Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146340782
Identifier: 146340782
GI number: 146340782
Start: 4013517
End: 4014803
Strand: Reverse
Name: 146340782
Synonym: BRADO3840
Alternate gene names: NA
Gene position: 4014803-4013517 (Counterclockwise)
Preceding gene: 146340783
Following gene: 146340781
Centisome position: 53.84
GC content: 63.01
Gene sequence:
>1287_bases GTGGGAGACCAAAGTCGCGCTGCCCGTCAGAGGCATAAGGAATCGGGAGGTTTCATGTTTTCGCTCAAGTCGTTCTTACT TGCGAGCTGCGCCACTGCGCTCGTATCGTCGGCCGCCTGGGCCGCTGATCCGATCAGGATCGGCGTCATCGCCGAAGCGC AAGCTGTCGCCGGCTCGTCGATCGCGCCCGCCGCGCAGCTGGCCGCCGAGGAGATCAACGCCAAGGGTGGTATCGACGGA CGCAAGATCGAGATCGTCGTCTACGACAATCATTCCTCTTCGGCGGAATCCGTGCGGGCCTTCCAGCGCGCCGTCAGCGA GGACAAGGTCAACGCGGTCATCGCCAGCTACATCTCCGAGGTCGTGCTGGCGCTGGAGCCGTGGGCAGGGCGCCTCAAGA CCGTGATGATCACACCTGGTGCTGCCTCCGACGTGATCACGCAGAACATCGCCAAGAACTACGACCAGCTGAAATACACC TTCCACGGCTATCTGACCTCGACCTCGCTGGCCGGACTGGTCTGCGATGCGGCCAAGGACCTGCTGGTCGAGCCCTACAA GATGAAGACCGCCGTGATCATGAGCGAGGACGCGGCGTGGACGACGCCGCTCGATGCCGGTTACGAGAAGTGCCTGCCGG AGATCGGGCTGAAGGTCGTCGACCACATCCGGATGTCGCCCGACACCACCGACTTCACGCCGATCTTCAACAAGATCGAG GGCCTGAAGCCGGACGTCATGATCACCGGCATTTCGCATGTCGGCACCCAGCCGACGGTGCAATGGAAGAGCCAGCAGGT GCCGATCCCGATGTTCGGCATCTCCTCGCAGGCGACCAACTCGACGTTCTGGAAGGACACCAACGGTGCCGTCGAAGGCG TCATGTTCAACGCCGTGTCGGGCCCCGGTGTGGCGGTGACGCCGAAGACGCTGCCCTTCGTCGACGCCTATCAGAAGAAG TTCGGCAACATCCCGTCCTACGCCGGCTACACCTCCTATGACGACGTCTACATGATCGCGGATGCGATCCACCGCGCCGG CGGCACCGATCCCGACAAGATGGTCGAGGCGATGGAAGCGACCGACTATGTCGGCACGATCGGCCGTGTGTCCTTCAAAC CGAAGGGCGATCCGAATCCGCACGCGCTGCGCACGGGCAAGGGCTACATCACCGGATTGATGCTGCAGTGGCAGAACGGC AAGCAGGTCAACGTCTGGCCCAAGGAGCTCGCCGCGGGCACCGCCACCTGGCCCTCCTTCATCAAGCTCAAGGCGGCCAG CAACTGA
Upstream 100 bases:
>100_bases CGTCGGTTCGCCCGACGTTTCGCGAGCCATGAGCCGGAAGCTCTATCACAATGCACTGAACGCAGAGCAACGCGTAAGGT GAGGTCTTGCTCGCTGGCAT
Downstream 100 bases:
>100_bases CGCATCGTGGGGCCGCCCGCAAGGGCGGCCCATTTTCTTGATGCATCGGTTTGACGCGCGGATCCATTCTCAATGCTTTT CTGGCAGATCTTGATTGATG
Product: putative branched-chain amino acid ABC transporter substrate-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 428; Mature: 427
Protein sequence:
>428_residues MGDQSRAARQRHKESGGFMFSLKSFLLASCATALVSSAAWAADPIRIGVIAEAQAVAGSSIAPAAQLAAEEINAKGGIDG RKIEIVVYDNHSSSAESVRAFQRAVSEDKVNAVIASYISEVVLALEPWAGRLKTVMITPGAASDVITQNIAKNYDQLKYT FHGYLTSTSLAGLVCDAAKDLLVEPYKMKTAVIMSEDAAWTTPLDAGYEKCLPEIGLKVVDHIRMSPDTTDFTPIFNKIE GLKPDVMITGISHVGTQPTVQWKSQQVPIPMFGISSQATNSTFWKDTNGAVEGVMFNAVSGPGVAVTPKTLPFVDAYQKK FGNIPSYAGYTSYDDVYMIADAIHRAGGTDPDKMVEAMEATDYVGTIGRVSFKPKGDPNPHALRTGKGYITGLMLQWQNG KQVNVWPKELAAGTATWPSFIKLKAASN
Sequences:
