| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146340523
Identifier: 146340523
GI number: 146340523
Start: 3758813
End: 3759457
Strand: Direct
Name: 146340523
Synonym: BRADO3565
Alternate gene names: NA
Gene position: 3758813-3759457 (Clockwise)
Preceding gene: 146340522
Following gene: 146340524
Centisome position: 50.41
GC content: 62.79
Gene sequence:
>645_bases ATGCGCAAGGCAATGATTGTATGGGGCGGCTGGCCAGGACACGATCCCGATCTCTGTGCCTCGATGATCCGCGGCTGGCT CAAGGCGGAAGGGTTCGAGGTGCGGATCGAGACCTCGACCGCGGCGTTCGCCGATCCCGCGATTCATGATCTGTCGCTGA TCATCCCGATCTACACCATGTCGAAGATCGAAAAGGCTGAGGCTCTCAACCTCTGCGCGGCGGTACGCGGCGGCGTCGGT CTCGCCGGCCATCACGGTGGCATGGGCGACGCGTTCCGCGATTCGGTCGACTACCAGTTCATGTGCGGCGGCCAGTGGGT CGCCCATCCCGGCAACATCATCGACTACCGGGTCGACTTGACCAGGCCGGATGATCCCATCATGAAGGGATTGACGAGTT TCGAGCATCGATCCGAGCAGTATTACATGCATGTCGATCCGGCCAATGAGGTGCTGGCGACCACGACGTTCAGCGCCGAG CACGCGCCCTGGATCGAAGGGGTCGTGATGCCGGTGGTCTGGAAGAAACGGTATGGCGCGGGCAGGGTGTTCTATTCCTC GCTCGGTCATCGCGCCTATGAGCTCGACGTGCCGGAGATCCGCACCCTGATGACCCGCGGCATGCTATGGGCGGCGCGCG CGTGA
Upstream 100 bases:
>100_bases GCCAACGAGGGCCGGCGCGTCAAGATCGAGAGCCGCGTCGAGCGGCCGGCGGCGCTGCCGGCAGGACGCGAAACCGGACA GATCGACTGAGGACAGATAG
Downstream 100 bases:
>100_bases CACCCGGCGCGCCGCCGTCACCCGTCCGCGCGACGCTCGAGGACGTCGCGCGCACGGCCGGCGTGTCGCTCGCCACCGTT GACCGCGTCATCAACCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MRKAMIVWGGWPGHDPDLCASMIRGWLKAEGFEVRIETSTAAFADPAIHDLSLIIPIYTMSKIEKAEALNLCAAVRGGVG LAGHHGGMGDAFRDSVDYQFMCGGQWVAHPGNIIDYRVDLTRPDDPIMKGLTSFEHRSEQYYMHVDPANEVLATTTFSAE HAPWIEGVVMPVVWKKRYGAGRVFYSSLGHRAYELDVPEIRTLMTRGMLWAARA
Sequences:
>Translated_214_residues MRKAMIVWGGWPGHDPDLCASMIRGWLKAEGFEVRIETSTAAFADPAIHDLSLIIPIYTMSKIEKAEALNLCAAVRGGVG LAGHHGGMGDAFRDSVDYQFMCGGQWVAHPGNIIDYRVDLTRPDDPIMKGLTSFEHRSEQYYMHVDPANEVLATTTFSAE HAPWIEGVVMPVVWKKRYGAGRVFYSSLGHRAYELDVPEIRTLMTRGMLWAARA >Mature_214_residues MRKAMIVWGGWPGHDPDLCASMIRGWLKAEGFEVRIETSTAAFADPAIHDLSLIIPIYTMSKIEKAEALNLCAAVRGGVG LAGHHGGMGDAFRDSVDYQFMCGGQWVAHPGNIIDYRVDLTRPDDPIMKGLTSFEHRSEQYYMHVDPANEVLATTTFSAE HAPWIEGVVMPVVWKKRYGAGRVFYSSLGHRAYELDVPEIRTLMTRGMLWAARA
Specific function: Unknown
COG id: COG3828
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23826; Mature: 23826
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKAMIVWGGWPGHDPDLCASMIRGWLKAEGFEVRIETSTAAFADPAIHDLSLIIPIYTM CCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHEEEEHHHHH SKIEKAEALNLCAAVRGGVGLAGHHGGMGDAFRDSVDYQFMCGGQWVAHPGNIIDYRVDL HHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHCCCCEEEEECCEEEECCCCEEEEEEEC TRPDDPIMKGLTSFEHRSEQYYMHVDPANEVLATTTFSAEHAPWIEGVVMPVVWKKRYGA CCCCCHHHHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCCCHHHCEEHHHHHHHHCCC GRVFYSSLGHRAYELDVPEIRTLMTRGMLWAARA CHHHHHHCCCEEEECCCHHHHHHHHHCCEEECCC >Mature Secondary Structure MRKAMIVWGGWPGHDPDLCASMIRGWLKAEGFEVRIETSTAAFADPAIHDLSLIIPIYTM CCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHEEEEHHHHH SKIEKAEALNLCAAVRGGVGLAGHHGGMGDAFRDSVDYQFMCGGQWVAHPGNIIDYRVDL HHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHCCCCEEEEECCEEEECCCCEEEEEEEC TRPDDPIMKGLTSFEHRSEQYYMHVDPANEVLATTTFSAEHAPWIEGVVMPVVWKKRYGA CCCCCHHHHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCCCHHHCEEHHHHHHHHCCC GRVFYSSLGHRAYELDVPEIRTLMTRGMLWAARA CHHHHHHCCCEEEECCCHHHHHHHHHCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA