| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is tmoC [H]
Identifier: 146340554
GI number: 146340554
Start: 3789295
End: 3789627
Strand: Direct
Name: tmoC [H]
Synonym: BRADO3598
Alternate gene names: 146340554
Gene position: 3789295-3789627 (Clockwise)
Preceding gene: 146340552
Following gene: 146340555
Centisome position: 50.82
GC content: 65.47
Gene sequence:
>333_bases ATGTTCACGCGCGTTTGCAAGGCCGAAACGATCGACGAAGGCGGCATGCGTCTCGTCATCGCCGACGCCCAGCTGATCAT CCTGGCCTGGCCCGACAATGGTGAGCTCAAGGCCTTCCAGGGCGTGTGCCCGCATACCGCCGCGCCGATGGAGGAGGCGG GCTTCGACGGCCGGCTGCTGAGCTGTCCCGTGCACAACTGGACCTGGGACGCACTGACCGGAGAGCCTGTCCATCCGCCG GAGAGCGCCCTGGCCGAGTATCCCCTGAAGGTCGAGGACGGCATCGTCTATATCGACACTGACGGCATCTCGCCGCTGTT TGCGGCGCGTTGA
Upstream 100 bases:
>100_bases GCCATCGTTTTTGACACTCGCCGGCGCGCGATGCGGCCGGAACGAGTCTTGCTCAGTTCGTTGTGGACGATTGCATCGCA AGCCCGAGGAGACGCCCCGC
Downstream 100 bases:
>100_bases GCATGGCTGCCGGCGGCAGGTAAAGACGGTTACGGGCGGCTTGCCCGGGCGGGCAAACGCCTCTATACGTTCGGCGCGCG CGGCGCGGAATCATGGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: Toluene-4-monooxygenase system protein C [H]
Number of amino acids: Translated: 110; Mature: 110
Protein sequence:
>110_residues MFTRVCKAETIDEGGMRLVIADAQLIILAWPDNGELKAFQGVCPHTAAPMEEAGFDGRLLSCPVHNWTWDALTGEPVHPP ESALAEYPLKVEDGIVYIDTDGISPLFAAR
Sequences:
>Translated_110_residues MFTRVCKAETIDEGGMRLVIADAQLIILAWPDNGELKAFQGVCPHTAAPMEEAGFDGRLLSCPVHNWTWDALTGEPVHPP ESALAEYPLKVEDGIVYIDTDGISPLFAAR >Mature_110_residues MFTRVCKAETIDEGGMRLVIADAQLIILAWPDNGELKAFQGVCPHTAAPMEEAGFDGRLLSCPVHNWTWDALTGEPVHPP ESALAEYPLKVEDGIVYIDTDGISPLFAAR
Specific function: Probable electron transfer from NADPH, via FAD and the 2Fe-2S center, to the oxygenase activity site of the enzyme [H]
COG id: COG2146
COG function: function code PR; Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Rieske domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017941 [H]
Pfam domain/function: PF00355 Rieske [H]
EC number: NA
Molecular weight: Translated: 11980; Mature: 11980
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTRVCKAETIDEGGMRLVIADAQLIILAWPDNGELKAFQGVCPHTAAPMEEAGFDGRLL CCCCCCCCCCCCCCCCEEEEECCEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCEEE SCPVHNWTWDALTGEPVHPPESALAEYPLKVEDGIVYIDTDGISPLFAAR ECCCCCCEECCCCCCCCCCCHHHHHHCCEEECCCEEEEECCCCCCCCCCC >Mature Secondary Structure MFTRVCKAETIDEGGMRLVIADAQLIILAWPDNGELKAFQGVCPHTAAPMEEAGFDGRLL CCCCCCCCCCCCCCCCEEEEECCEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCEEE SCPVHNWTWDALTGEPVHPPESALAEYPLKVEDGIVYIDTDGISPLFAAR ECCCCCCEECCCCCCCCCCCHHHHHHCCEEECCCEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1885512 [H]