>Translated_428_residues MGDQSRAARQRHKESGGFMFSLKSFLLASCATALVSSAAWAADPIRIGVIAEAQAVAGSSIAPAAQLAAEEINAKGGIDG RKIEIVVYDNHSSSAESVRAFQRAVSEDKVNAVIASYISEVVLALEPWAGRLKTVMITPGAASDVITQNIAKNYDQLKYT FHGYLTSTSLAGLVCDAAKDLLVEPYKMKTAVIMSEDAAWTTPLDAGYEKCLPEIGLKVVDHIRMSPDTTDFTPIFNKIE GLKPDVMITGISHVGTQPTVQWKSQQVPIPMFGISSQATNSTFWKDTNGAVEGVMFNAVSGPGVAVTPKTLPFVDAYQKK FGNIPSYAGYTSYDDVYMIADAIHRAGGTDPDKMVEAMEATDYVGTIGRVSFKPKGDPNPHALRTGKGYITGLMLQWQNG KQVNVWPKELAAGTATWPSFIKLKAASN >Mature_427_residues GDQSRAARQRHKESGGFMFSLKSFLLASCATALVSSAAWAADPIRIGVIAEAQAVAGSSIAPAAQLAAEEINAKGGIDGR KIEIVVYDNHSSSAESVRAFQRAVSEDKVNAVIASYISEVVLALEPWAGRLKTVMITPGAASDVITQNIAKNYDQLKYTF HGYLTSTSLAGLVCDAAKDLLVEPYKMKTAVIMSEDAAWTTPLDAGYEKCLPEIGLKVVDHIRMSPDTTDFTPIFNKIEG LKPDVMITGISHVGTQPTVQWKSQQVPIPMFGISSQATNSTFWKDTNGAVEGVMFNAVSGPGVAVTPKTLPFVDAYQKKF GNIPSYAGYTSYDDVYMIADAIHRAGGTDPDKMVEAMEATDYVGTIGRVSFKPKGDPNPHALRTGKGYITGLMLQWQNGK QVNVWPKELAAGTATWPSFIKLKAASN
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 45939; Mature: 45808
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDQSRAARQRHKESGGFMFSLKSFLLASCATALVSSAAWAADPIRIGVIAEAQAVAGSS CCCHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEHHHHCCCC IAPAAQLAAEEINAKGGIDGRKIEIVVYDNHSSSAESVRAFQRAVSEDKVNAVIASYISE CCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VVLALEPWAGRLKTVMITPGAASDVITQNIAKNYDQLKYTFHGYLTSTSLAGLVCDAAKD HHHHHCCCCCCEEEEEECCCCCHHHHHHHHHCCHHHEEEEEEEEEHHHHHHHHHHHHHHH LLVEPYKMKTAVIMSEDAAWTTPLDAGYEKCLPEIGLKVVDHIRMSPDTTDFTPIFNKIE HHCCCHHEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHC GLKPDVMITGISHVGTQPTVQWKSQQVPIPMFGISSQATNSTFWKDTNGAVEGVMFNAVS CCCCCEEEEEHHHCCCCCCEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEECCC GPGVAVTPKTLPFVDAYQKKFGNIPSYAGYTSYDDVYMIADAIHRAGGTDPDKMVEAMEA CCCEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH TDYVGTIGRVSFKPKGDPNPHALRTGKGYITGLMLQWQNGKQVNVWPKELAAGTATWPSF HHHHHCCCEEEECCCCCCCCCEEECCCCEEEEEEEEECCCCEEECCHHHHCCCCCCCCCC IKLKAASN EEEEECCC >Mature Secondary Structure GDQSRAARQRHKESGGFMFSLKSFLLASCATALVSSAAWAADPIRIGVIAEAQAVAGSS CCHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEHHHHCCCC IAPAAQLAAEEINAKGGIDGRKIEIVVYDNHSSSAESVRAFQRAVSEDKVNAVIASYISE CCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VVLALEPWAGRLKTVMITPGAASDVITQNIAKNYDQLKYTFHGYLTSTSLAGLVCDAAKD HHHHHCCCCCCEEEEEECCCCCHHHHHHHHHCCHHHEEEEEEEEEHHHHHHHHHHHHHHH LLVEPYKMKTAVIMSEDAAWTTPLDAGYEKCLPEIGLKVVDHIRMSPDTTDFTPIFNKIE HHCCCHHEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHC GLKPDVMITGISHVGTQPTVQWKSQQVPIPMFGISSQATNSTFWKDTNGAVEGVMFNAVS CCCCCEEEEEHHHCCCCCCEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEECCC GPGVAVTPKTLPFVDAYQKKFGNIPSYAGYTSYDDVYMIADAIHRAGGTDPDKMVEAMEA CCCEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH TDYVGTIGRVSFKPKGDPNPHALRTGKGYITGLMLQWQNGKQVNVWPKELAAGTATWPSF HHHHHCCCEEEECCCCCCCCCEEECCCCEEEEEEEEECCCCEEECCHHHHCCCCCCCCCC IKLKAASN EEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA