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The map label for this gene is nrtC [H]

Identifier: 146340738

GI number: 146340738

Start: 3962787

End: 3963941

Strand: Direct

Name: nrtC [H]

Synonym: BRADO3792

Alternate gene names: 146340738

Gene position: 3962787-3963941 (Clockwise)

Preceding gene: 146340737

Following gene: 146340739

Centisome position: 53.14

GC content: 67.53

Gene sequence:

>1155_bases
ATGACCGGGTCGCTTCGCATTGGCTTCATTCCGCTGGTCGATGCCGCGGCGCTGATCGTCGCCGTCGACAAGGGCTTCAC
GGCCGCCGAAGGGCTCGACGTCACGCTGGTGCGCGAGGTCTCCTGGTCCAACGTCCGCGACAAGCTCAACATCGGCCTGT
TCGATGCCGCGCATCTGCTGGCTCCGGTCGCGATCGCTTCCAGTCTCGGCATCGGCCATGTGAAGGTTCCGATCGTGGCG
CCGTTCAGTCTCGGCGTGAACGGCAACGCGATCACGGTCACGCCGGCGCTGCATGCCGAGCTCATGGCGCATCTCGACGG
CGATCGCTTCGATCCGATGGCCACCGCGCTGGCGCTCTCGCGCGTGGTGGCCGCGCGCCGCAAGGCCGGTGCCGAGCCGC
TGACCTTCGGCATGACGTTTCCGTTCTCGACCCACAACTACCAGCTCCGGTTCTGGATGGCGGCCGGTGGCGTCGATCCA
GACGAGGACGTTCGCTTGGTGGTGCTGCCGCCACCCTACATGGTCGAGAGCATCGCCAACGGTCACGTCGACGCCTTCTG
CGTCGGCGCGCCCTGGAATTCGATCGCCGTCGATCTTGGAATTGGCCACATCCTGCATTTCGTCTCGGACGTCCTGGTCC
GCGCGGCCGAGAAGGTTCTGGCGGTCAGGCAGAGTTGGGCGGACAAGAACCGCGATGCCTTGGCCGCCCTCGTCCGGGCC
TGCGCCCGCGCCGCTGACTTCATCGAGCAGAACCACGACGACGCGGCGCGGGTCCTGGCCCAACCGGAGCGGATCGGCGT
CGACGCCGAGGTGCTCAAGCGAACGCTCGATGGCCGGCTGAAGATCTCGCCGGACGGCACCTTTCGTGACAGCGCTCGCT
ATTTGCTGATCGGCCGCGAGGGGGCGGCGCGGCCGGAAAAGATCCAGGCGGCCTGGCTGTACGCGCAGATGGTCCGCTGG
AGCCAGACGCCGCTCAGCAGCGAAGCGCTGAGCACGGCGATGGGAGTGTTCCGCCCGGATATCTATGATGCGGCGCTTGG
CACCCAGGGGCAGGCCCAGGATGCCGCCATCGGCGCCTTCGCCGGCCCGCCGTTCGCGGCGGACGATGTCCTGGGCCATC
TGAAGGCCTTCAAGATTCGCCGCTGGACGGCCTGA

Upstream 100 bases:

>100_bases
AGGAGGAGGCCTATGTGCTGCTGCGCTCCACGGCGATGCGCGAGAAGAAAAAGATCGGTGAGATCGCGCAGTCGATCCTG
ACCGCCTCGGAGATGCTGAA

Downstream 100 bases:

>100_bases
TTTTTCGTCCGGATAGAAAGCAGGCAGAGCTCTTCGCCGATCAAAAATTGGGCGGGGTGCTCGCGTTTGAGGGCTTGAGG
CCGCCATCGCGGGGCTAATG

Product: putative nitrate transporter component, nrtA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 383

Protein sequence:

>384_residues
MTGSLRIGFIPLVDAAALIVAVDKGFTAAEGLDVTLVREVSWSNVRDKLNIGLFDAAHLLAPVAIASSLGIGHVKVPIVA
PFSLGVNGNAITVTPALHAELMAHLDGDRFDPMATALALSRVVAARRKAGAEPLTFGMTFPFSTHNYQLRFWMAAGGVDP
DEDVRLVVLPPPYMVESIANGHVDAFCVGAPWNSIAVDLGIGHILHFVSDVLVRAAEKVLAVRQSWADKNRDALAALVRA
CARAADFIEQNHDDAARVLAQPERIGVDAEVLKRTLDGRLKISPDGTFRDSARYLLIGREGAARPEKIQAAWLYAQMVRW
SQTPLSSEALSTAMGVFRPDIYDAALGTQGQAQDAAIGAFAGPPFAADDVLGHLKAFKIRRWTA

Sequences:

