Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146340785
Identifier: 146340785
GI number: 146340785
Start: 4016280
End: 4017167
Strand: Reverse
Name: 146340785
Synonym: BRADO3843
Alternate gene names: NA
Gene position: 4017167-4016280 (Counterclockwise)
Preceding gene: 146340786
Following gene: 146340783
Centisome position: 53.87
GC content: 69.93
Gene sequence:
>888_bases ATGAGCCCTGCGAACGCGCAGGGCGACGCGACGAAGCCGGCCGCAGAGCAACCCGCGGCGGCAGCCGCCGACAAGCCGGC CGAGGCCGAGAAGAAGCCCGCGGCCGATGCCAATTCTGACGCGAAGCCCGATGCCAAGCCGGCGGAGCAGGCAGCCGAGA AGCCCGCCGCTGCCGAGGCGGAGAAGTCGGCGGACAAGCCCGCCGAGCCGGCCACCGCACCGGCGGCGGCTGCCGCCGAC GAGCCCAAGCCCGCGACTGCCCCTCCGGCGGAAAAGGCTGCGGCCGACAAGCCGGCGTCGACCGAGAGCGCTGCCGACGT CAAGCCGGTGGAGTCAAAGGACGAAGGCAATTCCGAAGCCAAGGCGGAGATCAAGGCCGAGCCCAAGCAGGACGTCAAGC AAGAGGTCAAGCAGGAGACCAAGCCGGAGACGGACGCCGGGCAGAAGCCGGCGGTGACCGAGGCGAAGCCTGCCGAGGCC ACGCCGTCGGCCGCCAAAGACGCGACCACGCCGGAGAAGGCAGACGCGAAGCCCGAGGACAAGGCTGCTGAAGCCAGCAA GCCTGCCGTCGCCGCACCCGCCGAGATCAACAAGACCGAGCCTTCAGTGGCCGCACCGGCCGCAGCGGTCCCGTCAGCTC CCGCAGCACCGAAAGCCGCCGCGAAGCCGGAGGCGGCAGGCGTATCGGACAAGGCCGGGACGCACGCCCATCATCATCAC GCGCAGGACGACGACAAGCCGGCCAAGCACAAGCATCACGCGGCCAAGCCGAAGCGCGAGGCGAAGCACCACGCAAGAAG CGCTCGCAACTGCAAGAGCTTCCGCACCTACGACGCGGAGACCGGCAAGTATCGGGGCTATGACGGCAGGCTGCATCGCT GCTCGTGA
Upstream 100 bases:
>100_bases TGATCCACAAGTGAGACCCTTGGCCATGTCAGTATCTGTCGTTCGTTCGCCTGTCGGCCGTCTTTGCGCTGGCGTTTTGT TCTGTCTCCTGGGCGCGGCC
Downstream 100 bases:
>100_bases CGCCAAACGACATCAGCAGCGGCTGCGGCCGCTGCTGAAAGGGTCACCGGCTGGATTGAACTGACGAACGACTCAGCGCG GCAAGGGCGATTGAATGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MSPANAQGDATKPAAEQPAAAAADKPAEAEKKPAADANSDAKPDAKPAEQAAEKPAAAEAEKSADKPAEPATAPAAAAAD EPKPATAPPAEKAAADKPASTESAADVKPVESKDEGNSEAKAEIKAEPKQDVKQEVKQETKPETDAGQKPAVTEAKPAEA TPSAAKDATTPEKADAKPEDKAAEASKPAVAAPAEINKTEPSVAAPAAAVPSAPAAPKAAAKPEAAGVSDKAGTHAHHHH AQDDDKPAKHKHHAAKPKREAKHHARSARNCKSFRTYDAETGKYRGYDGRLHRCS
Sequences:
>Translated_295_residues MSPANAQGDATKPAAEQPAAAAADKPAEAEKKPAADANSDAKPDAKPAEQAAEKPAAAEAEKSADKPAEPATAPAAAAAD EPKPATAPPAEKAAADKPASTESAADVKPVESKDEGNSEAKAEIKAEPKQDVKQEVKQETKPETDAGQKPAVTEAKPAEA TPSAAKDATTPEKADAKPEDKAAEASKPAVAAPAEINKTEPSVAAPAAAVPSAPAAPKAAAKPEAAGVSDKAGTHAHHHH AQDDDKPAKHKHHAAKPKREAKHHARSARNCKSFRTYDAETGKYRGYDGRLHRCS >Mature_294_residues SPANAQGDATKPAAEQPAAAAADKPAEAEKKPAADANSDAKPDAKPAEQAAEKPAAAEAEKSADKPAEPATAPAAAAADE PKPATAPPAEKAAADKPASTESAADVKPVESKDEGNSEAKAEIKAEPKQDVKQEVKQETKPETDAGQKPAVTEAKPAEAT PSAAKDATTPEKADAKPEDKAAEASKPAVAAPAEINKTEPSVAAPAAAVPSAPAAPKAAAKPEAAGVSDKAGTHAHHHHA QDDDKPAKHKHHAAKPKREAKHHARSARNCKSFRTYDAETGKYRGYDGRLHRCS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30103; Mature: 29972
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPANAQGDATKPAAEQPAAAAADKPAEAEKKPAADANSDAKPDAKPAEQAAEKPAAAEA CCCCCCCCCCCCCCHHCCCHHHCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCHHHH EKSADKPAEPATAPAAAAADEPKPATAPPAEKAAADKPASTESAADVKPVESKDEGNSEA HHHCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHH KAEIKAEPKQDVKQEVKQETKPETDAGQKPAVTEAKPAEATPSAAKDATTPEKADAKPED HHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCH KAAEASKPAVAAPAEINKTEPSVAAPAAAVPSAPAAPKAAAKPEAAGVSDKAGTHAHHHH HHHHCCCCCEECCCCCCCCCCCHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCC AQDDDKPAKHKHHAAKPKREAKHHARSARNCKSFRTYDAETGKYRGYDGRLHRCS CCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SPANAQGDATKPAAEQPAAAAADKPAEAEKKPAADANSDAKPDAKPAEQAAEKPAAAEA CCCCCCCCCCCCCHHCCCHHHCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCHHHH EKSADKPAEPATAPAAAAADEPKPATAPPAEKAAADKPASTESAADVKPVESKDEGNSEA HHHCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHH KAEIKAEPKQDVKQEVKQETKPETDAGQKPAVTEAKPAEATPSAAKDATTPEKADAKPED HHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCH KAAEASKPAVAAPAEINKTEPSVAAPAAAVPSAPAAPKAAAKPEAAGVSDKAGTHAHHHH HHHHCCCCCEECCCCCCCCCCCHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCC AQDDDKPAKHKHHAAKPKREAKHHARSARNCKSFRTYDAETGKYRGYDGRLHRCS CCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA