSNVQSVAGATEELSSSVSEINRQVATSSTIAAEAVEASSRTNDL
VNSLADAAAKIGAVTDMINAIASQTNLLALNATIEAARAGDAGRGFAVVASEVKSLSSQTAKATDEISAHISAMQRATSD
TVAAIQGIGGTIGQISEIAKTIATAVDQQGHATQEIARSVSQAASGTREVATNIGSVSQTVESAGGAARQMLGAAGQLAK
HADELRGKVKDFLTAVEAA

Specific function: Receptor For The Attractant L-Aspartate And Related Amino And Dicarboxylic Acids. Tar Also Mediates Taxis To The Attractant Maltose VIa An Interaction With The Periplasmic Maltose Binding Protein. Tar Mediates Taxis Away From The Repellents Cobalt And Ni

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=236, Percent_Identity=29.6610169491525, Blast_Score=89, Evalue=5e-19,
Organism=Escherichia coli, GI1788194, Length=206, Percent_Identity=35.4368932038835, Blast_Score=89, Evalue=5e-19,
Organism=Escherichia coli, GI1789453, Length=209, Percent_Identity=33.9712918660287, Blast_Score=89, Evalue=6e-19,
Organism=Escherichia coli, GI1787690, Length=222, Percent_Identity=33.7837837837838, Blast_Score=89, Evalue=7e-19,
Organism=Escherichia coli, GI2367378, Length=223, Percent_Identity=29.5964125560538, Blast_Score=80, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF00989 PAS [H]

EC number: NA

Molecular weight: Translated: 43603; Mature: 43472

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2 ; PS50192 T_SNARE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFFSGKSADRTHNLLMTEMFERHRDAILVMSEGKIIACNETAVRFGGFRSKQDLLSRSP
CCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCEEEECCHHHHHCCCCCHHHHHCCCC
ATMAPEIQPNGKRSADMVKEMDAKAKREGHASFEWTTKRADGSPALVQITLVPTTIEGQT
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEEEEEEECCHH
YVMSFRRDLSDLIAAREEKKRALDRIAKDFEASVGAIANAISGASREVETTAASLTTTAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
QAAQRVALVASASSSASSNVQSVAGATEELSSSVSEINRQVATSSTIAAEAVEASSRTND
HHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVNSLADAAAKIGAVTDMINAIASQTNLLALNATIEAARAGDAGRGFAVVASEVKSLSSQ
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHCCCCCCCHHHHHHHHHHHHHH
TAKATDEISAHISAMQRATSDTVAAIQGIGGTIGQISEIAKTIATAVDQQGHATQEIARS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH
VSQAASGTREVATNIGSVSQTVESAGGAARQMLGAAGQLAKHADELRGKVKDFLTAVEAA
HHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AFFSGKSADRTHNLLMTEMFERHRDAILVMSEGKIIACNETAVRFGGFRSKQDLLSRSP
CCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCEEEECCHHHHHCCCCCHHHHHCCCC
ATMAPEIQPNGKRSADMVKEMDAKAKREGHASFEWTTKRADGSPALVQITLVPTTIEGQT
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEEEEEEECCHH
YVMSFRRDLSDLIAAREEKKRALDRIAKDFEASVGAIANAISGASREVETTAASLTTTAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
QAAQRVALVASASSSASSNVQSVAGATEELSSSVSEINRQVATSSTIAAEAVEASSRTND
HHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVNSLADAAAKIGAVTDMINAIASQTNLLALNATIEAARAGDAGRGFAVVASEVKSLSSQ
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHCCCCCCCHHHHHHHHHHHHHH
TAKATDEISAHISAMQRATSDTVAAIQGIGGTIGQISEIAKTIATAVDQQGHATQEIARS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH
VSQAASGTREVATNIGSVSQTVESAGGAARQMLGAAGQLAKHADELRGKVKDFLTAVEAA
HHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1548224 [H]