>Translated_384_residues
MTGSLRIGFIPLVDAAALIVAVDKGFTAAEGLDVTLVREVSWSNVRDKLNIGLFDAAHLLAPVAIASSLGIGHVKVPIVA
PFSLGVNGNAITVTPALHAELMAHLDGDRFDPMATALALSRVVAARRKAGAEPLTFGMTFPFSTHNYQLRFWMAAGGVDP
DEDVRLVVLPPPYMVESIANGHVDAFCVGAPWNSIAVDLGIGHILHFVSDVLVRAAEKVLAVRQSWADKNRDALAALVRA
CARAADFIEQNHDDAARVLAQPERIGVDAEVLKRTLDGRLKISPDGTFRDSARYLLIGREGAARPEKIQAAWLYAQMVRW
SQTPLSSEALSTAMGVFRPDIYDAALGTQGQAQDAAIGAFAGPPFAADDVLGHLKAFKIRRWTA
>Mature_383_residues
TGSLRIGFIPLVDAAALIVAVDKGFTAAEGLDVTLVREVSWSNVRDKLNIGLFDAAHLLAPVAIASSLGIGHVKVPIVAP
FSLGVNGNAITVTPALHAELMAHLDGDRFDPMATALALSRVVAARRKAGAEPLTFGMTFPFSTHNYQLRFWMAAGGVDPD
EDVRLVVLPPPYMVESIANGHVDAFCVGAPWNSIAVDLGIGHILHFVSDVLVRAAEKVLAVRQSWADKNRDALAALVRAC
ARAADFIEQNHDDAARVLAQPERIGVDAEVLKRTLDGRLKISPDGTFRDSARYLLIGREGAARPEKIQAAWLYAQMVRWS
QTPLSSEALSTAMGVFRPDIYDAALGTQGQAQDAAIGAFAGPPFAADDVLGHLKAFKIRRWTA

Specific function: Probably part of a high-affinity binding-protein- dependent transport system for nitrate. Probably responsible for energy coupling to the transport system [H]

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR015168
- InterPro:   IPR005890 [H]

Pfam domain/function: PF00005 ABC_tran; PF09084 NMT1 [H]

EC number: NA

Molecular weight: Translated: 41139; Mature: 41007

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGSLRIGFIPLVDAAALIVAVDKGFTAAEGLDVTLVREVSWSNVRDKLNIGLFDAAHLL
CCCCEEEEEEHHHHHEEEEEEECCCCCCCCCCCEEEEECCCHHCCHHHHCCCHHHHHHHH
APVAIASSLGIGHVKVPIVAPFSLGVNGNAITVTPALHAELMAHLDGDRFDPMATALALS
HHHHHHHHCCCCEEEEEEEEEEEECCCCCEEEECHHHHHHHHHHCCCCCCCHHHHHHHHH
RVVAARRKAGAEPLTFGMTFPFSTHNYQLRFWMAAGGVDPDEDVRLVVLPPPYMVESIAN
HHHHHHHHCCCCCEEEEEECCCCCCCEEEEEEEEECCCCCCCCEEEEEECCCHHHHHHCC
GHVDAFCVGAPWNSIAVDLGIGHILHFVSDVLVRAAEKVLAVRQSWADKNRDALAALVRA
CCCEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
CARAADFIEQNHDDAARVLAQPERIGVDAEVLKRTLDGRLKISPDGTFRDSARYLLIGRE
HHHHHHHHHCCCCHHHHHHCCHHHCCCCHHHHHHHHCCEEEECCCCCCCCCCCEEEEECC
GAARPEKIQAAWLYAQMVRWSQTPLSSEALSTAMGVFRPDIYDAALGTQGQAQDAAIGAF
CCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCCCEEECC
AGPPFAADDVLGHLKAFKIRRWTA
CCCCCCHHHHHHHHHHHHEEECCC
>Mature Secondary Structure 
TGSLRIGFIPLVDAAALIVAVDKGFTAAEGLDVTLVREVSWSNVRDKLNIGLFDAAHLL
CCCEEEEEEHHHHHEEEEEEECCCCCCCCCCCEEEEECCCHHCCHHHHCCCHHHHHHHH
APVAIASSLGIGHVKVPIVAPFSLGVNGNAITVTPALHAELMAHLDGDRFDPMATALALS
HHHHHHHHCCCCEEEEEEEEEEEECCCCCEEEECHHHHHHHHHHCCCCCCCHHHHHHHHH
RVVAARRKAGAEPLTFGMTFPFSTHNYQLRFWMAAGGVDPDEDVRLVVLPPPYMVESIAN
HHHHHHHHCCCCCEEEEEECCCCCCCEEEEEEEEECCCCCCCCEEEEEECCCHHHHHHCC
GHVDAFCVGAPWNSIAVDLGIGHILHFVSDVLVRAAEKVLAVRQSWADKNRDALAALVRA
CCCEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
CARAADFIEQNHDDAARVLAQPERIGVDAEVLKRTLDGRLKISPDGTFRDSARYLLIGRE
HHHHHHHHHCCCCHHHHHHCCHHHCCCCHHHHHHHHCCEEEECCCCCCCCCCCEEEEECC
GAARPEKIQAAWLYAQMVRWSQTPLSSEALSTAMGVFRPDIYDAALGTQGQAQDAAIGAF
CCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCCCEEECC
AGPPFAADDVLGHLKAFKIRRWTA
CCCCCCHHHHHHHHHHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]